RNA–Protein interactions for RNA: ENST00000552338.5

LIMA1-211, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-211ENST00000552338 NSG2Q9Y328 171 aa7.56□□□□□ -1.2
LIMA1-211ENST00000552338 WSB1Q9Y6I7 421 aa7.56□□□□□ -1.2
LIMA1-211ENST00000552338 IGLC7A0M8Q6 106 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 NPIPB5A8MRT5 1133 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 TRIM77I1YAP6 450 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 K7EPK0 472 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 TCF21O43680 179 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 ACTL6BO94805 426 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 NDUFA7O95182 113 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 MPC2O95563 127 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 CTRB1P17538 263 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 PPIFP30405 207 aaKnown RBP7.55□□□□□ -1.2
LIMA1-211ENST00000552338 PAX9P55771 341 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 NDPQ00604 133 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 RAB32Q13637 225 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 FXYD3Q14802 87 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 PLGLAQ15195 96 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 TNXAQ16473 311 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 CTRB2Q6GPI1 263 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 TMEM65Q6PI78 240 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 MRPL41Q8IXM3 137 aaKnown RBP7.55□□□□□ -1.2
LIMA1-211ENST00000552338 OR2C3Q8N628 320 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 WDR89Q96FK6 387 aaPredicted RBP7.55□□□□□ -1.2
LIMA1-211ENST00000552338 HSPB9Q9BQS6 159 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 PDCD10Q9BUL8 212 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 ZNF702PQ9H963 129 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 RCL1Q9Y2P8 373 aaKnown RBP7.55□□□□□ -1.2
LIMA1-211ENST00000552338 U3KQ87 197 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 CUBNO60494 3623 aa7.55□□□□□ -1.2
LIMA1-211ENST00000552338 TRAV14DV4A0A0A6YYC5 116 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 TMEM89A2RUT3 159 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 H0YIZ8 118 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 H3BUA1 57 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 TSC22D2O75157 780 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 RLN2P04090 185 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 PET100P0DJ07 73 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 CFHR3Q02985 330 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 TMEM267Q0VDI3 215 aaPredicted RBP7.54□□□□□ -1.2
LIMA1-211ENST00000552338 ASPHD1Q5U4P2 390 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 C11orf87Q6NUJ2 197 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 PRSS54Q6PEW0 395 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 OR1L6Q8NGR2 347 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 DTD1Q8TEA8 209 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 WIPF2Q8TF74 440 aaPredicted RBP7.54□□□□□ -1.2
LIMA1-211ENST00000552338 ARPC1AQ92747 370 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 WNT10AQ9GZT5 417 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 RBKSQ9H477 322 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 RANGRFQ9HD47 186 aaPredicted RBP7.54□□□□□ -1.2
LIMA1-211ENST00000552338 GSKIPQ9P0R6 139 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 FBXO7Q9Y3I1 522 aa7.54□□□□□ -1.2
LIMA1-211ENST00000552338 FAM181BA6NEQ2 426 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 MSGN1A6NI15 193 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 LINC01548A6NM66 108 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 HMSDA8MTL9 139 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 FAM25EA8MYX2 175 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 E5RGE8 158 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 AP4M1O00189 453 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 ATP6V0E1O15342 81 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 CCNKO75909 580 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 SCAF4O95104 1147 aaKnown RBP7.53□□□□□ -1.2
LIMA1-211ENST00000552338 TMEM50AO95807 157 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 IFNA17P01571 189 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 MYOD1P15172 320 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 HTR2BP41595 481 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 P2RY1P47900 373 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 POLR2GP62487 172 aaKnown RBP eCLIP7.53□□□□□ -1.2
LIMA1-211ENST00000552338 ERHP84090 104 aaKnown RBP7.53□□□□□ -1.2
LIMA1-211ENST00000552338 WT1-ASQ06250 92 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 C2orf83Q53S99 150 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 TMEM14EPQ6UXP3 125 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 Q6ZS46 218 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 Q6ZSV7 163 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 SLC35E3Q7Z769 313 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 AKAP14Q86UN6 197 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 NOXA1Q86UR1 476 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 OR2T35Q8NGX2 323 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 PPP1R14BQ96C90 147 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 CLCC1Q96S66 551 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 GON7Q9BXV9 100 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 HIPK2Q9H2X6 1198 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 PLEKHA3Q9HB20 300 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 SERTAD4Q9NUC0 356 aa7.53□□□□□ -1.2
LIMA1-211ENST00000552338 hCG_2014768A0A024R1R8 64 aa7.52□□□□□ -1.21
LIMA1-211ENST00000552338 TRBV9A0A0B4J1U6 114 aa7.52□□□□□ -1.21
LIMA1-211ENST00000552338 PMS2P5A8MQ11 134 aa7.52□□□□□ -1.21
LIMA1-211ENST00000552338 RBMXL2O75526 392 aaKnown RBP7.52□□□□□ -1.21
LIMA1-211ENST00000552338 CNIH1O95406 144 aa7.52□□□□□ -1.21
LIMA1-211ENST00000552338 IGLV1-40P01703 118 aa7.52□□□□□ -1.21
LIMA1-211ENST00000552338 C1QBP02746 253 aa7.52□□□□□ -1.21
LIMA1-211ENST00000552338 RNASE2P10153 161 aaKnown RBP7.52□□□□□ -1.21
LIMA1-211ENST00000552338 PVALBP20472 110 aaPredicted RBP7.52□□□□□ -1.21
LIMA1-211ENST00000552338 RPP30P78346 268 aaKnown RBP7.52□□□□□ -1.21
LIMA1-211ENST00000552338 CD83Q01151 205 aa7.52□□□□□ -1.21
LIMA1-211ENST00000552338 Q5BKY6 102 aa7.52□□□□□ -1.21
LIMA1-211ENST00000552338 C10orf55Q5SWW7 151 aa7.52□□□□□ -1.21
LIMA1-211ENST00000552338 STPG2Q8N412 459 aa7.52□□□□□ -1.21
LIMA1-211ENST00000552338 RNF152Q8N8N0 203 aa7.52□□□□□ -1.21
LIMA1-211ENST00000552338 OR10W1Q8NGF6 305 aa7.52□□□□□ -1.21
LIMA1-211ENST00000552338 OR1P1Q8NH06 330 aa7.52□□□□□ -1.21
LIMA1-211ENST00000552338 FAM110DQ8TAY7 271 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms