RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 WFIKKN1Q96NZ8 548 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 IMMP2LQ96T52 175 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 FKBP11Q9NYL4 201 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 YTHDF2Q9Y5A9 579 aaKnown RBP10.72□□□□□ -0.69
CACNB3-219ENST00000551544 DSCAMO60469 2012 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 KBTBD11-OT1A0A1B0GTJ5 212 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 MDFIC2A0A1B0GVS7 189 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 CGB3P0DN86 165 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 CGB7P0DN87 165 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 CD99P14209 185 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 TIMM23BQ5SRD1 257 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 TEPPQ6URK8 271 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 SGMS2Q8NHU3 365 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 LSM4Q9Y4Z0 139 aaKnown RBP10.71□□□□□ -0.69
CACNB3-219ENST00000551544 TRAPPC1Q9Y5R8 145 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 TRGV10A0A0A0MS01 117 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 TRGV8A0A0C4DH27 118 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 FOXH1O75593 365 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 TDGF1P3P51864 188 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 RPL15P61313 204 aaKnown RBP10.71□□□□□ -0.69
CACNB3-219ENST00000551544 HSPE1P61604 102 aaKnown RBP10.71□□□□□ -0.69
CACNB3-219ENST00000551544 EFNB3Q15768 340 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 FAM122AQ96E09 287 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 CCL13Q99616 98 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 ATG101Q9BSB4 218 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 PARD6AQ9NPB6 346 aa10.71□□□□□ -0.69
CACNB3-219ENST00000551544 ACTL6BO94805 426 aa10.71□□□□□ -0.7
CACNB3-219ENST00000551544 GCHFRP30047 84 aa10.71□□□□□ -0.7
CACNB3-219ENST00000551544 THBS3P49746 956 aa10.71□□□□□ -0.7
CACNB3-219ENST00000551544 IDI2-AS1Q9NZ38 188 aa10.71□□□□□ -0.7
CACNB3-219ENST00000551544 ZNRD1Q9P1U0 126 aa10.71□□□□□ -0.7
CACNB3-219ENST00000551544 RNF7Q9UBF6 113 aa10.71□□□□□ -0.7
CACNB3-219ENST00000551544 IGFBP2P18065 325 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 OR10J1P30954 320 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 TNFAIP6P98066 277 aaPredicted RBP10.7□□□□□ -0.7
CACNB3-219ENST00000551544 FAM216BQ8N7L0 139 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 OR4P4Q8NGL7 312 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 OCC1Q8TAD7 63 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 FAM216AQ8WUB2 273 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 GCM1Q9NP62 436 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 CBLN4Q9NTU7 201 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 TMEM14BQ9NUH8 114 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 FOXA2Q9Y261 457 aaPredicted RBP10.7□□□□□ -0.7
CACNB3-219ENST00000551544 POLR3KQ9Y2Y1 108 aaPredicted RBP10.7□□□□□ -0.7
CACNB3-219ENST00000551544 FAM215AQ9Y5M1 114 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 OR51B2Q9Y5P1 312 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 M0QZK8 103 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 MMP23AO75900 390 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 G0S2P27469 103 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 RHOBP62745 196 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 RAB31Q13636 194 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 COTL1Q14019 142 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 TCF23Q7RTU1 214 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 TMEM144Q7Z5S9 345 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 SNRNP40Q96DI7 357 aaKnown RBP10.7□□□□□ -0.7
CACNB3-219ENST00000551544 NAGKQ9UJ70 344 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 MAP1BP46821 2468 aaKnown RBP10.7□□□□□ -0.7
CACNB3-219ENST00000551544 TTC28Q96AY4 2481 aa10.7□□□□□ -0.7
CACNB3-219ENST00000551544 PLCE1Q9P212 2302 aa10.69□□□□□ -0.7
CACNB3-219ENST00000551544 OTOGLQ3ZCN5 2332 aa10.69□□□□□ -0.7
CACNB3-219ENST00000551544 A0A1B0GUS0 222 aa10.69□□□□□ -0.7
CACNB3-219ENST00000551544 SCGB1D1O95968 90 aa10.69□□□□□ -0.7
CACNB3-219ENST00000551544 RPL31P62899 125 aaKnown RBP10.69□□□□□ -0.7
CACNB3-219ENST00000551544 C22orf34Q6ZV56 151 aa10.69□□□□□ -0.7
CACNB3-219ENST00000551544 ZCCHC14Q8WYQ9 949 aaKnown RBP10.69□□□□□ -0.7
CACNB3-219ENST00000551544 TXNDC17Q9BRA2 123 aa10.69□□□□□ -0.7
CACNB3-219ENST00000551544 LRFN3Q9BTN0 628 aa10.69□□□□□ -0.7
CACNB3-219ENST00000551544 RAB9BQ9NP90 201 aa10.69□□□□□ -0.7
CACNB3-219ENST00000551544 YLPM1P49750 1951 aaKnown RBP10.69□□□□□ -0.7
CACNB3-219ENST00000551544 IGLV3-9A0A075B6K5 115 aa10.68□□□□□ -0.7
CACNB3-219ENST00000551544 IGHV1-46P01743 117 aa10.68□□□□□ -0.7
CACNB3-219ENST00000551544 SELENOVP59797 346 aa10.68□□□□□ -0.7
CACNB3-219ENST00000551544 FAM27E3Q08E93 113 aa10.68□□□□□ -0.7
CACNB3-219ENST00000551544 FOXL1Q12952 345 aa10.68□□□□□ -0.7
CACNB3-219ENST00000551544 MOB3BQ86TA1 216 aa10.68□□□□□ -0.7
CACNB3-219ENST00000551544 OR10G8Q8NGN5 311 aa10.68□□□□□ -0.7
CACNB3-219ENST00000551544 GAFA1Q96PS6 74 aa10.68□□□□□ -0.7
CACNB3-219ENST00000551544 ELOVL5Q9NYP7 299 aa10.68□□□□□ -0.7
CACNB3-219ENST00000551544 TNCP24821 2201 aa10.68□□□□□ -0.7
CACNB3-219ENST00000551544 J3QR06 171 aa10.68□□□□□ -0.7
CACNB3-219ENST00000551544 ITGB1BP1O14713 200 aa10.68□□□□□ -0.7
CACNB3-219ENST00000551544 IGKV1-16P04430 117 aa10.68□□□□□ -0.7
CACNB3-219ENST00000551544 STUMQ69YW2 141 aa10.68□□□□□ -0.7
CACNB3-219ENST00000551544 MIR17HGQ75NE6 70 aa10.68□□□□□ -0.7
CACNB3-219ENST00000551544 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.68□□□□□ -0.7
CACNB3-219ENST00000551544 RND1Q92730 232 aa10.68□□□□□ -0.7
CACNB3-219ENST00000551544 PLEKHA3Q9HB20 300 aa10.68□□□□□ -0.7
CACNB3-219ENST00000551544 SLC17A3O00476 420 aa10.67□□□□□ -0.7
CACNB3-219ENST00000551544 TIMP3P35625 211 aa10.67□□□□□ -0.7
CACNB3-219ENST00000551544 RPL29P47914 159 aaKnown RBP10.67□□□□□ -0.7
CACNB3-219ENST00000551544 HLA-DRB5Q30154 266 aa10.67□□□□□ -0.7
CACNB3-219ENST00000551544 FAM222BQ8WU58 562 aa10.67□□□□□ -0.7
CACNB3-219ENST00000551544 CEP250Q9BV73 2442 aa10.67□□□□□ -0.7
CACNB3-219ENST00000551544 MT-CO2P00403 227 aa10.67□□□□□ -0.7
CACNB3-219ENST00000551544 GATA4P43694 442 aa10.67□□□□□ -0.7
CACNB3-219ENST00000551544 TMEM256Q8N2U0 113 aa10.67□□□□□ -0.7
CACNB3-219ENST00000551544 ZNF439Q8NDP4 499 aa10.67□□□□□ -0.7
CACNB3-219ENST00000551544 ADTRPQ96IZ2 230 aa10.67□□□□□ -0.7
CACNB3-219ENST00000551544 SRRM4A7MD48 611 aaKnown RBP10.66□□□□□ -0.7
CACNB3-219ENST00000551544 K7EN84 100 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms