RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PLCXD3Q63HM9 321 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 LGALS9CQ6DKI2 356 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 OR52W1Q6IF63 320 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 Q6ZR54 194 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 ZNF833PQ6ZTB9 187 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 Q8IYB0 196 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 LINC01561Q8N1V8 128 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 ASCC1Q8N9N2 400 aaKnown RBP1.67□□□□□ -2.14
CPSF6-207ENST00000551516 OR10G2Q8NGC3 310 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 OR51D1Q8NGF3 324 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 OR4D5Q8NGN0 318 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 TYMSOSQ8TAI1 123 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 CASTOR1Q8WTX7 329 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 THEM6Q8WUY1 208 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 PP6455Q8WZ26 134 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 CREB3L1Q96BA8 519 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 FGGYQ96C11 551 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 NRBF2Q96F24 287 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 MYCBPQ99417 103 aaPredicted RBP1.67□□□□□ -2.14
CPSF6-207ENST00000551516 ANKRD60Q9BZ19 345 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 CENPHQ9H3R5 247 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 ISG20L2Q9H9L3 353 aaKnown RBP1.67□□□□□ -2.14
CPSF6-207ENST00000551516 ISYNA1Q9NPH2 558 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 NUDT15Q9NV35 164 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 IDI2-AS1Q9NZ38 188 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 VSIG4Q9Y279 399 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 N6AMT1Q9Y5N5 214 aa1.67□□□□□ -2.14
CPSF6-207ENST00000551516 IGLV8-61A0A075B6I0 122 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 TRAV8-7A0A075B6U6 113 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 TRAV26-1A0A087WT03 109 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 TRGV10A0A0A0MS01 117 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 TRBV6-6A0A0A6YYG2 114 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 IGHV3-35A0A0C4DH35 117 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 METTL15A6NJ78 407 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 RIIAD1A6NNX1 92 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 SERPINE3A8MV23 424 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 LOC110117498-PIK3R3F6TDL0 507 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 LINC01619G3V211 115 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 H0YJW9 148 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 SIRPB1O00241 398 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 NDUFAB1O14561 156 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 ITGB1BP1O14713 200 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 MPZL2O60487 215 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 TSC22D2O75157 780 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 WBP4O75554 376 aaKnown RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 SERF1AO75920 110 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 S1PR2O95136 353 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 FADS2O95864 444 aaKnown RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 CA1P00915 261 aaPredicted RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 GAPDHP04406 335 aaKnown RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 HSPB1P04792 205 aaKnown RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 HMGN1P05114 100 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 MRPL3P09001 348 aaKnown RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 LIMS3P0CW19 117 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 LIMS4P0CW20 117 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 ZNF3P17036 446 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 GZMHP20718 246 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 VDAC1P21796 283 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 HSD11B1P28845 292 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 BLVRBP30043 206 aaPredicted RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 IFNA8P32881 189 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 IFNGR2P38484 337 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 RPL13AP40429 203 aaKnown RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 REG1BP48304 166 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 KCNJ3P48549 501 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 RBP2P50120 134 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 HNRNPA3P51991 378 aaKnown RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 PRRX1P54821 245 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 RBM11P57052 281 aaKnown RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 ACTBP60709 375 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 DYNC1I2Q13409 638 aaKnown RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 EDDM3AQ14507 147 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 GNMTQ14749 295 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 MAPRE2Q15555 327 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 HMGN3Q15651 99 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 KISS1Q15726 138 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 PRR4Q16378 134 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 TRIM16LQ309B1 348 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 TP53I3Q53FA7 332 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 ZNF660Q6AZW8 331 aaPredicted RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 CEMP1Q6PRD7 247 aaPredicted RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 UNQ9370/PRO34162Q6UXP9 181 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 GDPD3Q7L5L3 318 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 MOB1BQ7L9L4 216 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 SLC35F2Q8IXU6 374 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 ENTHD1Q8IYW4 607 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 DEFB107AQ8IZN7 70 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 FTMTQ8N4E7 242 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 YIPF7Q8N8F6 280 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 SUMF2Q8NBJ7 301 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 CCDC54Q8NEL0 328 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 OR52L1Q8NGH7 329 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 OR2T10Q8NGZ9 312 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 OR1L1Q8NH94 360 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 NDNFQ8TB73 568 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 MRPL30Q8TCC3 161 aaKnown RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 HAVCR2Q8TDQ0 301 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 APH1BQ8WW43 257 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 CAPSLQ8WWF8 208 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 PTX4Q96A99 478 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms