RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 BORCS5Q969J3 196 aa9.55□□□□□ -0.88
PTCH1-221ENST00000550914 BSCL2Q96G97 398 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-221ENST00000550914 CNBD2Q96M20 576 aa9.55□□□□□ -0.88
PTCH1-221ENST00000550914 KLK5Q9Y337 293 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-221ENST00000550914 ETV7Q9Y603 341 aa9.55□□□□□ -0.88
PTCH1-221ENST00000550914 ANKRD65E5RJM6 399 aa9.54□□□□□ -0.88
PTCH1-221ENST00000550914 SULT1C2O00338 296 aa9.54□□□□□ -0.88
PTCH1-221ENST00000550914 NDUFA4O00483 81 aa9.54□□□□□ -0.88
PTCH1-221ENST00000550914 PMS2P11Q13670 270 aa9.54□□□□□ -0.88
PTCH1-221ENST00000550914 IZUMO2Q6UXV1 221 aa9.54□□□□□ -0.88
PTCH1-221ENST00000550914 CADM3Q8N126 398 aa9.54□□□□□ -0.88
PTCH1-221ENST00000550914 TMEM217Q8N7C4 229 aa9.54□□□□□ -0.88
PTCH1-221ENST00000550914 STPG3Q8N7X2 389 aa9.54□□□□□ -0.88
PTCH1-221ENST00000550914 GIMAP1Q8WWP7 306 aa9.54□□□□□ -0.88
PTCH1-221ENST00000550914 FCGR1BQ92637 280 aa9.54□□□□□ -0.88
PTCH1-221ENST00000550914 RNF183Q96D59 192 aa9.54□□□□□ -0.88
PTCH1-221ENST00000550914 SLC5A7Q9GZV3 580 aa9.54□□□□□ -0.88
PTCH1-221ENST00000550914 TMEM140Q9NV12 185 aa9.54□□□□□ -0.88
PTCH1-221ENST00000550914 COMMD9Q9P000 198 aa9.54□□□□□ -0.88
PTCH1-221ENST00000550914 SSR3Q9UNL2 185 aa9.54□□□□□ -0.88
PTCH1-221ENST00000550914 RRP15Q9Y3B9 282 aaKnown RBP9.54□□□□□ -0.88
PTCH1-221ENST00000550914 TRAV3A0A0B4J244 114 aa9.53□□□□□ -0.88
PTCH1-221ENST00000550914 IGHV3-35A0A0C4DH35 117 aa9.53□□□□□ -0.88
PTCH1-221ENST00000550914 K7EMT4 169 aa9.53□□□□□ -0.88
PTCH1-221ENST00000550914 SERPINE2P07093 398 aa9.53□□□□□ -0.88
PTCH1-221ENST00000550914 TRAPPC2P0DI81 140 aa9.53□□□□□ -0.88
PTCH1-221ENST00000550914 TRAPPC2BP0DI82 140 aa9.53□□□□□ -0.88
PTCH1-221ENST00000550914 CBX5P45973 191 aa9.53□□□□□ -0.88
PTCH1-221ENST00000550914 EWSR1Q01844 656 aaKnown RBP eCLIP9.53□□□□□ -0.88
PTCH1-221ENST00000550914 DEFB135Q30KP9 77 aa9.53□□□□□ -0.88
PTCH1-221ENST00000550914 ZNF773Q6PK81 442 aa9.53□□□□□ -0.88
PTCH1-221ENST00000550914 GVQW1Q8N7I0 195 aa9.53□□□□□ -0.88
PTCH1-221ENST00000550914 DMBX1Q8NFW5 382 aa9.53□□□□□ -0.88
PTCH1-221ENST00000550914 OR1L8Q8NGR8 309 aa9.53□□□□□ -0.88
PTCH1-221ENST00000550914 GALNT14Q96FL9 552 aa9.53□□□□□ -0.88
PTCH1-221ENST00000550914 RAB26Q9ULW5 256 aa9.53□□□□□ -0.88
PTCH1-221ENST00000550914 TRAV18A0A075B6X5 111 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 OR2T8A6NH00 312 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 OR4C46A6NHA9 309 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 S1PR2O95136 353 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 OR13C7P0DN81 318 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 PTHLHP12272 177 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 PSMB9P28065 219 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 SDC2P34741 201 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 ERVK-16P61578 105 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 WT1-ASQ06250 92 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 ODF3L2Q3SX64 289 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 ZNF818PQ6ZRF7 136 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 SPARTQ8N0X7 666 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 OR5AP2Q8NGF4 316 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 OR10W1Q8NGF6 305 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 OR51H1Q8NH63 302 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 SLC25A38Q96DW6 304 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 AUNIPQ9H7T9 357 aa9.52□□□□□ -0.89
PTCH1-221ENST00000550914 F11RQ9Y624 299 aaKnown RBP9.52□□□□□ -0.89
PTCH1-221ENST00000550914 TEX50A0A1B0GTY4 177 aa9.51□□□□□ -0.89
PTCH1-221ENST00000550914 MARCH11A6NNE9 402 aa9.51□□□□□ -0.89
PTCH1-221ENST00000550914 C15orf62A8K5M9 175 aa9.51□□□□□ -0.89
PTCH1-221ENST00000550914 TMEM127O75204 238 aa9.51□□□□□ -0.89
PTCH1-221ENST00000550914 FXYD4P59646 89 aa9.51□□□□□ -0.89
PTCH1-221ENST00000550914 AADACL3Q5VUY0 350 aa9.51□□□□□ -0.89
PTCH1-221ENST00000550914 SLC25A24Q6NUK1 477 aa9.51□□□□□ -0.89
PTCH1-221ENST00000550914 LSM10Q969L4 123 aaKnown RBP9.51□□□□□ -0.89
PTCH1-221ENST00000550914 C6orf62Q9GZU0 229 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-221ENST00000550914 DIABLOQ9NR28 239 aa9.51□□□□□ -0.89
PTCH1-221ENST00000550914 NDUFA4L2Q9NRX3 87 aa9.51□□□□□ -0.89
PTCH1-221ENST00000550914 C21orf62Q9NYP8 219 aa9.51□□□□□ -0.89
PTCH1-221ENST00000550914 UBQLN2Q9UHD9 624 aa9.51□□□□□ -0.89
PTCH1-221ENST00000550914 RPA2P15927 270 aa9.5□□□□□ -0.89
PTCH1-221ENST00000550914 F2RP25116 425 aa9.5□□□□□ -0.89
PTCH1-221ENST00000550914 GNRHRP30968 328 aa9.5□□□□□ -0.89
PTCH1-221ENST00000550914 CMC4P56277 68 aaPredicted RBP9.5□□□□□ -0.89
PTCH1-221ENST00000550914 HERV-K104P61576 105 aa9.5□□□□□ -0.89
PTCH1-221ENST00000550914 DHRS11Q6UWP2 260 aa9.5□□□□□ -0.89
PTCH1-221ENST00000550914 TMEM17Q86X19 198 aa9.5□□□□□ -0.89
PTCH1-221ENST00000550914 OR5H6Q8NGV6 325 aa9.5□□□□□ -0.89
PTCH1-221ENST00000550914 SCARB1Q8WTV0 552 aa9.5□□□□□ -0.89
PTCH1-221ENST00000550914 CHRDL1Q9BU40 450 aa9.5□□□□□ -0.89
PTCH1-221ENST00000550914 YTHDF1Q9BYJ9 559 aaKnown RBP9.5□□□□□ -0.89
PTCH1-221ENST00000550914 MAP6D1Q9H9H5 199 aa9.5□□□□□ -0.89
PTCH1-221ENST00000550914 HECTD4Q9Y4D8 3996 aa9.49□□□□□ -0.89
PTCH1-221ENST00000550914 F8W735 103 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-221ENST00000550914 K7EIM0 57 aa9.49□□□□□ -0.89
PTCH1-221ENST00000550914 ADMP35318 185 aa9.49□□□□□ -0.89
PTCH1-221ENST00000550914 MFAP2P55001 183 aa9.49□□□□□ -0.89
PTCH1-221ENST00000550914 LGALS9CQ6DKI2 356 aa9.49□□□□□ -0.89
PTCH1-221ENST00000550914 OR5B3Q8NH48 314 aa9.49□□□□□ -0.89
PTCH1-221ENST00000550914 GATAD1Q8WUU5 269 aa9.49□□□□□ -0.89
PTCH1-221ENST00000550914 C20orf24Q9BUV8 137 aa9.49□□□□□ -0.89
PTCH1-221ENST00000550914 FKBP11Q9NYL4 201 aa9.49□□□□□ -0.89
PTCH1-221ENST00000550914 OR51B2Q9Y5P1 312 aa9.49□□□□□ -0.89
PTCH1-221ENST00000550914 DNAH10Q8IVF4 4471 aa9.49□□□□□ -0.89
PTCH1-221ENST00000550914 PGLYRP1O75594 196 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-221ENST00000550914 SNAPC5O75971 98 aa9.48□□□□□ -0.89
PTCH1-221ENST00000550914 CTSDP07339 412 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-221ENST00000550914 CTSGP08311 255 aa9.48□□□□□ -0.89
PTCH1-221ENST00000550914 CLEC2LP0C7M8 214 aa9.48□□□□□ -0.89
PTCH1-221ENST00000550914 FCGR2BP31994 310 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-221ENST00000550914 RELQ04864 619 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-221ENST00000550914 MXD1Q05195 221 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms