RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 TEX38Q6PEX7 206 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 TMUB1Q9BVT8 246 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 NYNRINQ9P2P1 1898 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 NBASA2RRP1 2371 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 CACNA1HO95180 2353 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 MPDZO75970 2070 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 PPIAL4DF5H284 164 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 PPIHO43447 177 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 APOHP02749 345 aaPredicted RBP13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 Q5PR19 223 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 ZNF319Q9P2F9 582 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 C19orf67A6NJJ6 358 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 IL4P05112 153 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 PMS2CLQ68D20 193 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 RNASE7Q9H1E1 156 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 MEGF9Q9H1U4 602 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 JKAMPQ9P055 326 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 A0A1B0GWB2 263 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 C9JQL5 133 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 ASCL5Q7RTU5 278 aa13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 ZNF71Q9NQZ8 489 aaPredicted RBP13.36□□□□□ -0.27
RBFOX1-212ENST00000550418 SP9P0CG40 484 aa13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 MBNL2Q5VZF2 373 aaKnown RBP13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 TTC9CQ8N5M4 171 aa13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 C1RLQ9NZP8 487 aa13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 SOX21Q9Y651 276 aaPredicted RBP13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 IGKV3D-11A0A0A0MRZ8 115 aa13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 PEX7O00628 323 aa13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 CD55P08174 381 aa13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 C5orf30Q96GV9 206 aa13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 EAF1Q96JC9 268 aaPredicted RBP13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 GNB1LQ9BYB4 327 aa13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 DCAF10Q5QP82 559 aa13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 LEAP2Q969E1 77 aa13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 AKAP6Q13023 2319 aa13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 RBFOX2O43251 390 aaKnown RBP eCLIP13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 IGHV3-48P01763 117 aa13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 TSPAN7P41732 249 aa13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 OSTCQ9NRP0 149 aa13.35□□□□□ -0.27
RBFOX1-212ENST00000550418 TRAV8-6A0A0B4J262 113 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 A8MWP6 167 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 OR11H12B2RN74 326 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 TM4SF20Q53R12 229 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 TMEM256Q8N2U0 113 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 OR11H1Q8NG94 326 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 OR11H2Q8NH07 326 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 DOCK4Q8N1I0 1966 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 IGHV3-72A0A0B4J1Y9 119 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 HIGD1CA8MV81 97 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 NBEAP1P0C6P0 100 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 LYL1P12980 280 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 FOXL1Q12952 345 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 OR10J3Q5JRS4 329 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 MIR17HGQ75NE6 70 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 NEUROG1Q92886 237 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 FAM131CQ96AQ9 280 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 A0A1B0GUT8 65 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 EREGO14944 169 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 EFEMP2O95967 443 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 VWCEQ96DN2 955 aa13.34□□□□□ -0.27
RBFOX1-212ENST00000550418 TMEM78Q5T7P6 136 aa13.33□□□□□ -0.27
RBFOX1-212ENST00000550418 LINC00305Q7Z4B0 112 aa13.33□□□□□ -0.27
RBFOX1-212ENST00000550418 WDR31Q8NA23 367 aa13.33□□□□□ -0.27
RBFOX1-212ENST00000550418 OR4A5Q8NH83 315 aa13.33□□□□□ -0.27
RBFOX1-212ENST00000550418 KLF14Q8TD94 323 aaPredicted RBP13.33□□□□□ -0.27
RBFOX1-212ENST00000550418 SFTPCP11686 197 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 PNKDQ8N490 385 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 IDI2-AS1Q9NZ38 188 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 MED12Q93074 2177 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 PPIAL4EA0A075B759 164 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 C21orf140B9A014 251 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 PPIAL4FP0DN26 164 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 ITLN1Q8WWA0 313 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 RAB1CQ92928 201 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 PPIAL4AQ9Y536 164 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 ACACAQ13085 2346 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 DOCK8Q8NF50 2099 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 CCL8P80075 99 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 RPL39P5Q59GN2 51 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 UNQ5815/PRO19632Q6UWF5 114 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 FAM214BQ7L5A3 538 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 NUDT11Q96G61 164 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 C18orf15Q96N68 181 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 FNDC4Q9H6D8 234 aaPredicted RBP13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 RFNGQ9Y644 331 aa13.33□□□□□ -0.28
RBFOX1-212ENST00000550418 FCGR2BP31994 310 aaPredicted RBP13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 PSMG4Q5JS54 123 aa13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 FGF11Q92914 225 aa13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 LYZL4Q96KX0 146 aa13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 PRELID3AQ96N28 172 aa13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 REPIN1Q9BWE0 567 aaKnown RBP13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 CHRNA10Q9GZZ6 450 aa13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 RPP21Q9H633 154 aaKnown RBP13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 HILPDAQ9Y5L2 63 aa13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 PATJQ8NI35 1801 aa13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 E9PQ18 207 aa13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 TDGF1P3P51864 188 aa13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 IFI27L2Q9H2X8 130 aa13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 ANOS1P23352 680 aa13.32□□□□□ -0.28
RBFOX1-212ENST00000550418 RIPPLY3P57055 190 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms