RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 OR1N2Q8NGR9 330 aa10.41□□□□□ -0.74
NUP188-211ENST00000550219 COQ8AQ8NI60 647 aa10.41□□□□□ -0.74
NUP188-211ENST00000550219 LSM10Q969L4 123 aaKnown RBP10.41□□□□□ -0.74
NUP188-211ENST00000550219 BET1LQ9NYM9 111 aa10.41□□□□□ -0.74
NUP188-211ENST00000550219 ZNF580Q9UK33 172 aa10.41□□□□□ -0.74
NUP188-211ENST00000550219 U3KQK5 164 aa10.41□□□□□ -0.74
NUP188-211ENST00000550219 DNAH9Q9NYC9 4486 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 A0A1W2PN81 502 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 CREBL2O60519 120 aaPredicted RBP10.4□□□□□ -0.74
NUP188-211ENST00000550219 KRASP01116 189 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 FGF2P09038 288 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 OR8U8P0C7N1 319 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 SAA1P0DJI8 122 aaPredicted RBP10.4□□□□□ -0.74
NUP188-211ENST00000550219 PPIFP30405 207 aaKnown RBP10.4□□□□□ -0.74
NUP188-211ENST00000550219 G6PCP35575 357 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 CHRNA7P36544 502 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 NDPQ00604 133 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 ZNF616Q08AN1 781 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 MRGPRG-AS1Q2M3A8 158 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 VMA21Q3ZAQ7 101 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 ASPHD1Q5U4P2 390 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 TMEM268Q5VZI3 342 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 OR4A47Q6IF82 309 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 VKORC1L1Q8N0U8 176 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 C12orf45Q8N5I9 185 aaPredicted RBP10.4□□□□□ -0.74
NUP188-211ENST00000550219 ZNF491Q8N8L2 437 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 MYOZ3Q8TDC0 251 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 UBE2E2Q96LR5 201 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 PHB2Q99623 299 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 ZNF256Q9Y2P7 627 aaPredicted RBP10.4□□□□□ -0.74
NUP188-211ENST00000550219 LSM4Q9Y4Z0 139 aaKnown RBP10.4□□□□□ -0.74
NUP188-211ENST00000550219 ALG5Q9Y673 324 aa10.4□□□□□ -0.74
NUP188-211ENST00000550219 A0A0G2JRQ6 117 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 SLC25A17O43808 307 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 OR2A4O95047 310 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 ERVK-16P61578 105 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 NMSQ5H8A3 153 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 LIN54Q6MZP7 749 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 Q6ZNX1 250 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 SSX9Q7RTT3 188 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 LYZL2Q7Z4W2 148 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 FAM219AQ8IW50 185 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 SLC35G3Q8N808 338 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 OR4A5Q8NH83 315 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 VSTM2AQ8TAG5 236 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 TMEM167AQ8TBQ9 72 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 OR2A7Q96R45 310 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 FBXL15Q9H469 300 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 TMEM140Q9NV12 185 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 METTL1Q9UBP6 276 aaKnown RBP10.39□□□□□ -0.75
NUP188-211ENST00000550219 FBXO7Q9Y3I1 522 aa10.39□□□□□ -0.75
NUP188-211ENST00000550219 I3L521 148 aa10.38□□□□□ -0.75
NUP188-211ENST00000550219 UPK2O00526 184 aa10.38□□□□□ -0.75
NUP188-211ENST00000550219 SAP30O75446 220 aa10.38□□□□□ -0.75
NUP188-211ENST00000550219 KBTBD11O94819 623 aa10.38□□□□□ -0.75
NUP188-211ENST00000550219 IGLV1-40P01703 118 aa10.38□□□□□ -0.75
NUP188-211ENST00000550219 NHLRC4P0CG21 123 aaPredicted RBP10.38□□□□□ -0.75
NUP188-211ENST00000550219 HLA-GP17693 338 aa10.38□□□□□ -0.75
NUP188-211ENST00000550219 RAB9AP51151 201 aa10.38□□□□□ -0.75
NUP188-211ENST00000550219 SLURP1P55000 103 aa10.38□□□□□ -0.75
NUP188-211ENST00000550219 PRSS8Q16651 343 aa10.38□□□□□ -0.75
NUP188-211ENST00000550219 DMBX1Q8NFW5 382 aa10.38□□□□□ -0.75
NUP188-211ENST00000550219 DCUN1D4Q92564 292 aa10.38□□□□□ -0.75
NUP188-211ENST00000550219 GPR146Q96CH1 333 aa10.38□□□□□ -0.75
NUP188-211ENST00000550219 RRNAD1Q96FB5 475 aaKnown RBP10.38□□□□□ -0.75
NUP188-211ENST00000550219 CLCC1Q96S66 551 aa10.38□□□□□ -0.75
NUP188-211ENST00000550219 TPSG1Q9NRR2 321 aa10.38□□□□□ -0.75
NUP188-211ENST00000550219 TMED3Q9Y3Q3 217 aa10.38□□□□□ -0.75
NUP188-211ENST00000550219 TRAV3A0A0B4J244 114 aa10.37□□□□□ -0.75
NUP188-211ENST00000550219 FCN1O00602 326 aa10.37□□□□□ -0.75
NUP188-211ENST00000550219 OVOL1O14753 267 aa10.37□□□□□ -0.75
NUP188-211ENST00000550219 OR9G9P0C7N8 305 aa10.37□□□□□ -0.75
NUP188-211ENST00000550219 SLC25A6P12236 298 aa10.37□□□□□ -0.75
NUP188-211ENST00000550219 AKR1C2P52895 323 aa10.37□□□□□ -0.75
NUP188-211ENST00000550219 COL7A1Q02388 2944 aa10.37□□□□□ -0.75
NUP188-211ENST00000550219 KIAA0141Q14154 515 aaPredicted RBP10.37□□□□□ -0.75
NUP188-211ENST00000550219 AARDQ4LEZ3 155 aa10.37□□□□□ -0.75
NUP188-211ENST00000550219 GGNBP1Q5YKI7 109 aa10.37□□□□□ -0.75
NUP188-211ENST00000550219 Q6ZRM9 215 aa10.37□□□□□ -0.75
NUP188-211ENST00000550219 H2BFWTQ7Z2G1 175 aa10.37□□□□□ -0.75
NUP188-211ENST00000550219 PPP1R27Q86WC6 154 aa10.37□□□□□ -0.75
NUP188-211ENST00000550219 FAM103A1Q9BTL3 118 aaKnown RBP10.37□□□□□ -0.75
NUP188-211ENST00000550219 FOXA2Q9Y261 457 aaPredicted RBP10.37□□□□□ -0.75
NUP188-211ENST00000550219 IGHV4OR15-8A0A075B7B6 117 aa10.36□□□□□ -0.75
NUP188-211ENST00000550219 A0A087WW49 117 aa10.36□□□□□ -0.75
NUP188-211ENST00000550219 A0A1B0GU03 582 aa10.36□□□□□ -0.75
NUP188-211ENST00000550219 SOX15O60248 233 aa10.36□□□□□ -0.75
NUP188-211ENST00000550219 PITX3O75364 302 aa10.36□□□□□ -0.75
NUP188-211ENST00000550219 ADAP1O75689 374 aa10.36□□□□□ -0.75
NUP188-211ENST00000550219 IGHV3-11P01762 117 aa10.36□□□□□ -0.75
NUP188-211ENST00000550219 HOXB5P09067 269 aa10.36□□□□□ -0.75
NUP188-211ENST00000550219 MAS1LP35410 378 aa10.36□□□□□ -0.75
NUP188-211ENST00000550219 CX3CL1P78423 397 aa10.36□□□□□ -0.75
NUP188-211ENST00000550219 SSBP2P81877 361 aaPredicted RBP10.36□□□□□ -0.75
NUP188-211ENST00000550219 RUNX1Q01196 453 aa10.36□□□□□ -0.75
NUP188-211ENST00000550219 PJVKQ0ZLH3 352 aa10.36□□□□□ -0.75
NUP188-211ENST00000550219 IZUMO4Q1ZYL8 232 aa10.36□□□□□ -0.75
NUP188-211ENST00000550219 ZNF562Q6V9R5 426 aa10.36□□□□□ -0.75
NUP188-211ENST00000550219 MMD2Q8IY49 270 aa10.36□□□□□ -0.75
NUP188-211ENST00000550219 ZNF430Q9H8G1 570 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms