RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

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Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 F5H5K5 113 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 H0YIZ8 118 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 HLA-DQA2P01906 255 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 MAS1P04201 325 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 SAA2P0DJI9 122 aaPredicted RBP3.83□□□□□ -1.8
SCAF11-212ENST00000549162 PSMB8P28062 276 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 CMC4P56277 68 aaPredicted RBP3.83□□□□□ -1.8
SCAF11-212ENST00000549162 AKAP14Q86UN6 197 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 CMTM1Q8IZ96 169 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 OR4D10Q8NGI6 311 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 OR4A16Q8NH70 328 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 MARC2Q969Z3 335 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 KCNIP3Q9Y2W7 256 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 ARHGAP32A7KAX9 2087 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 ALMS1Q8TCU4 4167 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 HELTA6NFD8 242 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 SDCBPO00560 298 aaPredicted RBP3.83□□□□□ -1.8
SCAF11-212ENST00000549162 ATP6V1G1O75348 118 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 MOSP00540 346 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 BMI1P35226 326 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 NPBWR1P48145 328 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 PSG5Q15238 335 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 PYDC2Q56P42 97 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 ZNF506Q5JVG8 444 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 LINC00322Q6ZN03 302 aaPredicted RBP3.83□□□□□ -1.8
SCAF11-212ENST00000549162 C6orf201Q7Z4U5 140 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 C1QL4Q86Z23 238 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 OR2T10Q8NGZ9 312 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 NIPSNAP3BQ9BS92 247 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 FAAP24Q9BTP7 215 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 AMBNQ9NP70 447 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 C19orf12Q9NSK7 152 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 ZNF492Q9P255 531 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 DPM3Q9P2X0 92 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 SIGLEC9Q9Y336 463 aa3.83□□□□□ -1.8
SCAF11-212ENST00000549162 CXorf65A6NEN9 183 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 RRHO14718 337 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 EEF1E1O43324 174 aaKnown RBP3.82□□□□□ -1.8
SCAF11-212ENST00000549162 IFNA6P05013 189 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 CARD17Q5XLA6 110 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 TEX261Q6UWH6 196 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 OR1S1Q8NH92 325 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 CA5BP1Q8WTZ4 195 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 SPAG8Q99932 426 aaPredicted RBP3.82□□□□□ -1.8
SCAF11-212ENST00000549162 TMEM235A6NFC5 223 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 LINC00869P0C866 280 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 HILS1P60008 231 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 LINC00612Q8N6U2 182 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 ZFP41Q8N8Y5 198 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 OR8S1Q8NH09 359 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 ZNF502Q8TBZ5 544 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 PIGCQ92535 297 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 IFT46Q9NQC8 304 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 MOB4Q9Y3A3 225 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 B4DEV8 164 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 HSD17B6O14756 317 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 SCTP09683 121 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 COL8A2P25067 703 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 EGFEM1PQ0D2K5 195 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 CHRFAM7AQ494W8 412 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 GGNBP1Q5YKI7 109 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 LINC00469Q8N7U9 141 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 OR51L1Q8NGJ5 315 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 GPR146Q96CH1 333 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 RBMXL1Q96E39 390 aaKnown RBP3.82□□□□□ -1.8
SCAF11-212ENST00000549162 HARBI1Q96MB7 349 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 PFDN5Q99471 154 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 GINS4Q9BRT9 223 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 ZNF2Q9BSG1 426 aaPredicted RBP3.82□□□□□ -1.8
SCAF11-212ENST00000549162 ING4Q9UNL4 249 aa3.82□□□□□ -1.8
SCAF11-212ENST00000549162 A0A1W2PPK0 400 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 LINC00473A8K010 186 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 TMEM250H0YL14 139 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 LCE2BO14633 110 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 NPFFO15130 113 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 TYMSP04818 313 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 ZNF83P51522 516 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 COA6Q5JTJ3 125 aaKnown RBP3.81□□□□□ -1.8
SCAF11-212ENST00000549162 WFDC9Q8NEX5 89 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 TMEM147Q9BVK8 224 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 WDR13Q9H1Z4 485 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 C1RLQ9NZP8 487 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 COMMD3Q9UBI1 195 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 OR14J1Q9UGF5 321 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 POLR1DQ9Y2S0 133 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 BDP1A6H8Y1 2624 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 LOC100506127A0A0U1RQW1 187 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 OPN1LWP04000 364 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 RNF224P0DH78 156 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 COX6B1P14854 86 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 NPY1RP25929 384 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 RND2P52198 227 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 ZNF266Q14584 549 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 LDLRAD2Q5SZI1 272 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 S100A7AQ86SG5 101 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 STHQ8IWL8 128 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 OR5AU1Q8NGC0 362 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 CITED1Q99966 193 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 WDR61Q9GZS3 305 aaKnown RBP3.81□□□□□ -1.8
SCAF11-212ENST00000549162 GFRA4Q9GZZ7 299 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms