RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 SOSTQ9BQB4 213 aa9.62□□□□□ -0.87
PTCH1-218ENST00000548945 OVOL2Q9BRP0 275 aa9.62□□□□□ -0.87
PTCH1-218ENST00000548945 CCDC32Q9BV29 185 aa9.62□□□□□ -0.87
PTCH1-218ENST00000548945 MLXQ9UH92 298 aa9.62□□□□□ -0.87
PTCH1-218ENST00000548945 ANXA10Q9UJ72 324 aa9.62□□□□□ -0.87
PTCH1-218ENST00000548945 IGLV11-55A0A075B6I3 123 aa9.61□□□□□ -0.87
PTCH1-218ENST00000548945 A0A0A6YYH2 397 aa9.61□□□□□ -0.87
PTCH1-218ENST00000548945 ZNF320A2RRD8 509 aa9.61□□□□□ -0.87
PTCH1-218ENST00000548945 A6NJ64 397 aa9.61□□□□□ -0.87
PTCH1-218ENST00000548945 RBFOX2O43251 390 aaKnown RBP eCLIP9.61□□□□□ -0.87
PTCH1-218ENST00000548945 FGF2P09038 288 aa9.61□□□□□ -0.87
PTCH1-218ENST00000548945 C8orf88P0DMB2 117 aa9.61□□□□□ -0.87
PTCH1-218ENST00000548945 DEFA4P12838 97 aa9.61□□□□□ -0.87
PTCH1-218ENST00000548945 HLA-GP17693 338 aa9.61□□□□□ -0.87
PTCH1-218ENST00000548945 ELLP55199 621 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-218ENST00000548945 ZNF79Q15937 498 aa9.61□□□□□ -0.87
PTCH1-218ENST00000548945 C19orf35Q6ZS72 473 aa9.61□□□□□ -0.87
PTCH1-218ENST00000548945 WFDC3Q8IUB2 231 aa9.61□□□□□ -0.87
PTCH1-218ENST00000548945 GDPD1Q8N9F7 314 aa9.61□□□□□ -0.87
PTCH1-218ENST00000548945 C15orf40Q8WUR7 153 aa9.61□□□□□ -0.87
PTCH1-218ENST00000548945 SRRQ9GZT4 340 aa9.61□□□□□ -0.87
PTCH1-218ENST00000548945 BET1LQ9NYM9 111 aa9.61□□□□□ -0.87
PTCH1-218ENST00000548945 TP53TG1Q9Y2A0 90 aa9.61□□□□□ -0.87
PTCH1-218ENST00000548945 KMT2AQ03164 3969 aa9.61□□□□□ -0.87
PTCH1-218ENST00000548945 TMEM235A6NFC5 223 aa9.6□□□□□ -0.87
PTCH1-218ENST00000548945 IGHV3-23P01764 117 aa9.6□□□□□ -0.87
PTCH1-218ENST00000548945 CLEC3BP05452 202 aa9.6□□□□□ -0.87
PTCH1-218ENST00000548945 GNG2P59768 71 aa9.6□□□□□ -0.87
PTCH1-218ENST00000548945 PYDC2Q56P42 97 aa9.6□□□□□ -0.87
PTCH1-218ENST00000548945 TMEM69Q5SWH9 247 aa9.6□□□□□ -0.87
PTCH1-218ENST00000548945 ZBTB34Q8NCN2 500 aa9.6□□□□□ -0.87
PTCH1-218ENST00000548945 NUDCD2Q8WVJ2 157 aa9.6□□□□□ -0.87
PTCH1-218ENST00000548945 SRSF8Q9BRL6 282 aaKnown RBP9.6□□□□□ -0.87
PTCH1-218ENST00000548945 DIABLOQ9NR28 239 aa9.6□□□□□ -0.87
PTCH1-218ENST00000548945 TAS2R8Q9NYW2 309 aa9.6□□□□□ -0.87
PTCH1-218ENST00000548945 MRPL27Q9P0M9 148 aaKnown RBP9.6□□□□□ -0.87
PTCH1-218ENST00000548945 NUPR2A6NF83 97 aa9.59□□□□□ -0.87
PTCH1-218ENST00000548945 XRCC3O43542 346 aa9.59□□□□□ -0.87
PTCH1-218ENST00000548945 SSX5O60225 188 aa9.59□□□□□ -0.87
PTCH1-218ENST00000548945 UPK1BO75841 260 aa9.59□□□□□ -0.87
PTCH1-218ENST00000548945 SCAF4O95104 1147 aaKnown RBP9.59□□□□□ -0.87
PTCH1-218ENST00000548945 MYOD1P15172 320 aa9.59□□□□□ -0.87
PTCH1-218ENST00000548945 ATF4P18848 351 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-218ENST00000548945 OR2B8PP59922 312 aa9.59□□□□□ -0.87
PTCH1-218ENST00000548945 TNFRSF9Q07011 255 aa9.59□□□□□ -0.87
PTCH1-218ENST00000548945 TM4SF20Q53R12 229 aa9.59□□□□□ -0.87
PTCH1-218ENST00000548945 BTNL8Q6UX41 500 aa9.59□□□□□ -0.87
PTCH1-218ENST00000548945 RBPMS2Q6ZRY4 209 aaKnown RBP9.59□□□□□ -0.87
PTCH1-218ENST00000548945 Q6ZWC4 215 aa9.59□□□□□ -0.87
PTCH1-218ENST00000548945 OR1L6Q8NGR2 347 aa9.59□□□□□ -0.87
PTCH1-218ENST00000548945 ZNF502Q8TBZ5 544 aa9.59□□□□□ -0.87
PTCH1-218ENST00000548945 C5orf66Q9H5L9 145 aa9.59□□□□□ -0.87
PTCH1-218ENST00000548945 THYN1Q9P016 225 aa9.59□□□□□ -0.87
PTCH1-218ENST00000548945 UFC1Q9Y3C8 167 aa9.59□□□□□ -0.87
PTCH1-218ENST00000548945 S4R3C0 116 aa9.59□□□□□ -0.87
PTCH1-218ENST00000548945 IGLC7A0M8Q6 106 aa9.58□□□□□ -0.88
PTCH1-218ENST00000548945 MFSD2BA6NFX1 497 aa9.58□□□□□ -0.88
PTCH1-218ENST00000548945 CGB1A6NKQ9 187 aa9.58□□□□□ -0.88
PTCH1-218ENST00000548945 UBE2CO00762 179 aa9.58□□□□□ -0.88
PTCH1-218ENST00000548945 CTDSPLO15194 276 aa9.58□□□□□ -0.88
PTCH1-218ENST00000548945 BMI1P35226 326 aa9.58□□□□□ -0.88
PTCH1-218ENST00000548945 APOC4P55056 127 aa9.58□□□□□ -0.88
PTCH1-218ENST00000548945 TAS2R31P59538 309 aa9.58□□□□□ -0.88
PTCH1-218ENST00000548945 MRPS10P82664 201 aaKnown RBP9.58□□□□□ -0.88
PTCH1-218ENST00000548945 POU2AF1Q16633 256 aa9.58□□□□□ -0.88
PTCH1-218ENST00000548945 UNQ9165/PRO28630Q6UXU0 137 aa9.58□□□□□ -0.88
PTCH1-218ENST00000548945 SSX9Q7RTT3 188 aa9.58□□□□□ -0.88
PTCH1-218ENST00000548945 SLC38A6Q8IZM9 456 aa9.58□□□□□ -0.88
PTCH1-218ENST00000548945 SPAG16Q8N0X2 631 aa9.58□□□□□ -0.88
PTCH1-218ENST00000548945 OR2C3Q8N628 320 aa9.58□□□□□ -0.88
PTCH1-218ENST00000548945 SDHCQ99643 169 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-218ENST00000548945 SPAG8Q99932 426 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-218ENST00000548945 ZNF436Q9C0F3 470 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-218ENST00000548945 HRASLSQ9HDD0 168 aa9.58□□□□□ -0.88
PTCH1-218ENST00000548945 CXorf65A6NEN9 183 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 CYB5BO43169 146 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 HPRT1P00492 218 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 REG1AP05451 166 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 NQO2P16083 231 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 GPR183P32249 361 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 TAS2R20P59543 309 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 ARPC4P59998 168 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 CATR1Q13166 79 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 ZNF585BQ52M93 769 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 TRIQKQ629K1 86 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 THOC7Q6I9Y2 204 aaKnown RBP9.57□□□□□ -0.88
PTCH1-218ENST00000548945 PLET1Q6UQ28 207 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 BEST4Q8NFU0 473 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 CD300LFQ8TDQ1 290 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 VN1R17PQ8TDU5 208 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 SECTM1Q8WVN6 248 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 ABHD1Q96SE0 405 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 ATP6V0BQ99437 205 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 COMMD5Q9GZQ3 224 aa9.57□□□□□ -0.88
PTCH1-218ENST00000548945 TRAV18A0A075B6X5 111 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 KIR2DL5BA0A0G2JN68 375 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 KIR2DL5BA0A0G2JPC4 375 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 UPK2O00526 184 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 TSPAN4O14817 238 aa9.56□□□□□ -0.88
PTCH1-218ENST00000548945 SPRY2O43597 315 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms