RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 DHFR2Q86XF0 187 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 FAM19A2Q8N3H0 131 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 OR7G1Q8NGA0 311 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 OR1M1Q8NGA1 313 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 ANKRD7Q92527 254 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 SMIM19Q96E16 107 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 WDR54Q9H977 334 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 DKKL1Q9UK85 242 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 ANAPC10Q9UM13 185 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 BAIAP2Q9UQB8 552 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 POLR1DQ9Y2S0 133 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 COQ4Q9Y3A0 265 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 GMEB1Q9Y692 573 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 LHFPL6Q9Y693 200 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 BPTFQ12830 3046 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 CFAP54Q96N23 3096 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 SETXQ7Z333 2677 aaKnown RBP0.54□□□□□ -2.32
CCDC38-206ENST00000548771 WDFY4Q6ZS81 3184 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 KIF24Q5T7B8 1368 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 SMG1Q96Q15 3661 aaKnown RBP0.54□□□□□ -2.32
CCDC38-206ENST00000548771 BRWD1Q9NSI6 2320 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 GREB1Q4ZG55 1949 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 NCAPD3P42695 1498 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 RELNP78509 3460 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 DNAH14Q0VDD8 3507 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 MAPKBP1O60336 1514 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 HMGXB3Q12766 1538 aa0.54□□□□□ -2.32
CCDC38-206ENST00000548771 SCRIBQ14160 1630 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 TECTAO75443 2155 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 CDH23Q9H251 3354 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 IGHV1-69-2A0A0G2JMI3 117 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 GGT3PA6NGU5 568 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 C21orf140B9A014 251 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 SSNA1O43805 119 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 CALUO43852 315 aaPredicted RBP0.53□□□□□ -2.32
CCDC38-206ENST00000548771 REG1AP05451 166 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 METTL15P1P0C7V9 234 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 EIF2B2P49770 351 aaKnown RBP0.53□□□□□ -2.32
CCDC38-206ENST00000548771 FABP9Q0Z7S8 132 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 C1orf194Q5T5A4 169 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 CST9Q5W186 159 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.53□□□□□ -2.32
CCDC38-206ENST00000548771 C12orf29Q8N999 325 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 KCTD7Q96MP8 289 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 MRPL57Q9BQC6 102 aaKnown RBP0.53□□□□□ -2.32
CCDC38-206ENST00000548771 YIPF3Q9GZM5 350 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 OR8D2Q9GZM6 311 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 TRABDQ9H4I3 376 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 PAQR5Q9NXK6 330 aaPredicted RBP0.53□□□□□ -2.32
CCDC38-206ENST00000548771 OR5AC2Q9NZP5 309 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 RSL24D1Q9UHA3 163 aaKnown RBP0.53□□□□□ -2.32
CCDC38-206ENST00000548771 C15orf41Q9Y2V0 281 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 PXMP4Q9Y6I8 212 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 SPEGQ15772 3267 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 TONSLQ96HA7 1378 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 KIF15Q9NS87 1388 aa0.53□□□□□ -2.32
CCDC38-206ENST00000548771 MUC5BQ9HC84 5762 aaPredicted RBP0.53□□□□□ -2.32
CCDC38-206ENST00000548771 IQSEC2Q5JU85 1478 aa0.53□□□□□ -2.33
CCDC38-206ENST00000548771 HTTP42858 3142 aa0.53□□□□□ -2.33
CCDC38-206ENST00000548771 EIF4G3O43432 1585 aaKnown RBP0.53□□□□□ -2.33
CCDC38-206ENST00000548771 LRP6O75581 1613 aa0.53□□□□□ -2.33
CCDC38-206ENST00000548771 TOP2BQ02880 1626 aa0.53□□□□□ -2.33
CCDC38-206ENST00000548771 RAPGEF6Q8TEU7 1601 aa0.53□□□□□ -2.33
CCDC38-206ENST00000548771 ADCY10Q96PN6 1610 aa0.53□□□□□ -2.33
CCDC38-206ENST00000548771 MYO15AQ9UKN7 3530 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 LOC400499M0QZD8 3231 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 CELSR3Q9NYQ7 3312 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 IRGMA1A4Y4 181 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 OR4C45A6NMZ5 311 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 F5H768 121 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 GOLGA8MH3BSY2 632 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 LST1O00453 97 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 PFDN6O15212 129 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 HLA-DRAP01903 254 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 NFYAP23511 347 aaPredicted RBP0.52□□□□□ -2.33
CCDC38-206ENST00000548771 FXYD2P54710 66 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 RUNX1Q01196 453 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 ZNF345Q14585 488 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 C10orf67Q8IYJ2 551 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 Q8N402 240 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 LINC00471Q8N535 108 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 ZNF565Q8N9K5 539 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 FAM96AQ9H5X1 160 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 LRRC7Q96NW7 1537 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 LAMC3Q9Y6N6 1575 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 NHSL1Q5SYE7 1610 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 CCDC180Q9P1Z9 1646 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 RIMS1Q86UR5 1692 aaKnown RBP0.52□□□□□ -2.33
CCDC38-206ENST00000548771 HYDINQ4G0P3 5121 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 BCORL1Q5H9F3 1711 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 WDFY3Q8IZQ1 3526 aa0.52□□□□□ -2.33
CCDC38-206ENST00000548771 DNAH12Q6ZR08 3092 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 DISC1C4P0D8 188 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 NOS1APO75052 506 aaPredicted RBP0.51□□□□□ -2.33
CCDC38-206ENST00000548771 TYMSP04818 313 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 EPRSP07814 1512 aaKnown RBP0.51□□□□□ -2.33
CCDC38-206ENST00000548771 SRP19P09132 144 aaKnown RBP0.51□□□□□ -2.33
CCDC38-206ENST00000548771 KCNE1P15382 129 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 CCL1P22362 96 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 PSMB6P28072 239 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms