RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 F2RL1P55085 397 aa10.9□□□□□ -0.66
SMPDL3B-205ENST00000548116 ATP6V1FQ16864 119 aa10.9□□□□□ -0.66
SMPDL3B-205ENST00000548116 VWC2Q2TAL6 325 aa10.9□□□□□ -0.66
SMPDL3B-205ENST00000548116 LRRC75BQ2VPJ9 315 aa10.9□□□□□ -0.66
SMPDL3B-205ENST00000548116 CCDC144NLQ6NUI1 221 aa10.9□□□□□ -0.66
SMPDL3B-205ENST00000548116 LRRC75A-AS1Q8N1F1 130 aa10.9□□□□□ -0.66
SMPDL3B-205ENST00000548116 PIP4P2Q8N4L2 257 aa10.9□□□□□ -0.66
SMPDL3B-205ENST00000548116 SLC24A4Q8NFF2 622 aa10.9□□□□□ -0.66
SMPDL3B-205ENST00000548116 PINX1Q96BK5 328 aaKnown RBP10.9□□□□□ -0.66
SMPDL3B-205ENST00000548116 PARD6GQ9BYG4 376 aaPredicted RBP10.9□□□□□ -0.66
SMPDL3B-205ENST00000548116 ZNF705EA8MWA4 302 aaPredicted RBP10.9□□□□□ -0.67
SMPDL3B-205ENST00000548116 NPFFO15130 113 aa10.9□□□□□ -0.67
SMPDL3B-205ENST00000548116 MOSP00540 346 aa10.9□□□□□ -0.67
SMPDL3B-205ENST00000548116 CA2P00918 260 aa10.9□□□□□ -0.67
SMPDL3B-205ENST00000548116 OR8U8P0C7N1 319 aa10.9□□□□□ -0.67
SMPDL3B-205ENST00000548116 NPY1RP25929 384 aa10.9□□□□□ -0.67
SMPDL3B-205ENST00000548116 SAA4P35542 130 aa10.9□□□□□ -0.67
SMPDL3B-205ENST00000548116 BSXQ3C1V8 233 aa10.9□□□□□ -0.67
SMPDL3B-205ENST00000548116 ETV3LQ6ZN32 361 aa10.9□□□□□ -0.67
SMPDL3B-205ENST00000548116 MALSU1Q96EH3 234 aa10.9□□□□□ -0.67
SMPDL3B-205ENST00000548116 EAF1Q96JC9 268 aaPredicted RBP10.9□□□□□ -0.67
SMPDL3B-205ENST00000548116 TMEM147Q9BVK8 224 aa10.9□□□□□ -0.67
SMPDL3B-205ENST00000548116 WDR61Q9GZS3 305 aaKnown RBP10.9□□□□□ -0.67
SMPDL3B-205ENST00000548116 FBXL15Q9H469 300 aa10.9□□□□□ -0.67
SMPDL3B-205ENST00000548116 METTL1Q9UBP6 276 aaKnown RBP10.9□□□□□ -0.67
SMPDL3B-205ENST00000548116 UBE2L5PA0A1B0GUS4 154 aa10.89□□□□□ -0.67
SMPDL3B-205ENST00000548116 B4DSR2 109 aa10.89□□□□□ -0.67
SMPDL3B-205ENST00000548116 SNRNP70P08621 437 aaKnown RBP10.89□□□□□ -0.67
SMPDL3B-205ENST00000548116 MDKP21741 143 aaPredicted RBP10.89□□□□□ -0.67
SMPDL3B-205ENST00000548116 SSBP2P81877 361 aaPredicted RBP10.89□□□□□ -0.67
SMPDL3B-205ENST00000548116 EBI3Q14213 229 aa10.89□□□□□ -0.67
SMPDL3B-205ENST00000548116 HNF4GQ14541 408 aa10.89□□□□□ -0.67
SMPDL3B-205ENST00000548116 MMD2Q8IY49 270 aa10.89□□□□□ -0.67
SMPDL3B-205ENST00000548116 Q8N6K4 173 aa10.89□□□□□ -0.67
SMPDL3B-205ENST00000548116 NPBQ8NG41 125 aa10.89□□□□□ -0.67
SMPDL3B-205ENST00000548116 OR2G3Q8NGZ4 309 aa10.89□□□□□ -0.67
SMPDL3B-205ENST00000548116 GNPNAT1Q96EK6 184 aaPredicted RBP10.89□□□□□ -0.67
SMPDL3B-205ENST00000548116 SAT2Q96F10 170 aaPredicted RBP10.89□□□□□ -0.67
SMPDL3B-205ENST00000548116 CITED4Q96RK1 184 aa10.89□□□□□ -0.67
SMPDL3B-205ENST00000548116 RSG1Q9BU20 258 aa10.89□□□□□ -0.67
SMPDL3B-205ENST00000548116 UQCC1Q9NVA1 299 aa10.89□□□□□ -0.67
SMPDL3B-205ENST00000548116 SCAF4O95104 1147 aaKnown RBP10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 RNASE2P10153 161 aaKnown RBP10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 WT1-ASQ06250 92 aa10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 TMEM182Q6ZP80 229 aaPredicted RBP10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 PPP1R27Q86WC6 154 aa10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 MBD6Q96DN6 1003 aa10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 NAV3Q8IVL0 2385 aa10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 MFSD2BA6NFX1 497 aa10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 FCN1O00602 326 aa10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 NDUFA3O95167 84 aa10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 FHITP49789 147 aa10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 RAB11AP62491 216 aa10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 MMDQ15546 238 aa10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 C2orf83Q53S99 150 aa10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 PXDC1Q5TGL8 231 aa10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 SLC25A24Q6NUK1 477 aa10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 KRTAP1-3Q8IUG1 177 aa10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 OR2T10Q8NGZ9 312 aa10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 SCGB1C1Q8TD33 95 aa10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 TAF15Q92804 592 aaKnown RBP eCLIP10.88□□□□□ -0.67
SMPDL3B-205ENST00000548116 IGHV3OR16-10A0A075B7F0 116 aa10.87□□□□□ -0.67
SMPDL3B-205ENST00000548116 IGHV1-69DA0A0B4J2H0 117 aa10.87□□□□□ -0.67
SMPDL3B-205ENST00000548116 A0A1W2PN81 502 aa10.87□□□□□ -0.67
SMPDL3B-205ENST00000548116 NBR2O15453 112 aa10.87□□□□□ -0.67
SMPDL3B-205ENST00000548116 IGHV1-69P01742 117 aa10.87□□□□□ -0.67
SMPDL3B-205ENST00000548116 IFNA4P05014 189 aa10.87□□□□□ -0.67
SMPDL3B-205ENST00000548116 MAS1LP35410 378 aa10.87□□□□□ -0.67
SMPDL3B-205ENST00000548116 CHRNA7P36544 502 aa10.87□□□□□ -0.67
SMPDL3B-205ENST00000548116 COMPP49747 757 aaPredicted RBP10.87□□□□□ -0.67
SMPDL3B-205ENST00000548116 LOXL1Q08397 574 aaPredicted RBP10.87□□□□□ -0.67
SMPDL3B-205ENST00000548116 TNXAQ16473 311 aa10.87□□□□□ -0.67
SMPDL3B-205ENST00000548116 TUSC1Q2TAM9 212 aa10.87□□□□□ -0.67
SMPDL3B-205ENST00000548116 Q5PR19 223 aa10.87□□□□□ -0.67
SMPDL3B-205ENST00000548116 RUSC1-AS1Q66K80 236 aa10.87□□□□□ -0.67
SMPDL3B-205ENST00000548116 HIF1ANQ9NWT6 349 aa10.87□□□□□ -0.67
SMPDL3B-205ENST00000548116 PFDN2Q9UHV9 154 aa10.87□□□□□ -0.67
SMPDL3B-205ENST00000548116 IGLC7A0M8Q6 106 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 RAB5CP51148 216 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 DLK1P80370 383 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 HES1Q14469 280 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 FAM120AOSQ5T036 256 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 BTNL8Q6UX41 500 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 Q6ZRG5 221 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 CENPVQ7Z7K6 275 aaPredicted RBP10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 PSMG3Q9BT73 122 aaPredicted RBP10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 GGACTQ9BVM4 153 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 PARP11Q9NR21 331 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 FBXO7Q9Y3I1 522 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 TRAV20A0A0B4J274 112 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 TRAV40A0A0B4J280 105 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 RNF223E7ERA6 249 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 AVPP01185 164 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 RPL27AP46776 148 aaKnown RBP10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 ATP5IP56385 69 aaPredicted RBP10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 BLOC1S1P78537 153 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 ERHP84090 104 aaKnown RBP10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 AANATQ16613 207 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 LINC01356Q8N9X3 169 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms