RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 MRPL27Q9P0M9 148 aaKnown RBP1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 CD300AQ9UGN4 299 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 ZNF230Q9UIE0 474 aaPredicted RBP1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 KIF25Q9UIL4 384 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 TBC1D24Q9ULP9 559 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 SNX12Q9UMY4 172 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 USH2AO75445 5202 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 IGKV1-27A0A075B6S5 117 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 IGHV3-43A0A0B4J1X8 118 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 TRAV39A0A0B4J263 110 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 TRBV2A0A0J9YWF9 115 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 A0A0U1RQV5 110 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 FAM230AA0A1W2PPH8 454 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 FBLL1A6NHQ2 334 aaKnown RBP1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 FAM223BA6NKX1 122 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 ZNF593O00488 134 aaPredicted RBP1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 SDCBPO00560 298 aaPredicted RBP1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 SDHDO14521 159 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 DYNC1I1O14576 645 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 ARPC3O15145 178 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 CCDC22O60826 627 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 IGLV3-1P01715 115 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 CTSDP07339 412 aaPredicted RBP1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 H2BFMP0C1H6 154 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 IGHV3-43DP0DP04 118 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 ZNF44P15621 663 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 IGFBP3P17936 291 aaPredicted RBP1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 GPX2P18283 190 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 PPIBP23284 216 aaKnown RBP1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 LGALS7P47929 136 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 CAV2P51636 162 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 POLR2JP52435 117 aaKnown RBP1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 CRISP1P54107 249 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 EMP1P54849 157 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 FXYD6P3P58550 94 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 SSTP61278 116 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 RPL37AP61513 92 aaKnown RBP1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 RHOGP84095 191 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 ATP5G2Q06055 141 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 ST3GAL3Q11203 375 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 CLINT1Q14677 625 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 FXYD3Q14802 87 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 OXA1LQ15070 435 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 KRTAP6-3Q3LI67 103 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 Q3ZCU0 254 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 TMEM41BQ5BJD5 291 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 CT45A1Q5HYN5 189 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 SPIN3Q5JUX0 258 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 METTL21CQ5VZV1 264 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 TMEM42Q69YG0 159 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 LAMTOR1Q6IAA8 161 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 Q6P435 159 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 TBPL2Q6SJ96 375 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 CLEC19AQ6UXS0 136 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 UNQ9165/PRO28630Q6UXU0 137 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 Q6ZRU5 148 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 MBOAT2Q6ZWT7 520 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 SLC25A26Q70HW3 274 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 SCXQ7RTU7 201 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 TRPM8Q7Z2W7 1104 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 TMEM179BQ7Z7N9 219 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 FAM223AQ8IWN6 122 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 H1FOOQ8IZA3 346 aaPredicted RBP1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 SLC35F6Q8N357 371 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 MREGQ8N565 214 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 FAM86B1Q8N7N1 296 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 CHST4Q8NCG5 386 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 ZNF439Q8NDP4 499 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 PROKR2Q8NFJ6 384 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 OR51L1Q8NGJ5 315 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 OR51T1Q8NGJ9 327 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 OR2T4Q8NH00 348 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 CT45A3Q8NHU0 189 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 PHYHIPQ92561 330 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 GHSRQ92847 366 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 PRRC1Q96M27 445 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 ERMAPQ96PL5 475 aaPredicted RBP1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 AMELYQ99218 206 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 NIPSNAP3BQ9BS92 247 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 UPK3BQ9BT76 320 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 COMMD4Q9H0A8 199 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 HMG20AQ9NP66 347 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 TMEM14BQ9NUH8 114 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 COA4Q9NYJ1 87 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 EHFQ9NZC4 300 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 METTL1Q9UBP6 276 aaKnown RBP1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 GSTK1Q9Y2Q3 226 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 EXOSC1Q9Y3B2 195 aaKnown RBP1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 GMEB1Q9Y692 573 aa1.38□□□□□ -2.19
DEPDC4-204ENST00000547823 FCGBPQ9Y6R7 5405 aaPredicted RBP1.37□□□□□ -2.19
DEPDC4-204ENST00000547823 TRBV9A0A0B4J1U6 114 aa1.37□□□□□ -2.19
DEPDC4-204ENST00000547823 TMEM189A5PLL7 270 aa1.37□□□□□ -2.19
DEPDC4-204ENST00000547823 A6NIN4 97 aa1.37□□□□□ -2.19
DEPDC4-204ENST00000547823 EVPLLA8MZ36 301 aa1.37□□□□□ -2.19
DEPDC4-204ENST00000547823 C15orf65H3BRN8 121 aa1.37□□□□□ -2.19
DEPDC4-204ENST00000547823 COPEO14579 308 aa1.37□□□□□ -2.19
DEPDC4-204ENST00000547823 FFAR1O14842 300 aa1.37□□□□□ -2.19
DEPDC4-204ENST00000547823 DEGS1O15121 323 aa1.37□□□□□ -2.19
DEPDC4-204ENST00000547823 SLC22A1O15245 554 aa1.37□□□□□ -2.19
DEPDC4-204ENST00000547823 SULT1B1O43704 296 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms