RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 MAS1P04201 325 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 GP1BAP07359 652 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 ZNF806P0C7X5 589 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 OR8G3PP0DMU2 310 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 GABRA1P14867 456 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 ATF1P18846 271 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 CD34P28906 385 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 EVI2BP34910 448 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 NKX2-5P52952 324 aaPredicted RBP3.6□□□□□ -1.83
NPAS3-204ENST00000546849 CAV3P56539 151 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 SYNJ2BPP57105 145 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 PCBD1P61457 104 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 DCDP81605 110 aaKnown RBP3.6□□□□□ -1.83
NPAS3-204ENST00000546849 AVPI1Q5T686 147 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 NTM-AS1Q6ZSK4 140 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 DPPA2Q7Z7J5 298 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 COMMD7Q86VX2 200 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 WDFY1Q8IWB7 410 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 TMEM156Q8N614 296 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 ZNF615Q8N8J6 731 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 OR4K17Q8NGC6 315 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 OR1J4Q8NGS1 313 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 OR5H6Q8NGV6 325 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 PP6455Q8WZ26 134 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 SLC25A44Q96H78 314 aaPredicted RBP3.6□□□□□ -1.83
NPAS3-204ENST00000546849 ARL5BQ96KC2 179 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 Q96M85 177 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 GPER1Q99527 375 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 DHRS9Q9BPW9 319 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 PDCD1LG2Q9BQ51 273 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 ZNF649Q9BS31 505 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 ARL6Q9H0F7 186 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 SYT4Q9H2B2 425 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 RGCCQ9H4X1 137 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 MRPL22Q9NWU5 206 aaKnown RBP3.6□□□□□ -1.83
NPAS3-204ENST00000546849 SLC39A1Q9NY26 324 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 CLN8Q9UBY8 286 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 OPN4Q9UHM6 478 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 C14orf166Q9Y224 244 aaKnown RBP3.6□□□□□ -1.83
NPAS3-204ENST00000546849 YARS2Q9Y2Z4 477 aaKnown RBP3.6□□□□□ -1.83
NPAS3-204ENST00000546849 NOP16Q9Y3C1 178 aaKnown RBP3.6□□□□□ -1.83
NPAS3-204ENST00000546849 SPG11Q96JI7 2443 aa3.6□□□□□ -1.83
NPAS3-204ENST00000546849 ASXL3Q9C0F0 2248 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 COL12A1Q99715 3063 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 FXYD6-FXYD2A0A087WZ82 144 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 BORCS7-ASMTA0A0B4J1R7 106 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 IGHV1OR15-9A0A0B4J2B8 117 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 LOC102725191A0A1B0GVB3 256 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 TVP23AA6NH52 213 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 OR4C45A6NMZ5 311 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 OR2AT4A6NND4 320 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 PLPP3O14495 311 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 OR2A4O95047 310 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 C1QCP02747 245 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 MT-ND4P03905 459 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 IL4P05112 153 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 GYPBP06028 91 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 ZNF688P0C7X2 276 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 CD37P11049 281 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 TPT1P13693 172 aaKnown RBP3.59□□□□□ -1.83
NPAS3-204ENST00000546849 IL9P15248 144 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 PVALBP20472 110 aaPredicted RBP3.59□□□□□ -1.83
NPAS3-204ENST00000546849 PRKACBP22694 351 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 PMELP40967 661 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 RAB9AP51151 201 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 EMP2P54851 167 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 RPS23P62266 143 aaKnown RBP3.59□□□□□ -1.83
NPAS3-204ENST00000546849 LSM6P62312 80 aaKnown RBP3.59□□□□□ -1.83
NPAS3-204ENST00000546849 EBPQ15125 230 aaKnown RBP3.59□□□□□ -1.83
NPAS3-204ENST00000546849 SLC36A2Q495M3 483 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 CDNFQ49AH0 187 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 TMEM128Q5BJH2 165 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 NPSR1Q6W5P4 371 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 SLC35D2Q76EJ3 337 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 FAM122BQ7Z309 247 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 HMGN2P46Q86SG4 172 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 ZNF101Q8IZC7 436 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 C9orf62Q8N4C0 152 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 ZNF561Q8N587 486 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 EIF4E3Q8N5X7 224 aaKnown RBP3.59□□□□□ -1.83
NPAS3-204ENST00000546849 COMMD1Q8N668 190 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 RNF182Q8N6D2 247 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 OR5T3Q8NGG3 340 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 OR6K3Q8NGY3 331 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 RBPMSQ93062 196 aaKnown RBP3.59□□□□□ -1.83
NPAS3-204ENST00000546849 MRPS24Q96EL2 167 aaKnown RBP3.59□□□□□ -1.83
NPAS3-204ENST00000546849 OR2A7Q96R45 310 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 RSPO3Q9BXY4 272 aaPredicted RBP3.59□□□□□ -1.83
NPAS3-204ENST00000546849 BEX2Q9BXY8 128 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 AICDAQ9GZX7 198 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 FXYD6Q9H0Q3 95 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 AUNIPQ9H7T9 357 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 WDR54Q9H977 334 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 OR5V1Q9UGF6 321 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 OR52A1Q9UKL2 312 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 RFNGQ9Y644 331 aa3.59□□□□□ -1.83
NPAS3-204ENST00000546849 SETD2Q9BYW2 2564 aaPredicted RBP3.59□□□□□ -1.83
NPAS3-204ENST00000546849 F5P12259 2224 aa3.59□□□□□ -1.84
NPAS3-204ENST00000546849 DOPEY2Q9Y3R5 2298 aa3.59□□□□□ -1.84
NPAS3-204ENST00000546849 PCNX1Q96RV3 2341 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms