RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 LPAR6P43657 344 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 COMPP49747 757 aaPredicted RBP4.98□□□□□ -1.61
PRKDC-211ENST00000546304 PROK1P58294 105 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 GNB1P62873 340 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 RPL8P62917 257 aaKnown RBP4.98□□□□□ -1.61
PRKDC-211ENST00000546304 CX3CL1P78423 397 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 PJVKQ0ZLH3 352 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 PPP1R1AQ13522 171 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 DCTN2Q13561 401 aaKnown RBP4.98□□□□□ -1.61
PRKDC-211ENST00000546304 PRSS8Q16651 343 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 ECSCRQ19T08 205 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 SP6Q3SY56 376 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 C10orf55Q5SWW7 151 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 TMEM268Q5VZI3 342 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 LIN54Q6MZP7 749 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 NRARPQ7Z6K4 114 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 SLC25A42Q86VD7 318 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 MMD2Q8IY49 270 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 TEX45Q8NA69 505 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 OR4A5Q8NH83 315 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 RNASE11Q8TAA1 199 aaKnown RBP4.98□□□□□ -1.61
PRKDC-211ENST00000546304 LHFPL5Q8TAF8 219 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 TMEM167AQ8TBQ9 72 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 ABHD5Q8WTS1 349 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 GLYATL2Q8WU03 294 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 RBPMSQ93062 196 aaKnown RBP4.98□□□□□ -1.61
PRKDC-211ENST00000546304 SEC22AQ96IW7 307 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 NOL4LQ96MY1 436 aaPredicted RBP4.98□□□□□ -1.61
PRKDC-211ENST00000546304 OR2A7Q96R45 310 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 CLCC1Q96S66 551 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 OR51J1Q9H342 316 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 ZNF580Q9UK33 172 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 FBXO7Q9Y3I1 522 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 NUBP2Q9Y5Y2 271 aa4.98□□□□□ -1.61
PRKDC-211ENST00000546304 PKD1L1Q8TDX9 2849 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 PIGBOS1A0A0B4J2F0 54 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 C15orf61A6NNL5 157 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 FCN1O00602 326 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 ATG12O94817 140 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 CNIH1O95406 144 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 SFT2D2O95562 160 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 CDS2O95674 445 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 PTTG1O95997 202 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 IGKV1-5P01602 117 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 IGF1P05019 195 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 FGF2P09038 288 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 OR4E1P0C645 316 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 OR9G9P0C7N8 305 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 P0C879 139 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 HLA-GP17693 338 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 VDAC1P21796 283 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 CRIP2P52943 208 aaPredicted RBP4.97□□□□□ -1.61
PRKDC-211ENST00000546304 OR2B8PP59922 312 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 DHODHQ02127 395 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 DHRS2Q13268 280 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 TMEM187Q14656 261 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 FXYD3Q14802 87 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 TNXAQ16473 311 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 MRGPRG-AS1Q2M3A8 158 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 ANKRD55Q3KP44 614 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 PLET1Q6UQ28 207 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 ZNF562Q6V9R5 426 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 H2BFWTQ7Z2G1 175 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 ZNF695Q8IW36 515 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 STPG2Q8N412 459 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 SLC35G3Q8N808 338 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 CASTOR1Q8WTX7 329 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 SRSF12Q8WXF0 261 aaKnown RBP4.97□□□□□ -1.61
PRKDC-211ENST00000546304 IL22RA2Q969J5 263 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 RRNAD1Q96FB5 475 aaKnown RBP4.97□□□□□ -1.61
PRKDC-211ENST00000546304 RAX2Q96IS3 184 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 TMEM56Q96MV1 263 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 FAM103A1Q9BTL3 118 aaKnown RBP4.97□□□□□ -1.61
PRKDC-211ENST00000546304 KCNIP3Q9Y2W7 256 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 TMEM56-RWDD3S4R434 201 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 MGAM2Q2M2H8 2515 aa4.97□□□□□ -1.61
PRKDC-211ENST00000546304 TRAV3A0A0B4J244 114 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 TRAV41A0A0B4J266 112 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 A0A0B4J2A0 478 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 A0A0G2JRQ6 117 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 DUXBA0A1W2PPF3 345 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 C9orf170A2RU37 121 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 PSMB11A5LHX3 300 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 LINC01548A6NM66 108 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 G3V318 75 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 UPK2O00526 184 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 SNAPC5O75971 98 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 DUS4LO95620 317 aaKnown RBP4.96□□□□□ -1.62
PRKDC-211ENST00000546304 MAS1LP35410 378 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 RPL27AP46776 148 aaKnown RBP4.96□□□□□ -1.62
PRKDC-211ENST00000546304 RAB25P57735 213 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 SLC35B1P78383 322 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 CFHR3Q02985 330 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 NMSQ5H8A3 153 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 CT83Q5H943 113 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 C12orf54Q6X4T0 127 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 LYG2Q86SG7 212 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 FAM219AQ8IW50 185 aa4.96□□□□□ -1.62
PRKDC-211ENST00000546304 SELENOHQ8IZQ5 122 aaKnown RBP4.96□□□□□ -1.62
PRKDC-211ENST00000546304 CADM3Q8N126 398 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms