RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 TATDN3Q17R31 274 aa13.63□□□□□ -0.23
CD9-211ENST00000546073 C19orf54Q5BKX5 351 aa13.63□□□□□ -0.23
CD9-211ENST00000546073 NECAP1Q8NC96 275 aa13.63□□□□□ -0.23
CD9-211ENST00000546073 ADAD2Q8NCV1 583 aaKnown RBP13.63□□□□□ -0.23
CD9-211ENST00000546073 OR11H1Q8NG94 326 aa13.63□□□□□ -0.23
CD9-211ENST00000546073 CASTOR1Q8WTX7 329 aa13.63□□□□□ -0.23
CD9-211ENST00000546073 PLEKHA3Q9HB20 300 aa13.63□□□□□ -0.23
CD9-211ENST00000546073 RANGRFQ9HD47 186 aaPredicted RBP13.63□□□□□ -0.23
CD9-211ENST00000546073 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.63□□□□□ -0.23
CD9-211ENST00000546073 TENM1Q9UKZ4 2725 aa13.63□□□□□ -0.23
CD9-211ENST00000546073 TRAV3A0A0B4J244 114 aa13.62□□□□□ -0.23
CD9-211ENST00000546073 ADARB2-AS1A8MUL3 147 aa13.62□□□□□ -0.23
CD9-211ENST00000546073 LYRM1O43325 122 aa13.62□□□□□ -0.23
CD9-211ENST00000546073 SOX15O60248 233 aa13.62□□□□□ -0.23
CD9-211ENST00000546073 NDUFB6O95139 128 aa13.62□□□□□ -0.23
CD9-211ENST00000546073 IL6RP08887 468 aaPredicted RBP13.62□□□□□ -0.23
CD9-211ENST00000546073 LGALS1P09382 135 aaKnown RBP13.62□□□□□ -0.23
CD9-211ENST00000546073 OR13C7P0DN81 318 aa13.62□□□□□ -0.23
CD9-211ENST00000546073 SNCAP37840 140 aa13.62□□□□□ -0.23
CD9-211ENST00000546073 CCR6P51684 374 aa13.62□□□□□ -0.23
CD9-211ENST00000546073 SUB1P53999 127 aaKnown RBP eCLIP13.62□□□□□ -0.23
CD9-211ENST00000546073 DEFA1P59665 94 aa13.62□□□□□ -0.23
CD9-211ENST00000546073 DEFA3P59666 94 aa13.62□□□□□ -0.23
CD9-211ENST00000546073 HSPE1P61604 102 aaKnown RBP13.62□□□□□ -0.23
CD9-211ENST00000546073 RHOGP84095 191 aa13.62□□□□□ -0.23
CD9-211ENST00000546073 ZNF616Q08AN1 781 aa13.62□□□□□ -0.23
CD9-211ENST00000546073 MRGPRG-AS1Q2M3A8 158 aa13.62□□□□□ -0.23
CD9-211ENST00000546073 GLYATL2Q8WU03 294 aa13.62□□□□□ -0.23
CD9-211ENST00000546073 TMEM14BQ9NUH8 114 aa13.62□□□□□ -0.23
CD9-211ENST00000546073 ZMAT5Q9UDW3 170 aaKnown RBP13.62□□□□□ -0.23
CD9-211ENST00000546073 LINC01619G3V211 115 aa13.61□□□□□ -0.23
CD9-211ENST00000546073 IGHV3-11P01762 117 aa13.61□□□□□ -0.23
CD9-211ENST00000546073 HSPB1P04792 205 aaKnown RBP13.61□□□□□ -0.23
CD9-211ENST00000546073 SSBP2P81877 361 aaPredicted RBP13.61□□□□□ -0.23
CD9-211ENST00000546073 RUNX1Q01196 453 aa13.61□□□□□ -0.23
CD9-211ENST00000546073 C4orf46Q504U0 113 aa13.61□□□□□ -0.23
CD9-211ENST00000546073 COQ8AQ8NI60 647 aa13.61□□□□□ -0.23
CD9-211ENST00000546073 RCC1LQ96I51 464 aaKnown RBP13.61□□□□□ -0.23
CD9-211ENST00000546073 CXorf58Q96LI9 332 aa13.61□□□□□ -0.23
CD9-211ENST00000546073 FBXL7Q9UJT9 491 aa13.61□□□□□ -0.23
CD9-211ENST00000546073 TMEM56-RWDD3S4R434 201 aa13.61□□□□□ -0.23
CD9-211ENST00000546073 FAM240BA0A1B0GVZ2 78 aa13.6□□□□□ -0.23
CD9-211ENST00000546073 DUXBA0A1W2PPF3 345 aa13.6□□□□□ -0.23
CD9-211ENST00000546073 TEX22C9J3V5 150 aa13.6□□□□□ -0.23
CD9-211ENST00000546073 IGKV1-39P01597 117 aa13.6□□□□□ -0.23
CD9-211ENST00000546073 IGKV1D-39P04432 117 aa13.6□□□□□ -0.23
CD9-211ENST00000546073 CRYGCP07315 174 aa13.6□□□□□ -0.23
CD9-211ENST00000546073 ZP3P21754 424 aa13.6□□□□□ -0.23
CD9-211ENST00000546073 HOXA1P49639 335 aaPredicted RBP13.6□□□□□ -0.23
CD9-211ENST00000546073 ASPHD1Q5U4P2 390 aa13.6□□□□□ -0.23
CD9-211ENST00000546073 SLC25A24Q6NUK1 477 aa13.6□□□□□ -0.23
CD9-211ENST00000546073 ZNF429Q86V71 674 aa13.6□□□□□ -0.23
CD9-211ENST00000546073 SELENOHQ8IZQ5 122 aaKnown RBP13.6□□□□□ -0.23
CD9-211ENST00000546073 MYOZ3Q8TDC0 251 aa13.6□□□□□ -0.23
CD9-211ENST00000546073 EEF1AKMT3Q96AZ1 226 aa13.6□□□□□ -0.23
CD9-211ENST00000546073 SDHCQ99643 169 aaPredicted RBP13.6□□□□□ -0.23
CD9-211ENST00000546073 GNB4Q9HAV0 340 aa13.6□□□□□ -0.23
CD9-211ENST00000546073 NDUFA4L2Q9NRX3 87 aa13.6□□□□□ -0.23
CD9-211ENST00000546073 A0A0B4J2A0 478 aa13.59□□□□□ -0.23
CD9-211ENST00000546073 OR2J3O76001 311 aa13.59□□□□□ -0.23
CD9-211ENST00000546073 REG1AP05451 166 aa13.59□□□□□ -0.23
CD9-211ENST00000546073 SULT1A3P0DMM9 295 aa13.59□□□□□ -0.23
CD9-211ENST00000546073 SULT1A4P0DMN0 295 aa13.59□□□□□ -0.23
CD9-211ENST00000546073 AREGP15514 252 aa13.59□□□□□ -0.23
CD9-211ENST00000546073 CTRB1P17538 263 aa13.59□□□□□ -0.23
CD9-211ENST00000546073 TMEM187Q14656 261 aa13.59□□□□□ -0.23
CD9-211ENST00000546073 CTRB2Q6GPI1 263 aa13.59□□□□□ -0.23
CD9-211ENST00000546073 C18orf65Q6ZTR6 163 aa13.59□□□□□ -0.23
CD9-211ENST00000546073 ENKURQ8TC29 256 aa13.59□□□□□ -0.23
CD9-211ENST00000546073 RAX2Q96IS3 184 aa13.59□□□□□ -0.23
CD9-211ENST00000546073 PEF1Q9UBV8 284 aaKnown RBP13.59□□□□□ -0.23
CD9-211ENST00000546073 SHPKQ9UHJ6 478 aa13.59□□□□□ -0.23
CD9-211ENST00000546073 I3L521 148 aa13.58□□□□□ -0.24
CD9-211ENST00000546073 SFT2D2O95562 160 aa13.58□□□□□ -0.24
CD9-211ENST00000546073 IFNA21P01568 189 aa13.58□□□□□ -0.24
CD9-211ENST00000546073 IGKV1-5P01602 117 aa13.58□□□□□ -0.24
CD9-211ENST00000546073 HLA-AP01891 365 aaKnown RBP13.58□□□□□ -0.24
CD9-211ENST00000546073 MYOD1P15172 320 aa13.58□□□□□ -0.24
CD9-211ENST00000546073 PRCDQ00LT1 54 aa13.58□□□□□ -0.24
CD9-211ENST00000546073 DEFB136Q30KP8 78 aa13.58□□□□□ -0.24
CD9-211ENST00000546073 C15orf32Q32M92 178 aa13.58□□□□□ -0.24
CD9-211ENST00000546073 DUX3Q96PT4 197 aa13.58□□□□□ -0.24
CD9-211ENST00000546073 HIPK2Q9H2X6 1198 aa13.58□□□□□ -0.24
CD9-211ENST00000546073 ANKRD34BA5PLL1 514 aa13.57□□□□□ -0.24
CD9-211ENST00000546073 CEBPZOSA8MTT3 80 aa13.57□□□□□ -0.24
CD9-211ENST00000546073 UPK1BO75841 260 aa13.57□□□□□ -0.24
CD9-211ENST00000546073 PRH1P02810 166 aa13.57□□□□□ -0.24
CD9-211ENST00000546073 SPCS3P61009 180 aa13.57□□□□□ -0.24
CD9-211ENST00000546073 EXOSC2Q13868 293 aaKnown RBP13.57□□□□□ -0.24
CD9-211ENST00000546073 NOXA1Q86UR1 476 aa13.57□□□□□ -0.24
CD9-211ENST00000546073 WFDC9Q8NEX5 89 aa13.57□□□□□ -0.24
CD9-211ENST00000546073 OR10W1Q8NGF6 305 aa13.57□□□□□ -0.24
CD9-211ENST00000546073 OR1S1Q8NH92 325 aa13.57□□□□□ -0.24
CD9-211ENST00000546073 TMEM230Q96A57 120 aa13.57□□□□□ -0.24
CD9-211ENST00000546073 P2RX4Q99571 388 aa13.57□□□□□ -0.24
CD9-211ENST00000546073 ELOVL1Q9BW60 279 aa13.57□□□□□ -0.24
CD9-211ENST00000546073 CACNG5Q9UF02 275 aa13.57□□□□□ -0.24
CD9-211ENST00000546073 TMED3Q9Y3Q3 217 aa13.57□□□□□ -0.24
CD9-211ENST00000546073 TRBV7-1A0A0A6YYK4 115 aa13.56□□□□□ -0.24
CD9-211ENST00000546073 TRBV9A0A0B4J1U6 114 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms