RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 PTBP1P26599 531 aaKnown RBP eCLIP17.12■□□□□ 0.33
CHD4-214ENST00000545942 HLA-DMAP28067 261 aa17.12■□□□□ 0.33
CHD4-214ENST00000545942 GPR183P32249 361 aa17.12■□□□□ 0.33
CHD4-214ENST00000545942 LPAR6P43657 344 aa17.12■□□□□ 0.33
CHD4-214ENST00000545942 NCS1P62166 190 aa17.12■□□□□ 0.33
CHD4-214ENST00000545942 DEFB125Q8N687 156 aa17.12■□□□□ 0.33
CHD4-214ENST00000545942 GDPD1Q8N9F7 314 aa17.12■□□□□ 0.33
CHD4-214ENST00000545942 OR1L8Q8NGR8 309 aa17.12■□□□□ 0.33
CHD4-214ENST00000545942 GPX8Q8TED1 209 aa17.12■□□□□ 0.33
CHD4-214ENST00000545942 FCAMRQ8WWV6 532 aa17.12■□□□□ 0.33
CHD4-214ENST00000545942 CMTM3Q96MX0 182 aa17.12■□□□□ 0.33
CHD4-214ENST00000545942 FUNDC2Q9BWH2 189 aa17.12■□□□□ 0.33
CHD4-214ENST00000545942 TEX50A0A1B0GTY4 177 aa17.11■□□□□ 0.33
CHD4-214ENST00000545942 SMIM31A0A1B0GVY4 71 aa17.11■□□□□ 0.33
CHD4-214ENST00000545942 OR11H12B2RN74 326 aa17.11■□□□□ 0.33
CHD4-214ENST00000545942 KRASP01116 189 aa17.11■□□□□ 0.33
CHD4-214ENST00000545942 APOA1P02647 267 aa17.11■□□□□ 0.33
CHD4-214ENST00000545942 SERPINE2P07093 398 aa17.11■□□□□ 0.33
CHD4-214ENST00000545942 OR13C7P0DN81 318 aa17.11■□□□□ 0.33
CHD4-214ENST00000545942 ZNF57Q68EA5 555 aaPredicted RBP17.11■□□□□ 0.33
CHD4-214ENST00000545942 SLC16A13Q7RTY0 426 aa17.11■□□□□ 0.33
CHD4-214ENST00000545942 CADM3Q8N126 398 aa17.11■□□□□ 0.33
CHD4-214ENST00000545942 UXS1Q8NBZ7 420 aa17.11■□□□□ 0.33
CHD4-214ENST00000545942 TSPAN5P62079 268 aa17.1■□□□□ 0.33
CHD4-214ENST00000545942 WT1-ASQ06250 92 aa17.1■□□□□ 0.33
CHD4-214ENST00000545942 ZNF585BQ52M93 769 aa17.1■□□□□ 0.33
CHD4-214ENST00000545942 PLET1Q6UQ28 207 aa17.1■□□□□ 0.33
CHD4-214ENST00000545942 TMEM61Q8N0U2 210 aa17.1■□□□□ 0.33
CHD4-214ENST00000545942 VN1R17PQ8TDU5 208 aa17.1■□□□□ 0.33
CHD4-214ENST00000545942 SCPEP1Q9HB40 452 aa17.1■□□□□ 0.33
CHD4-214ENST00000545942 NDUFA4L2Q9NRX3 87 aa17.1■□□□□ 0.33
CHD4-214ENST00000545942 MLXQ9UH92 298 aa17.1■□□□□ 0.33
CHD4-214ENST00000545942 SNAPC5O75971 98 aa17.09■□□□□ 0.33
CHD4-214ENST00000545942 G6PCP35575 357 aa17.09■□□□□ 0.33
CHD4-214ENST00000545942 VBP1P61758 197 aa17.09■□□□□ 0.33
CHD4-214ENST00000545942 TM4SF20Q53R12 229 aa17.09■□□□□ 0.33
CHD4-214ENST00000545942 ZFAND6Q6FIF0 208 aa17.09■□□□□ 0.33
CHD4-214ENST00000545942 LPCAT3Q6P1A2 487 aa17.09■□□□□ 0.33
CHD4-214ENST00000545942 UNQ9165/PRO28630Q6UXU0 137 aa17.09■□□□□ 0.33
CHD4-214ENST00000545942 LSM10Q969L4 123 aaKnown RBP17.09■□□□□ 0.33
CHD4-214ENST00000545942 MARC2Q969Z3 335 aa17.09■□□□□ 0.33
CHD4-214ENST00000545942 WFDC10AQ9H1F0 79 aa17.09■□□□□ 0.33
CHD4-214ENST00000545942 HIPK2Q9H2X6 1198 aa17.09■□□□□ 0.33
CHD4-214ENST00000545942 SRD5A3Q9H8P0 318 aa17.09■□□□□ 0.33
CHD4-214ENST00000545942 OR51B2Q9Y5P1 312 aa17.09■□□□□ 0.33
CHD4-214ENST00000545942 SELENOKQ9Y6D0 94 aa17.09■□□□□ 0.33
CHD4-214ENST00000545942 S100GP29377 79 aa17.08■□□□□ 0.32
CHD4-214ENST00000545942 SLC25A24Q6NUK1 477 aa17.08■□□□□ 0.32
CHD4-214ENST00000545942 SNX29P2Q8IUI4 249 aa17.08■□□□□ 0.32
CHD4-214ENST00000545942 HINT2Q9BX68 163 aa17.08■□□□□ 0.32
CHD4-214ENST00000545942 PRNDQ9UKY0 176 aa17.08■□□□□ 0.32
CHD4-214ENST00000545942 NSG2Q9Y328 171 aa17.08■□□□□ 0.32
CHD4-214ENST00000545942 UFC1Q9Y3C8 167 aa17.08■□□□□ 0.32
CHD4-214ENST00000545942 IGHV3-35A0A0C4DH35 117 aa17.07■□□□□ 0.32
CHD4-214ENST00000545942 RBMY1BA6NDE4 496 aaKnown RBP17.07■□□□□ 0.32
CHD4-214ENST00000545942 RBMY1EA6NEQ0 496 aaKnown RBP17.07■□□□□ 0.32
CHD4-214ENST00000545942 TGOLN2O43493 480 aa17.07■□□□□ 0.32
CHD4-214ENST00000545942 RBMY1DP0C7P1 496 aaKnown RBP17.07■□□□□ 0.32
CHD4-214ENST00000545942 C8orf88P0DMB2 117 aa17.07■□□□□ 0.32
CHD4-214ENST00000545942 RCVRNP35243 200 aa17.07■□□□□ 0.32
CHD4-214ENST00000545942 ELLP55199 621 aaPredicted RBP17.07■□□□□ 0.32
CHD4-214ENST00000545942 PHLDA2Q53GA4 152 aa17.07■□□□□ 0.32
CHD4-214ENST00000545942 BTNL8Q6UX41 500 aa17.07■□□□□ 0.32
CHD4-214ENST00000545942 TSC22D3Q99576 134 aa17.07■□□□□ 0.32
CHD4-214ENST00000545942 RETNQ9HD89 108 aa17.07■□□□□ 0.32
CHD4-214ENST00000545942 FAM212BQ9NTI7 297 aaPredicted RBP17.07■□□□□ 0.32
CHD4-214ENST00000545942 F11RQ9Y624 299 aaKnown RBP17.07■□□□□ 0.32
CHD4-214ENST00000545942 ELK1P19419 428 aa17.06■□□□□ 0.32
CHD4-214ENST00000545942 OR52B4Q8NGK2 314 aa17.06■□□□□ 0.32
CHD4-214ENST00000545942 OR5B3Q8NH48 314 aa17.06■□□□□ 0.32
CHD4-214ENST00000545942 ZNF436Q9C0F3 470 aaPredicted RBP17.06■□□□□ 0.32
CHD4-214ENST00000545942 FKBP11Q9NYL4 201 aa17.06■□□□□ 0.32
CHD4-214ENST00000545942 MRPL27Q9P0M9 148 aaKnown RBP17.06■□□□□ 0.32
CHD4-214ENST00000545942 OR2T8A6NH00 312 aa17.05■□□□□ 0.32
CHD4-214ENST00000545942 HPGDSO60760 199 aa17.05■□□□□ 0.32
CHD4-214ENST00000545942 SCAF4O95104 1147 aaKnown RBP17.05■□□□□ 0.32
CHD4-214ENST00000545942 RORCP51449 518 aa17.05■□□□□ 0.32
CHD4-214ENST00000545942 ANKRD55Q3KP44 614 aa17.05■□□□□ 0.32
CHD4-214ENST00000545942 BSCL2Q96G97 398 aaPredicted RBP17.05■□□□□ 0.32
CHD4-214ENST00000545942 TMEM56Q96MV1 263 aa17.05■□□□□ 0.32
CHD4-214ENST00000545942 TRAV25A0A0B4J276 109 aa17.04■□□□□ 0.32
CHD4-214ENST00000545942 MFAP2P55001 183 aa17.04■□□□□ 0.32
CHD4-214ENST00000545942 SPSB3Q6PJ21 355 aa17.04■□□□□ 0.32
CHD4-214ENST00000545942 RBPMS2Q6ZRY4 209 aaKnown RBP17.04■□□□□ 0.32
CHD4-214ENST00000545942 TBC1D26Q86UD7 250 aa17.04■□□□□ 0.32
CHD4-214ENST00000545942 SLC38A6Q8IZM9 456 aa17.04■□□□□ 0.32
CHD4-214ENST00000545942 OR1L6Q8NGR2 347 aa17.04■□□□□ 0.32
CHD4-214ENST00000545942 TMEM190Q8WZ59 177 aa17.04■□□□□ 0.32
CHD4-214ENST00000545942 ATP6V0BQ99437 205 aa17.04■□□□□ 0.32
CHD4-214ENST00000545942 TMEM14BQ9NUH8 114 aa17.04■□□□□ 0.32
CHD4-214ENST00000545942 C15orf61A6NNL5 157 aa17.03■□□□□ 0.32
CHD4-214ENST00000545942 UCP3P55916 312 aa17.03■□□□□ 0.32
CHD4-214ENST00000545942 FAM110AQ9BQ89 295 aa17.03■□□□□ 0.32
CHD4-214ENST00000545942 C21orf62Q9NYP8 219 aa17.03■□□□□ 0.32
CHD4-214ENST00000545942 DBX1A6NMT0 343 aa17.02■□□□□ 0.32
CHD4-214ENST00000545942 MZT2AQ6P582 158 aa17.02■□□□□ 0.32
CHD4-214ENST00000545942 SCARB1Q8WTV0 552 aa17.02■□□□□ 0.32
CHD4-214ENST00000545942 DAZ1Q9NQZ3 744 aaKnown RBP17.02■□□□□ 0.32
CHD4-214ENST00000545942 IGHV3-21A0A0B4J1V1 117 aa17.01■□□□□ 0.31
CHD4-214ENST00000545942 LCE6AA0A183 80 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms