RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 TRAV39A0A0B4J263 110 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 TRAV38-1A0A0B4J264 116 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 HELTA6NFD8 242 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 ZNF705FA8MVS1 300 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-225ENST00000545920 M0R1X1 148 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 FCN1O00602 326 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 AMY1AP04745 511 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 C1QTNF9P0C862 333 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 ZNF705DP0CH99 300 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-225ENST00000545920 ZNF705BP0CI00 300 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-225ENST00000545920 RNF224P0DH78 156 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 CGB3P0DN86 165 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 CGB7P0DN87 165 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 SELLP14151 372 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 MPV17P39210 176 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 RPL31P62899 125 aaKnown RBP5.32□□□□□ -1.56
SNHG1-225ENST00000545920 ZXDAP98168 799 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 PRCDQ00LT1 54 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 CD69Q07108 199 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 PMCHL1Q16048 86 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 HLA-DRB5Q30154 266 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 COL5A1-AS1Q5SY13 56 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 TPTE2P1Q5T6R2 138 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 FAM71F2Q6NXP2 309 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 ATP5L2Q7Z4Y8 100 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 BAGE3Q86Y29 109 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 BAGE2Q86Y30 109 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 C1orf210Q8IVY1 113 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 MMD2Q8IY49 270 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 STPG3Q8N7X2 389 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 STXBP6Q8NFX7 210 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 OR1L8Q8NGR8 309 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 OR4A5Q8NH83 315 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 MAFAQ8NHW3 353 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-225ENST00000545920 FAM222BQ8WU58 562 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 GATAD1Q8WUU5 269 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 SARAFQ96BY9 339 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 TBX15Q96SF7 602 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 IFI27L2Q9H2X8 130 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 PRO3102Q9H379 93 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 PLSCR4Q9NRQ2 329 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 V9GYV3 84 aa5.32□□□□□ -1.56
SNHG1-225ENST00000545920 TRBV20OR9-2A0A075B6H5 130 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 A0A1W2PN81 502 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 SMIM27A0A1W2PRY6 76 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 AHRRA9YTQ3 701 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 ZNF253O75346 499 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 IGHV3-13P01766 116 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 CRYAAP02489 173 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 OR4A8P0C604 315 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 FTH1P19P0C7X4 201 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 PPOXP50336 477 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 LOXL3P58215 753 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 UBE2G2P60604 165 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 RELQ04864 619 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-225ENST00000545920 MIC13Q5XKP0 118 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 LINC00696Q6ZRV3 163 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 OR1L6Q8NGR2 347 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 OR1L4Q8NGR5 311 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 OSR1Q8TAX0 266 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-225ENST00000545920 LRRC29Q8WV35 223 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 KCNS1Q96KK3 526 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 ZNF714Q96N38 554 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 OR2V2Q96R30 315 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 CDX2Q99626 313 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-225ENST00000545920 SAMD10Q9BYL1 202 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 PLEKHA3Q9HB20 300 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 PATZ1Q9HBE1 687 aaKnown RBP5.31□□□□□ -1.56
SNHG1-225ENST00000545920 PARD6AQ9NPB6 346 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 FSCN3Q9NQT6 498 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 BET1LQ9NYM9 111 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 CALYQ9NYX4 217 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 SPRR3Q9UBC9 169 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 DKK4Q9UBT3 224 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 UQCR10Q9UDW1 63 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 CDC42EP3Q9UKI2 254 aa5.31□□□□□ -1.56
SNHG1-225ENST00000545920 TBL2Q9Y4P3 447 aaKnown RBP5.31□□□□□ -1.56
SNHG1-225ENST00000545920 RTTNQ86VV8 2226 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 TRAV17A0A0B4J275 112 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 IGHV2OR16-5A0A0B4J2B6 119 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 A0A0G2JNJ9 132 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 KBTBD11-OT1A0A1B0GTJ5 212 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 IZUMO1RA6ND01 250 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 SNURFLB1AK76 121 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 UPK2O00526 184 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 RRHO14718 337 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 DLEU1O43261 78 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 SERF1AO75920 110 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 LHBP01229 141 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 GPX1P07203 203 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 LINC00869P0C866 280 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 C8orf88P0DMB2 117 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 MALP21145 153 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 SSTR5P35346 364 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 SUB1P53999 127 aaKnown RBP eCLIP5.3□□□□□ -1.56
SNHG1-225ENST00000545920 SELENOVP59797 346 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 BPIFB3P59826 476 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 KLF5Q13887 457 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-225ENST00000545920 FBLN7Q53RD9 439 aa5.3□□□□□ -1.56
SNHG1-225ENST00000545920 IGFL2Q6UWQ7 119 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms