RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 VSIG8P0DPA2 414 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 CAMPP49913 170 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 FAM201AQ5SY85 155 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 LINC00114Q6XXX2 140 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 DTX1Q86Y01 620 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 SLC24A4Q8NFF2 622 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 MRPL24Q96A35 216 aaKnown RBP7.28□□□□□ -1.24
CLIP1-218ENST00000545889 TRAV40A0A0B4J280 105 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 LYNX1G3V0Z9 82 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 CXCL1P09341 107 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 LYNX1P0DP58 116 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 GLIPR1P48060 266 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 EMP1P54849 157 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 TMEM30BQ3MIR4 351 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 DMKNQ6E0U4 476 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-218ENST00000545889 ZCCHC24Q8N2G6 241 aaKnown RBP7.28□□□□□ -1.24
CLIP1-218ENST00000545889 RARRES2Q99969 163 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 MSGN1A6NI15 193 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 RPL7P18124 248 aaKnown RBP7.28□□□□□ -1.24
CLIP1-218ENST00000545889 WNT5AP41221 380 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 SELENOTP62341 195 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 RANP62826 216 aaKnown RBP7.28□□□□□ -1.24
CLIP1-218ENST00000545889 WDR25Q64LD2 544 aaPredicted RBP7.28□□□□□ -1.24
CLIP1-218ENST00000545889 ZIC4Q8N9L1 334 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 OR5AC2Q9NZP5 309 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 HEATR1Q9H583 2144 aaKnown RBP7.28□□□□□ -1.24
CLIP1-218ENST00000545889 PRRC2CQ9Y520 2896 aaKnown RBP7.28□□□□□ -1.24
CLIP1-218ENST00000545889 TRAV30A0A087WSZ9 112 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 IGKV1D-43A0A0B4J1Z2 117 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 RND2P52198 227 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 IL24Q13007 206 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 BPIFA4PQ86YQ2 179 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 FAM216BQ8N7L0 139 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 SYT8Q8NBV8 401 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 TMEM116Q8NCL8 245 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 MIEN1Q9BRT3 115 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 PEMTQ9UBM1 199 aa7.28□□□□□ -1.24
CLIP1-218ENST00000545889 HELTA6NFD8 242 aa7.27□□□□□ -1.25
CLIP1-218ENST00000545889 FGF16O43320 207 aa7.27□□□□□ -1.25
CLIP1-218ENST00000545889 IGHV3-11P01762 117 aa7.27□□□□□ -1.25
CLIP1-218ENST00000545889 FCGR2BP31994 310 aaPredicted RBP7.27□□□□□ -1.25
CLIP1-218ENST00000545889 TMEM183AQ8IXX5 376 aa7.27□□□□□ -1.25
CLIP1-218ENST00000545889 ZNF586Q9NXT0 402 aa7.27□□□□□ -1.25
CLIP1-218ENST00000545889 ZNF107Q9UII5 783 aaPredicted RBP7.27□□□□□ -1.25
CLIP1-218ENST00000545889 PSG2P11465 335 aa7.27□□□□□ -1.25
CLIP1-218ENST00000545889 AREGP15514 252 aa7.27□□□□□ -1.25
CLIP1-218ENST00000545889 IGHV1-2P23083 117 aa7.27□□□□□ -1.25
CLIP1-218ENST00000545889 LY6G6FQ5SQ64 297 aa7.27□□□□□ -1.25
CLIP1-218ENST00000545889 COLCA1Q6ZS62 124 aa7.27□□□□□ -1.25
CLIP1-218ENST00000545889 TMEM45BQ96B21 275 aa7.27□□□□□ -1.25
CLIP1-218ENST00000545889 GPX7Q96SL4 187 aaPredicted RBP7.27□□□□□ -1.25
CLIP1-218ENST00000545889 BET1LQ9NYM9 111 aa7.27□□□□□ -1.25
CLIP1-218ENST00000545889 ST6GALNAC2Q9UJ37 374 aa7.27□□□□□ -1.25
CLIP1-218ENST00000545889 KIAA1324LA8MWY0 1029 aaPredicted RBP7.27□□□□□ -1.25
CLIP1-218ENST00000545889 OGG1O15527 345 aa7.27□□□□□ -1.25
CLIP1-218ENST00000545889 AMBPP02760 352 aa7.27□□□□□ -1.25
CLIP1-218ENST00000545889 ZNF837Q96EG3 531 aaPredicted RBP7.27□□□□□ -1.25
CLIP1-218ENST00000545889 DPH3P1Q9H4G8 78 aa7.27□□□□□ -1.25
CLIP1-218ENST00000545889 HIVEP3Q5T1R4 2406 aa7.27□□□□□ -1.25
CLIP1-218ENST00000545889 A0A0G2JK05 382 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 IGSF23A1L1A6 192 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 TMEM262E9PQX1 116 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 P01737 135 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 SULT1A2P50226 295 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 RELBQ01201 579 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 SIGLECL1Q8N7X8 197 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 RCC1LQ96I51 464 aaKnown RBP7.26□□□□□ -1.25
CLIP1-218ENST00000545889 HDHD3Q9BSH5 251 aaPredicted RBP7.26□□□□□ -1.25
CLIP1-218ENST00000545889 QTRT1Q9BXR0 403 aaKnown RBP7.26□□□□□ -1.25
CLIP1-218ENST00000545889 SRD5A3Q9H8P0 318 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 ARL2-SNX15V9GYD0 113 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 JMJD1CQ15652 2540 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 RBFOX3A6NFN3 312 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 TMEM238C9JI98 176 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 NPIPB7O75200 414 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 IL18BPO95998 194 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 IGKV1D-33P01593 117 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 IGKV1-33P01594 117 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 PRSS1P07477 247 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 FAM157CP0CG43 387 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 CCKARP32238 428 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 TIMP3P35625 211 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 GAS1P54826 345 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 OR4A47Q6IF82 309 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 PRSS54Q6PEW0 395 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 Q71RC1 249 aaPredicted RBP7.26□□□□□ -1.25
CLIP1-218ENST00000545889 UBE2DNLQ8IWF7 75 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 NAT8BQ9UHF3 227 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 JPT1Q9UK76 154 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 ZFYVE26Q68DK2 2539 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 IGHV3-49A0A0A0MS15 119 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 IGLV1-36A0A0B4J1U3 117 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 MELTFP08582 738 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 EFNB2P52799 333 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 FDX2Q6P4F2 183 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 GTSCR1Q86UQ5 136 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 CYB561D1Q8N8Q1 229 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 ZFP30Q9Y2G7 519 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 EML5Q05BV3 1969 aa7.26□□□□□ -1.25
CLIP1-218ENST00000545889 TRAV8-7A0A075B6U6 113 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms