RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 TRAV3A0A0B4J244 114 aa7.21□□□□□ -1.26
TDP1-204ENST00000545686 HELTA6NFD8 242 aa7.21□□□□□ -1.26
TDP1-204ENST00000545686 ISLRO14498 428 aa7.21□□□□□ -1.26
TDP1-204ENST00000545686 TFF1P04155 84 aa7.21□□□□□ -1.26
TDP1-204ENST00000545686 CFHR2P36980 270 aa7.21□□□□□ -1.26
TDP1-204ENST00000545686 RPL39P5Q59GN2 51 aa7.21□□□□□ -1.26
TDP1-204ENST00000545686 PQLC2Q6ZP29 291 aa7.21□□□□□ -1.26
TDP1-204ENST00000545686 VKORC1L1Q8N0U8 176 aa7.21□□□□□ -1.26
TDP1-204ENST00000545686 OR8I2Q8N0Y5 310 aa7.21□□□□□ -1.26
TDP1-204ENST00000545686 OR4P4Q8NGL7 312 aa7.21□□□□□ -1.26
TDP1-204ENST00000545686 ADTRPQ96IZ2 230 aa7.21□□□□□ -1.26
TDP1-204ENST00000545686 GNB4Q9HAV0 340 aa7.21□□□□□ -1.26
TDP1-204ENST00000545686 PAM16Q9Y3D7 125 aa7.21□□□□□ -1.26
TDP1-204ENST00000545686 IGKV1D-17A0A075B6S4 117 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 CGAP01215 116 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 IGLV1-44P01699 117 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 HLA-DQA1P01909 254 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 LINC00869P0C866 280 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 ARG2P78540 354 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 LTC4SQ16873 150 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 TIGITQ495A1 244 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 RNFT1Q5M7Z0 435 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 OR4A47Q6IF82 309 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 TMEM136Q6ZRR5 245 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 GCSAMQ8N6F7 178 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 LPAR2Q9HBW0 351 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 TECRQ9NZ01 308 aaKnown RBP7.2□□□□□ -1.26
TDP1-204ENST00000545686 FBXL7Q9UJT9 491 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 CA2P00918 260 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 AMY1AP04745 511 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 CECR9P0C854 216 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 CTRLP40313 264 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 TAS2R45P59539 299 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 HOXA4Q00056 320 aaPredicted RBP7.2□□□□□ -1.26
TDP1-204ENST00000545686 RELQ04864 619 aaPredicted RBP7.2□□□□□ -1.26
TDP1-204ENST00000545686 TDRG1Q3Y452 100 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 COL5A1-AS1Q5SY13 56 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 MIR17HGQ75NE6 70 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 TMPRSS7Q7RTY8 843 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 Q8N976 141 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 ST6GALNAC3Q8NDV1 305 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 FAM234AQ9H0X4 552 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 NAT8BQ9UHF3 227 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 IL17BQ9UHF5 180 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 DUSP13Q9UII6 198 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 ZNF257Q9Y2Q1 563 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 VPS13AQ96RL7 3174 aa7.2□□□□□ -1.26
TDP1-204ENST00000545686 DSCAMO60469 2012 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 A0A1W2PNU3 283 aaPredicted RBP7.19□□□□□ -1.26
TDP1-204ENST00000545686 SMIM27A0A1W2PRY6 76 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 DIRC3C9JPN6 131 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 F2Z2F3 143 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 ZNF253O75346 499 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 FOXH1O75593 365 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 IGHG3P01860 377 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 IGFBP2P18065 325 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 CD33P20138 364 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 ZNF134P52741 427 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 PSG5Q15238 335 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 RASL11AQ6T310 242 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 NABP2Q9BQ15 211 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 COMMD5Q9GZQ3 224 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 MSL2Q9HCI7 577 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 CALYQ9NYX4 217 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 IDI2-AS1Q9NZ38 188 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 PRNDQ9UKY0 176 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 TBL2Q9Y4P3 447 aaKnown RBP7.19□□□□□ -1.26
TDP1-204ENST00000545686 RAI1Q7Z5J4 1906 aaPredicted RBP7.19□□□□□ -1.26
TDP1-204ENST00000545686 A0A1W2PRE2 83 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 CGB3P0DN86 165 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 CGB7P0DN87 165 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 OR5I1Q13606 314 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 TMEM30BQ3MIR4 351 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 C19orf35Q6ZS72 473 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 NRN1Q9NPD7 142 aa7.19□□□□□ -1.26
TDP1-204ENST00000545686 IGHV2OR16-5A0A0B4J2B6 119 aa7.18□□□□□ -1.26
TDP1-204ENST00000545686 ZNF324O75467 553 aaPredicted RBP7.18□□□□□ -1.26
TDP1-204ENST00000545686 AGFG2O95081 481 aa7.18□□□□□ -1.26
TDP1-204ENST00000545686 CRYBB3P26998 211 aa7.18□□□□□ -1.26
TDP1-204ENST00000545686 AMTP48728 403 aa7.18□□□□□ -1.26
TDP1-204ENST00000545686 PPOXP50336 477 aa7.18□□□□□ -1.26
TDP1-204ENST00000545686 FABP6P51161 128 aa7.18□□□□□ -1.26
TDP1-204ENST00000545686 KRTDAPP60985 99 aa7.18□□□□□ -1.26
TDP1-204ENST00000545686 SUMO1P63165 101 aaKnown RBP7.18□□□□□ -1.26
TDP1-204ENST00000545686 PRCDQ00LT1 54 aa7.18□□□□□ -1.26
TDP1-204ENST00000545686 FAM169BQ8N8A8 192 aa7.18□□□□□ -1.26
TDP1-204ENST00000545686 WIPF2Q8TF74 440 aaPredicted RBP7.18□□□□□ -1.26
TDP1-204ENST00000545686 IGF2BP2-AS1Q96M15 143 aa7.18□□□□□ -1.26
TDP1-204ENST00000545686 RBM14Q96PK6 669 aaKnown RBP7.18□□□□□ -1.26
TDP1-204ENST00000545686 MRPL32Q9BYC8 188 aaKnown RBP7.18□□□□□ -1.26
TDP1-204ENST00000545686 PLEKHA3Q9HB20 300 aa7.18□□□□□ -1.26
TDP1-204ENST00000545686 DCAF16Q9NXF7 216 aa7.18□□□□□ -1.26
TDP1-204ENST00000545686 MRPL27Q9P0M9 148 aaKnown RBP7.18□□□□□ -1.26
TDP1-204ENST00000545686 UQCR10Q9UDW1 63 aa7.18□□□□□ -1.26
TDP1-204ENST00000545686 OR51B2Q9Y5P1 312 aa7.18□□□□□ -1.26
TDP1-204ENST00000545686 INTS1Q8N201 2190 aaKnown RBP7.18□□□□□ -1.26
TDP1-204ENST00000545686 A0A1W2PS18 150 aa7.18□□□□□ -1.26
TDP1-204ENST00000545686 LNP1A1A4G5 178 aa7.18□□□□□ -1.26
TDP1-204ENST00000545686 A6NNC1 897 aa7.18□□□□□ -1.26
TDP1-204ENST00000545686 SAA2P0DJI9 122 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms