RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 SCPEP1Q9HB40 452 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 COMMD9Q9P000 198 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 PEF1Q9UBV8 284 aaKnown RBP5.87□□□□□ -1.47
SNHG1-223ENST00000545440 SMIM31A0A1B0GVY4 71 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 TEX22C9J3V5 150 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 SULT1C2O00338 296 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 RBMXL2O75526 392 aaKnown RBP5.86□□□□□ -1.47
SNHG1-223ENST00000545440 HPRT1P00492 218 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 IGLV1-51P01701 117 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 FCER2P06734 321 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 NHLRC4P0CG21 123 aaPredicted RBP5.86□□□□□ -1.47
SNHG1-223ENST00000545440 GP9P14770 177 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 NQO2P16083 231 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 SPNP16150 400 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 HLA-GP17693 338 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 RORCP51449 518 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 DEFA5Q01523 94 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 EXOSC2Q13868 293 aaKnown RBP5.86□□□□□ -1.47
SNHG1-223ENST00000545440 KLF5Q13887 457 aaPredicted RBP5.86□□□□□ -1.47
SNHG1-223ENST00000545440 CTF1Q16619 201 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 RPEL1Q2QD12 228 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 AADACL3Q5VUY0 350 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 OR4A47Q6IF82 309 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 ANKRD13BQ86YJ7 626 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 OR9G4Q8NGQ1 327 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 OR51H1Q8NH63 302 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 GPX8Q8TED1 209 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 ZNF2Q9BSG1 426 aaPredicted RBP5.86□□□□□ -1.47
SNHG1-223ENST00000545440 FXYD6Q9H0Q3 95 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 PLEKHA2Q9HB19 425 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 SLC2A9Q9NRM0 540 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 COMMD3Q9UBI1 195 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 SMAD5-AS1Q9Y6J3 95 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 DNAH9Q9NYC9 4486 aa5.86□□□□□ -1.47
SNHG1-223ENST00000545440 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.85□□□□□ -1.47
SNHG1-223ENST00000545440 A0A1B0GW64 132 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 DPPA5A6NC42 116 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 DHFRP00374 187 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 TRBV12-3P01733 135 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 PMP2P02689 132 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 PRH1P02810 166 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 RLN1P04808 185 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 CRYGCP07315 174 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 GNRHRP30968 328 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 RCVRNP35243 200 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 HRH1P35367 487 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 RFX2P48378 723 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 ATP5G2Q06055 141 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 TATDN3Q17R31 274 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 KLK9Q2XQG4 91 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 C15orf32Q32M92 178 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 THOC7Q6I9Y2 204 aaKnown RBP5.85□□□□□ -1.47
SNHG1-223ENST00000545440 SSX9Q7RTT3 188 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 CMTM1Q8IZ96 169 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 CADM3Q8N126 398 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 OR6F1Q8NGZ6 308 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 DAZAP1Q96EP5 407 aaKnown RBP5.85□□□□□ -1.47
SNHG1-223ENST00000545440 FYTTD1Q96QD9 318 aaKnown RBP5.85□□□□□ -1.47
SNHG1-223ENST00000545440 SRSF8Q9BRL6 282 aaKnown RBP5.85□□□□□ -1.47
SNHG1-223ENST00000545440 MRPS26Q9BYN8 205 aaKnown RBP5.85□□□□□ -1.47
SNHG1-223ENST00000545440 HRASLSQ9HDD0 168 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 SIGLEC8Q9NYZ4 499 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 PEMTQ9UBM1 199 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 KLK9Q9UKQ9 250 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 STAB2Q8WWQ8 2551 aa5.85□□□□□ -1.47
SNHG1-223ENST00000545440 IGLC7A0M8Q6 106 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 CGB1A6NKQ9 187 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 E7EUB6 86 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 BMPR1BO00238 502 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 GPR31O00270 319 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 UPK2O00526 184 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 HPGDSO60760 199 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 OR2J3O76001 311 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 TPPPO94811 219 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 S1PR2O95136 353 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 AREGP15514 252 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 HIST1H1BP16401 226 aaKnown RBP5.84□□□□□ -1.47
SNHG1-223ENST00000545440 CTRB1P17538 263 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 ELK1P19419 428 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 F2RP25116 425 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 HLA-DMAP28067 261 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 PSMB6P28072 239 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 SYNJ2BPP57105 145 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 OR2B8PP59922 312 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 ERVK-16P61578 105 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 LCE3BQ5TA77 95 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 CTRB2Q6GPI1 263 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 IL34Q6ZMJ4 242 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 HSD17B13Q7Z5P4 300 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-223ENST00000545440 SNX29P2Q8IUI4 249 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 DMBX1Q8NFW5 382 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 DGCR14Q96DF8 476 aaKnown RBP5.84□□□□□ -1.47
SNHG1-223ENST00000545440 KRTAP9-2Q9BYQ4 174 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 COMMD5Q9GZQ3 224 aa5.84□□□□□ -1.47
SNHG1-223ENST00000545440 NAA50Q9GZZ1 169 aaKnown RBP5.84□□□□□ -1.47
SNHG1-223ENST00000545440 FAM212BQ9NTI7 297 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-223ENST00000545440 IGLV11-55A0A075B6I3 123 aa5.83□□□□□ -1.48
SNHG1-223ENST00000545440 H0Y980 276 aa5.83□□□□□ -1.48
SNHG1-223ENST00000545440 PGLYRP1O75594 196 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-223ENST00000545440 CSN3P07498 182 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms