RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 S100A5P33763 92 aa12.06□□□□□ -0.48
CCDC78-216ENST00000544996 SYNJ2BPP57105 145 aa12.06□□□□□ -0.48
CCDC78-216ENST00000544996 H2BFWTQ7Z2G1 175 aa12.06□□□□□ -0.48
CCDC78-216ENST00000544996 OR9G4Q8NGQ1 327 aa12.06□□□□□ -0.48
CCDC78-216ENST00000544996 PRR25Q96S07 402 aa12.06□□□□□ -0.48
CCDC78-216ENST00000544996 HINT2Q9BX68 163 aa12.06□□□□□ -0.48
CCDC78-216ENST00000544996 THYN1Q9P016 225 aa12.06□□□□□ -0.48
CCDC78-216ENST00000544996 OR51B2Q9Y5P1 312 aa12.06□□□□□ -0.48
CCDC78-216ENST00000544996 TNCP24821 2201 aa12.06□□□□□ -0.48
CCDC78-216ENST00000544996 H0Y980 276 aa12.05□□□□□ -0.48
CCDC78-216ENST00000544996 ZNF701M0R085 212 aaPredicted RBP12.05□□□□□ -0.48
CCDC78-216ENST00000544996 GSTZ1O43708 216 aaPredicted RBP12.05□□□□□ -0.48
CCDC78-216ENST00000544996 ATG12O94817 140 aa12.05□□□□□ -0.48
CCDC78-216ENST00000544996 OR13C7P0DN81 318 aa12.05□□□□□ -0.48
CCDC78-216ENST00000544996 C19orf35Q6ZS72 473 aa12.05□□□□□ -0.48
CCDC78-216ENST00000544996 OR10W1Q8NGF6 305 aa12.05□□□□□ -0.48
CCDC78-216ENST00000544996 OR13C8Q8NGS7 320 aa12.05□□□□□ -0.48
CCDC78-216ENST00000544996 OR5B3Q8NH48 314 aa12.05□□□□□ -0.48
CCDC78-216ENST00000544996 OR4A16Q8NH70 328 aa12.05□□□□□ -0.48
CCDC78-216ENST00000544996 MARCH1Q8TCQ1 289 aa12.05□□□□□ -0.48
CCDC78-216ENST00000544996 EEF1AKMT3Q96AZ1 226 aa12.05□□□□□ -0.48
CCDC78-216ENST00000544996 TMEM56Q96MV1 263 aa12.05□□□□□ -0.48
CCDC78-216ENST00000544996 FANCD2OSQ96PS1 177 aa12.05□□□□□ -0.48
CCDC78-216ENST00000544996 PRRT1Q99946 306 aa12.05□□□□□ -0.48
CCDC78-216ENST00000544996 C14orf166Q9Y224 244 aaKnown RBP12.05□□□□□ -0.48
CCDC78-216ENST00000544996 NSG2Q9Y328 171 aa12.05□□□□□ -0.48
CCDC78-216ENST00000544996 IGLV11-55A0A075B6I3 123 aa12.04□□□□□ -0.48
CCDC78-216ENST00000544996 C3orf85A0A1B0GTC6 90 aa12.04□□□□□ -0.48
CCDC78-216ENST00000544996 B3GALNT1O75752 331 aa12.04□□□□□ -0.48
CCDC78-216ENST00000544996 NDUFB8O95169 186 aa12.04□□□□□ -0.48
CCDC78-216ENST00000544996 CTSDP07339 412 aaPredicted RBP12.04□□□□□ -0.48
CCDC78-216ENST00000544996 SURF2Q15527 256 aaPredicted RBP12.04□□□□□ -0.48
CCDC78-216ENST00000544996 KLK9Q2XQG4 91 aa12.04□□□□□ -0.48
CCDC78-216ENST00000544996 FAAP20Q6NZ36 180 aa12.04□□□□□ -0.48
CCDC78-216ENST00000544996 OR4C16Q8NGL9 310 aa12.04□□□□□ -0.48
CCDC78-216ENST00000544996 LSM10Q969L4 123 aaKnown RBP12.04□□□□□ -0.48
CCDC78-216ENST00000544996 MRGPRFQ96AM1 343 aa12.04□□□□□ -0.48
CCDC78-216ENST00000544996 SEC22AQ96IW7 307 aa12.04□□□□□ -0.48
CCDC78-216ENST00000544996 CXorf58Q96LI9 332 aa12.04□□□□□ -0.48
CCDC78-216ENST00000544996 SOSTQ9BQB4 213 aa12.04□□□□□ -0.48
CCDC78-216ENST00000544996 RBM38Q9H0Z9 239 aaKnown RBP12.04□□□□□ -0.48
CCDC78-216ENST00000544996 NDUFA4L2Q9NRX3 87 aa12.04□□□□□ -0.48
CCDC78-216ENST00000544996 TMEM14BQ9NUH8 114 aa12.04□□□□□ -0.48
CCDC78-216ENST00000544996 PEMTQ9UBM1 199 aa12.04□□□□□ -0.48
CCDC78-216ENST00000544996 KLK9Q9UKQ9 250 aa12.04□□□□□ -0.48
CCDC78-216ENST00000544996 PRKDCP78527 4128 aaKnown RBP12.04□□□□□ -0.48
CCDC78-216ENST00000544996 ANKRD20A5PA0PJZ0 165 aa12.03□□□□□ -0.48
CCDC78-216ENST00000544996 C15orf61A6NNL5 157 aa12.03□□□□□ -0.48
CCDC78-216ENST00000544996 BMPR1BO00238 502 aa12.03□□□□□ -0.48
CCDC78-216ENST00000544996 GGCTO75223 188 aaKnown RBP12.03□□□□□ -0.48
CCDC78-216ENST00000544996 IGKV1-39P01597 117 aa12.03□□□□□ -0.48
CCDC78-216ENST00000544996 IGKV1D-39P04432 117 aa12.03□□□□□ -0.48
CCDC78-216ENST00000544996 MECP2P51608 486 aaKnown RBP12.03□□□□□ -0.48
CCDC78-216ENST00000544996 TRIM16LQ309B1 348 aa12.03□□□□□ -0.48
CCDC78-216ENST00000544996 GDPD1Q8N9F7 314 aa12.03□□□□□ -0.48
CCDC78-216ENST00000544996 TP53RKQ96S44 253 aa12.03□□□□□ -0.48
CCDC78-216ENST00000544996 THAP7Q9BT49 309 aaPredicted RBP12.03□□□□□ -0.48
CCDC78-216ENST00000544996 TRBV7-1A0A0A6YYK4 115 aa12.02□□□□□ -0.49
CCDC78-216ENST00000544996 SPNP16150 400 aa12.02□□□□□ -0.49
CCDC78-216ENST00000544996 AKR1C2P52895 323 aa12.02□□□□□ -0.49
CCDC78-216ENST00000544996 WT1-ASQ06250 92 aa12.02□□□□□ -0.49
CCDC78-216ENST00000544996 PYDC2Q56P42 97 aa12.02□□□□□ -0.49
CCDC78-216ENST00000544996 SLC25A24Q6NUK1 477 aa12.02□□□□□ -0.49
CCDC78-216ENST00000544996 CLEC19AQ6UXS0 136 aa12.02□□□□□ -0.49
CCDC78-216ENST00000544996 OR51S1Q8NGJ8 323 aa12.02□□□□□ -0.49
CCDC78-216ENST00000544996 MCUBQ9NWR8 336 aa12.02□□□□□ -0.49
CCDC78-216ENST00000544996 SCP2D1Q9UJQ7 156 aa12.02□□□□□ -0.49
CCDC78-216ENST00000544996 TGP01266 2768 aa12.01□□□□□ -0.49
CCDC78-216ENST00000544996 TEX13DA0A0J9YY54 714 aaPredicted RBP12.01□□□□□ -0.49
CCDC78-216ENST00000544996 PPP5D1E7EU14 171 aa12.01□□□□□ -0.49
CCDC78-216ENST00000544996 IGLV1-51P01701 117 aa12.01□□□□□ -0.49
CCDC78-216ENST00000544996 IGHV3-23P01764 117 aa12.01□□□□□ -0.49
CCDC78-216ENST00000544996 ARL3P36405 182 aa12.01□□□□□ -0.49
CCDC78-216ENST00000544996 CD69Q07108 199 aa12.01□□□□□ -0.49
CCDC78-216ENST00000544996 SP6Q3SY56 376 aa12.01□□□□□ -0.49
CCDC78-216ENST00000544996 OR1L6Q8NGR2 347 aa12.01□□□□□ -0.49
CCDC78-216ENST00000544996 CCDC140Q96MF4 163 aa12.01□□□□□ -0.49
CCDC78-216ENST00000544996 SCGB3A2Q96PL1 93 aa12.01□□□□□ -0.49
CCDC78-216ENST00000544996 LSM4Q9Y4Z0 139 aaKnown RBP12.01□□□□□ -0.49
CCDC78-216ENST00000544996 S4R3C0 116 aa12.01□□□□□ -0.49
CCDC78-216ENST00000544996 MFSD2BA6NFX1 497 aa12□□□□□ -0.49
CCDC78-216ENST00000544996 DBX1A6NMT0 343 aa12□□□□□ -0.49
CCDC78-216ENST00000544996 OR2C1O95371 312 aa12□□□□□ -0.49
CCDC78-216ENST00000544996 GP9P14770 177 aa12□□□□□ -0.49
CCDC78-216ENST00000544996 UCP1P25874 307 aa12□□□□□ -0.49
CCDC78-216ENST00000544996 FAUP35544 74 aaKnown RBP12□□□□□ -0.49
CCDC78-216ENST00000544996 AP3S2P59780 193 aa12□□□□□ -0.49
CCDC78-216ENST00000544996 HSPE1P61604 102 aaKnown RBP12□□□□□ -0.49
CCDC78-216ENST00000544996 IL34Q6ZMJ4 242 aa12□□□□□ -0.49
CCDC78-216ENST00000544996 RNASE11Q8TAA1 199 aaKnown RBP12□□□□□ -0.49
CCDC78-216ENST00000544996 VN1R17PQ8TDU5 208 aa12□□□□□ -0.49
CCDC78-216ENST00000544996 RRNAD1Q96FB5 475 aaKnown RBP12□□□□□ -0.49
CCDC78-216ENST00000544996 B9D2Q9BPU9 175 aa12□□□□□ -0.49
CCDC78-216ENST00000544996 RTBDNQ9BSG5 229 aaPredicted RBP12□□□□□ -0.49
CCDC78-216ENST00000544996 SLC2A8Q9NY64 477 aa12□□□□□ -0.49
CCDC78-216ENST00000544996 SIGLEC8Q9NYZ4 499 aa12□□□□□ -0.49
CCDC78-216ENST00000544996 F11RQ9Y624 299 aaKnown RBP12□□□□□ -0.49
CCDC78-216ENST00000544996 HLA-AP01891 365 aaKnown RBP11.99□□□□□ -0.49
CCDC78-216ENST00000544996 CLEC3BP05452 202 aa11.99□□□□□ -0.49
CCDC78-216ENST00000544996 CSN3P07498 182 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms