RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	IGHV3-7	P01780	117 aa		1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	C1QA	P02745	245 aa		1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	TPM3	P06753	285 aa		1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	FAM228B	P0C875	321 aa		1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	FGF6	P10767	208 aa		1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	KCNE1	P15382	129 aa		1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	MAGEA2	P43356	314 aa		1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	MARCKSL1	P49006	195 aa		1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	NAA20	P61599	178 aa		1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	CAV1	Q03135	178 aa		1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	KIF24	Q5T7B8	1368 aa		1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	OGFRL1	Q5TC84	451 aa	Predicted RBP	1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	ALPK2	Q86TB3	2170 aa		1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	DHFR2	Q86XF0	187 aa		1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	OR5B17	Q8NGF7	314 aa		1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	TONSL	Q96HA7	1378 aa		1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	USE1	Q9NZ43	259 aa		1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	FUT9	Q9Y231	359 aa		1.02	□□□□□ -2.25
RAP1B-231	ENST00000544639	ROS1	P08922	2347 aa		1.01	□□□□□ -2.25
RAP1B-231	ENST00000544639	NOS1AP	O75052	506 aa	Predicted RBP	1.01	□□□□□ -2.25
RAP1B-231	ENST00000544639	UCHL3	P15374	230 aa		1.01	□□□□□ -2.25
RAP1B-231	ENST00000544639	CCR7	P32248	378 aa		1.01	□□□□□ -2.25
RAP1B-231	ENST00000544639	FXYD2	P54710	66 aa		1.01	□□□□□ -2.25
RAP1B-231	ENST00000544639	RPL18	Q07020	188 aa	Known RBP	1.01	□□□□□ -2.25
RAP1B-231	ENST00000544639	GID4	Q8IVV7	300 aa		1.01	□□□□□ -2.25
RAP1B-231	ENST00000544639	GPR32P1	Q8NGA4	272 aa		1.01	□□□□□ -2.25
RAP1B-231	ENST00000544639	BAIAP2	Q9UQB8	552 aa		1.01	□□□□□ -2.25
RAP1B-231	ENST00000544639	DCC	P43146	1447 aa		1	□□□□□ -2.25
RAP1B-231	ENST00000544639	GGT3P	A6NGU5	568 aa		1	□□□□□ -2.25
RAP1B-231	ENST00000544639	SDCBP	O00560	298 aa	Predicted RBP	1	□□□□□ -2.25
RAP1B-231	ENST00000544639	IL9	P15248	144 aa		1	□□□□□ -2.25
RAP1B-231	ENST00000544639	TPM4	P67936	248 aa		1	□□□□□ -2.25
RAP1B-231	ENST00000544639	NDUFA5	Q16718	116 aa		1	□□□□□ -2.25
RAP1B-231	ENST00000544639	GLT8D1	Q68CQ7	371 aa		1	□□□□□ -2.25
RAP1B-231	ENST00000544639	SFXN4	Q6P4A7	337 aa		1	□□□□□ -2.25
RAP1B-231	ENST00000544639	ZNF439	Q8NDP4	499 aa		1	□□□□□ -2.25
RAP1B-231	ENST00000544639	CNBD2	Q96M20	576 aa		1	□□□□□ -2.25
RAP1B-231	ENST00000544639	FAM96A	Q9H5X1	160 aa		1	□□□□□ -2.25
RAP1B-231	ENST00000544639	IL36B	Q9NZH7	164 aa		1	□□□□□ -2.25
RAP1B-231	ENST00000544639	RALGAPA2	Q2PPJ7	1873 aa		1	□□□□□ -2.25
RAP1B-231	ENST00000544639	MICAL3	Q7RTP6	2002 aa		0.99	□□□□□ -2.25
RAP1B-231	ENST00000544639	MAST2	Q6P0Q8	1798 aa		0.99	□□□□□ -2.25
RAP1B-231	ENST00000544639	INMT-MINDY4	F8WBC2	141 aa		0.99	□□□□□ -2.25
RAP1B-231	ENST00000544639	KRT7	P08729	469 aa		0.99	□□□□□ -2.25
RAP1B-231	ENST00000544639	NFYA	P23511	347 aa	Predicted RBP	0.99	□□□□□ -2.25
RAP1B-231	ENST00000544639	ZNF345	Q14585	488 aa		0.99	□□□□□ -2.25
RAP1B-231	ENST00000544639	SURF2	Q15527	256 aa	Predicted RBP	0.99	□□□□□ -2.25
RAP1B-231	ENST00000544639	CD200R1L	Q6Q8B3	271 aa		0.99	□□□□□ -2.25
RAP1B-231	ENST00000544639	OR51I1	Q9H343	314 aa		0.99	□□□□□ -2.25
RAP1B-231	ENST00000544639	EFCAB1	Q9HAE3	211 aa		0.99	□□□□□ -2.25
RAP1B-231	ENST00000544639	CISH	Q9NSE2	258 aa		0.99	□□□□□ -2.25
RAP1B-231	ENST00000544639	NKIRAS1	Q9NYS0	192 aa		0.99	□□□□□ -2.25
RAP1B-231	ENST00000544639	GLI3	P10071	1580 aa		0.99	□□□□□ -2.25
RAP1B-231	ENST00000544639	SETD5	Q9C0A6	1442 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	EVC2	Q86UK5	1308 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	IRGM	A1A4Y4	181 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	ACOX3	O15254	700 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	PRM2	P04554	102 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	ISG15	P05161	165 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	METTL15P1	P0C7V9	234 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	UBB	P0CG47	229 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	ZNF80	P51504	273 aa	Predicted RBP	0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	RAB5B	P61020	215 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	SUPT4H1	P63272	117 aa	Known RBP	0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	CTAG1A	P78358	180 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	CCL20	P78556	96 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	PLCXD2	Q0VAA5	305 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	GUK1	Q16774	197 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	COQ5	Q5HYK3	327 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	SYPL2	Q5VXT5	272 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	YIPF3	Q9GZM5	350 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	XPNPEP1	Q9NQW7	623 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	CACNA1B	Q00975	2339 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	C9orf84	Q5VXU9	1444 aa		0.98	□□□□□ -2.25
RAP1B-231	ENST00000544639	TRBV20OR9-2	A0A075B6H5	130 aa		0.97	□□□□□ -2.25
RAP1B-231	ENST00000544639		A0A0J9YY10	115 aa		0.97	□□□□□ -2.25
RAP1B-231	ENST00000544639		A0A1B0GX78	115 aa		0.97	□□□□□ -2.25
RAP1B-231	ENST00000544639	FABP5P3	A8MUU1	101 aa		0.97	□□□□□ -2.25
RAP1B-231	ENST00000544639	PMP2	P02689	132 aa		0.97	□□□□□ -2.25
RAP1B-231	ENST00000544639	RPS4Y1	P22090	263 aa	Known RBP	0.97	□□□□□ -2.25
RAP1B-231	ENST00000544639	IBA57	Q5T440	356 aa	Known RBP	0.97	□□□□□ -2.25
RAP1B-231	ENST00000544639	C10orf67	Q8IYJ2	551 aa		0.97	□□□□□ -2.25
RAP1B-231	ENST00000544639	NCOA6	Q14686	2063 aa	Predicted RBP	0.96	□□□□□ -2.25
RAP1B-231	ENST00000544639		A0A1B0GV50	99 aa		0.96	□□□□□ -2.26
RAP1B-231	ENST00000544639	HCRT	O43612	131 aa		0.96	□□□□□ -2.26
RAP1B-231	ENST00000544639	CLPS	P04118	112 aa		0.96	□□□□□ -2.26
RAP1B-231	ENST00000544639	AP2S1	P53680	142 aa	Predicted RBP	0.96	□□□□□ -2.26
RAP1B-231	ENST00000544639	TCL1A	P56279	114 aa		0.96	□□□□□ -2.26
RAP1B-231	ENST00000544639	PMAIP1	Q13794	54 aa		0.96	□□□□□ -2.26
RAP1B-231	ENST00000544639	COTL1	Q14019	142 aa		0.96	□□□□□ -2.26
RAP1B-231	ENST00000544639	KISS1	Q15726	138 aa		0.96	□□□□□ -2.26
RAP1B-231	ENST00000544639	C10orf55	Q5SWW7	151 aa		0.96	□□□□□ -2.26
RAP1B-231	ENST00000544639	ALKAL1	Q6UXT8	129 aa		0.96	□□□□□ -2.26
RAP1B-231	ENST00000544639	OR2T4	Q8NH00	348 aa		0.96	□□□□□ -2.26
RAP1B-231	ENST00000544639	C11orf40	Q8WZ69	217 aa		0.96	□□□□□ -2.26
RAP1B-231	ENST00000544639	PTH2	Q96A98	100 aa		0.96	□□□□□ -2.26
RAP1B-231	ENST00000544639	OPTN	Q96CV9	577 aa		0.96	□□□□□ -2.26
RAP1B-231	ENST00000544639	REG4	Q9BYZ8	158 aa		0.96	□□□□□ -2.26
RAP1B-231	ENST00000544639	CCDC88A	Q3V6T2	1871 aa		0.96	□□□□□ -2.26
RAP1B-231	ENST00000544639	TMEM212	A6NML5	194 aa		0.95	□□□□□ -2.26

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms