RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 CRYBG3Q68DQ2 2970 aa11.36□□□□□ -0.59
MSH2-206ENST00000543555 SRRM4A7MD48 611 aaKnown RBP11.35□□□□□ -0.59
MSH2-206ENST00000543555 NDUFB3O43676 98 aa11.35□□□□□ -0.59
MSH2-206ENST00000543555 LYPD2Q6UXB3 125 aa11.35□□□□□ -0.59
MSH2-206ENST00000543555 CTDSP1Q9GZU7 261 aa11.35□□□□□ -0.59
MSH2-206ENST00000543555 DCHS2Q6V1P9 2916 aa11.35□□□□□ -0.59
MSH2-206ENST00000543555 J3QR06 171 aa11.35□□□□□ -0.59
MSH2-206ENST00000543555 PRCDQ00LT1 54 aa11.35□□□□□ -0.59
MSH2-206ENST00000543555 ADIRFQ15847 76 aa11.35□□□□□ -0.59
MSH2-206ENST00000543555 H1FXQ92522 213 aaKnown RBP11.35□□□□□ -0.59
MSH2-206ENST00000543555 BBC3Q96PG8 261 aaPredicted RBP11.35□□□□□ -0.59
MSH2-206ENST00000543555 MRPL20Q9BYC9 149 aaKnown RBP11.35□□□□□ -0.59
MSH2-206ENST00000543555 AP4M1O00189 453 aa11.35□□□□□ -0.59
MSH2-206ENST00000543555 LRRC10Q5BKY1 277 aa11.35□□□□□ -0.59
MSH2-206ENST00000543555 NEIL1Q96FI4 390 aaPredicted RBP11.35□□□□□ -0.59
MSH2-206ENST00000543555 PLEKHA3Q9HB20 300 aa11.35□□□□□ -0.59
MSH2-206ENST00000543555 KCNIP2Q9NS61 270 aa11.35□□□□□ -0.59
MSH2-206ENST00000543555 C11orf94C9JXX5 98 aa11.34□□□□□ -0.59
MSH2-206ENST00000543555 MEOX2P50222 304 aa11.34□□□□□ -0.59
MSH2-206ENST00000543555 SSX3Q99909 188 aa11.34□□□□□ -0.59
MSH2-206ENST00000543555 BET1LQ9NYM9 111 aa11.34□□□□□ -0.59
MSH2-206ENST00000543555 CTSZQ9UBR2 303 aa11.34□□□□□ -0.59
MSH2-206ENST00000543555 SAA1P0DJI8 122 aaPredicted RBP11.34□□□□□ -0.59
MSH2-206ENST00000543555 UQCRFS1P47985 274 aa11.34□□□□□ -0.59
MSH2-206ENST00000543555 RPL23P62829 140 aaKnown RBP11.34□□□□□ -0.59
MSH2-206ENST00000543555 TEPPQ6URK8 271 aa11.34□□□□□ -0.59
MSH2-206ENST00000543555 APOA2P02652 100 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 KIAA0141Q14154 515 aaPredicted RBP11.33□□□□□ -0.6
MSH2-206ENST00000543555 BSXQ3C1V8 233 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 OSR1Q8TAX0 266 aaPredicted RBP11.33□□□□□ -0.6
MSH2-206ENST00000543555 SSMEM1Q8WWF3 244 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 ABCA4P78363 2273 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 YLPM1P49750 1951 aaKnown RBP11.33□□□□□ -0.6
MSH2-206ENST00000543555 TEX50A0A1B0GTY4 177 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 H0YJW9 148 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 DVL1O14640 695 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 OPN1MWP04001 364 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 STAG3L2P0CL84 134 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 STAG3L3P0CL85 134 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 OPN1MW2P0DN77 364 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 OPN1MW3P0DN78 364 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 B2MP61769 119 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 FAM210BQ96KR6 192 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 FKBP11Q9NYL4 201 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 CENPEQ02224 2701 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 FNDC10F2Z333 226 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 LOXP28300 417 aaPredicted RBP11.33□□□□□ -0.6
MSH2-206ENST00000543555 OR5AN1Q8NGI8 311 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 KAAG1Q9UBP8 84 aa11.33□□□□□ -0.6
MSH2-206ENST00000543555 AKAP6Q13023 2319 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 S100A8P05109 93 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 ARL14EPLP0DKL9 152 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 NPPCP23582 126 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 APOBEC3AP31941 199 aaPredicted RBP11.32□□□□□ -0.6
MSH2-206ENST00000543555 UBE2G2P60604 165 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 RAB31Q13636 194 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 EFNB3Q15768 340 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 OR5B3Q8NH48 314 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 HARBI1Q96MB7 349 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 PKDREJQ9NTG1 2253 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.32□□□□□ -0.6
MSH2-206ENST00000543555 PCP4L1A6NKN8 68 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 PDE6DO43924 150 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 CD3EP07766 207 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 ATP5G3P48201 142 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 REG1BP48304 166 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 SPNS3Q6ZMD2 512 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 C16orf82Q7Z2V1 217 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 STPG3Q8N7X2 389 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 OR10X1Q8NGY0 326 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 ZNF596Q8TC21 504 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 ABHD5Q8WTS1 349 aa11.32□□□□□ -0.6
MSH2-206ENST00000543555 USP9XQ93008 2570 aaPredicted RBP11.32□□□□□ -0.6
MSH2-206ENST00000543555 TRBV24-1A0A075B6N3 115 aa11.31□□□□□ -0.6
MSH2-206ENST00000543555 CXorf1O96002 111 aa11.31□□□□□ -0.6
MSH2-206ENST00000543555 RPL29P47914 159 aaKnown RBP11.31□□□□□ -0.6
MSH2-206ENST00000543555 CDSNQ15517 529 aa11.31□□□□□ -0.6
MSH2-206ENST00000543555 TMEM177Q53S58 311 aa11.31□□□□□ -0.6
MSH2-206ENST00000543555 FAM71F2Q6NXP2 309 aa11.31□□□□□ -0.6
MSH2-206ENST00000543555 LINC00311Q8N616 119 aa11.31□□□□□ -0.6
MSH2-206ENST00000543555 C8orf31Q8N9H6 132 aa11.31□□□□□ -0.6
MSH2-206ENST00000543555 TACC2O95359 2948 aa11.31□□□□□ -0.6
MSH2-206ENST00000543555 MAP1AP78559 2803 aaPredicted RBP11.31□□□□□ -0.6
MSH2-206ENST00000543555 IGHV1-69-2A0A0G2JMI3 117 aa11.31□□□□□ -0.6
MSH2-206ENST00000543555 TMEM8BA6NDV4 472 aa11.31□□□□□ -0.6
MSH2-206ENST00000543555 B9A039 149 aa11.31□□□□□ -0.6
MSH2-206ENST00000543555 DLX6P56179 175 aa11.31□□□□□ -0.6
MSH2-206ENST00000543555 CST9LP1Q5W188 147 aa11.31□□□□□ -0.6
MSH2-206ENST00000543555 TRGC2P03986 189 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 IGFBP2P18065 325 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 ATP5IP56385 69 aaPredicted RBP11.3□□□□□ -0.6
MSH2-206ENST00000543555 C2orf83Q53S99 150 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 OR51G1Q8NGK1 321 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 TMEM186Q96B77 213 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 FAM208BQ5VWN6 2430 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 CCL21O00585 134 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 VENTXO95231 258 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 CASP6P55212 293 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 GNB1P62873 340 aa11.3□□□□□ -0.6
MSH2-206ENST00000543555 PRR20EP86478 221 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms