RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TMPRSS5Q9H3S3 457 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 AP5S1Q9NUS5 200 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 TRAPPC1Q9Y5R8 145 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 FNDC1Q4ZHG4 1894 aaPredicted RBP5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 IGHV3-35A0A0C4DH35 117 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 RBFOX3A6NFN3 312 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 C5orf52A6NGY3 159 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 FAM90A26D6RGX4 464 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 PHOX2AO14813 284 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 PAGE4O60829 102 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 NPIPB7O75200 414 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 S1PR2O95136 353 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 PLAUP00749 431 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 SNRPCP09234 159 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 RPL7P18124 248 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 MAS1LP35410 378 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 UBE2V1Q13404 147 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 C4orf48Q5BLP8 95 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 CD200R1LQ6Q8B3 271 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 PRSS33Q8NF86 280 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 GPHA2Q96T91 129 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 NXF2Q9GZY0 626 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 FBXL15Q9H469 300 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 ARL2-SNX15V9GYD0 113 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 RLFQ13129 1914 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 HEATR1Q9H583 2144 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 TMSB15BA0A087X1C1 80 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 C1QTNF9BB2RNN3 333 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 C1QTNF9P0C862 333 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 SNRPD3P62318 126 aaKnown RBP5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 TTC32Q5I0X7 151 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 TMEM255AQ5JRV8 349 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 PLA2G2CQ5R387 149 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 LRRC75AQ8NAA5 344 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 MAP1LC3AQ9H492 121 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 GSX1Q9H4S2 264 aaPredicted RBP5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 GSN-AS1Q9NRJ2 163 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 FAM181BA6NEQ2 426 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 MFNGO00587 321 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 KIR2DL2P43627 348 aaPredicted RBP5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 RIGQ13278 110 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 ZNF79Q15937 498 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 BSXQ3C1V8 233 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 TMEM18Q96B42 140 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 SLC25A38Q96DW6 304 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 VAX2Q9UIW0 290 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 TMEM89A2RUT3 159 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 PLA2G10O15496 165 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 RPL39P5Q59GN2 51 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 SHISA2Q6UWI4 295 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 VKORC1L1Q8N0U8 176 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 TMEM252Q8N6L7 170 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 OR10G8Q8NGN5 311 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 PRSS22Q9GZN4 317 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 A0A0G2JNJ9 132 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 J3QKU1 62 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 CXCL3P19876 107 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 SERF2P84101 59 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 OR13A1Q8NGR1 328 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 WBP1Q96G27 269 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 Q9UFV3 132 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 VWA8A3KMH1 1905 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 DOCK4Q8N1I0 1966 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 AP4M1O00189 453 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 RAMP3O60896 148 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 ATP6V0CP27449 155 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 PNRC1Q12796 327 aaPredicted RBP5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 ZNF672Q499Z4 452 aaPredicted RBP5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 CLLU1Q5K131 121 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 TMEM88Q6PEY1 159 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 PRNTQ86SH4 94 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 GGNQ86UU5 652 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 OR5AU1Q8NGC0 362 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 GPR146Q96CH1 333 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 PPP1R3EQ9H7J1 279 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 NAT8Q9UHE5 227 aa5.81□□□□□ -1.48
SRGAP1-206ENST00000543397 ZSWIM8A7E2V4 1837 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 PITX3O75364 302 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 MOSP00540 346 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 FABP4P15090 132 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 CCL3L1P16619 93 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 TSPOP30536 169 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 NUTF2P61970 127 aaKnown RBP5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 TNFRSF9Q07011 255 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 ZNF146Q15072 292 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 GBGT1Q8N5D6 347 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 SPANXA1Q9NS26 97 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 PGA5P0DJD9 388 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 TEX38Q6PEX7 206 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 PPP1R27Q86WC6 154 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 TMEM37Q8WXS4 190 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 PEF1Q9UBV8 284 aaKnown RBP5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 MPDZO75970 2070 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 TRAV40A0A0B4J280 105 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 TRBV7-9A0A0J9YWB2 115 aa5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 MBD3L4A6NDZ8 208 aaPredicted RBP5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 MBD3L3A6NE82 208 aaPredicted RBP5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 MBD3L5A6NJ08 208 aaPredicted RBP5.8□□□□□ -1.48
SRGAP1-206ENST00000543397 RGS13O14921 159 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms