RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 NABP1Q96AH0 204 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 LINC00470Q9BZP3 86 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 B4GALT7Q9UBV7 327 aa9.47□□□□□ -0.89
CDH4-201ENST00000543233 A0A0G2JLM5 398 aa9.46□□□□□ -0.89
CDH4-201ENST00000543233 F2RL2O00254 374 aa9.46□□□□□ -0.89
CDH4-201ENST00000543233 BRI3O95415 125 aa9.46□□□□□ -0.89
CDH4-201ENST00000543233 GPR183P32249 361 aa9.46□□□□□ -0.89
CDH4-201ENST00000543233 ATP5G3P48201 142 aa9.46□□□□□ -0.89
CDH4-201ENST00000543233 CYB561P49447 251 aa9.46□□□□□ -0.89
CDH4-201ENST00000543233 IGFBP7Q16270 282 aa9.46□□□□□ -0.89
CDH4-201ENST00000543233 OR1F12Q8NHA8 337 aa9.46□□□□□ -0.89
CDH4-201ENST00000543233 OR2T6Q8NHC8 308 aa9.46□□□□□ -0.89
CDH4-201ENST00000543233 NANOS1Q8WY41 292 aaKnown RBP9.46□□□□□ -0.89
CDH4-201ENST00000543233 RNF183Q96D59 192 aa9.46□□□□□ -0.89
CDH4-201ENST00000543233 EAF1Q96JC9 268 aaPredicted RBP9.46□□□□□ -0.89
CDH4-201ENST00000543233 FER1L6-AS2Q96M78 137 aa9.46□□□□□ -0.89
CDH4-201ENST00000543233 OR8B2Q96RD0 313 aa9.46□□□□□ -0.89
CDH4-201ENST00000543233 MBNL3Q9NUK0 354 aaKnown RBP9.46□□□□□ -0.89
CDH4-201ENST00000543233 DMXL1Q9Y485 3027 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 ICE1Q9Y2F5 2266 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 LOC102725191A0A1B0GVB3 256 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 FAM181BA6NEQ2 426 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 H0YJW9 148 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 MPPED1O15442 326 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 DHRS3O75911 302 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 IGKV1D-33P01593 117 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 IGKV1-33P01594 117 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 NPPCP23582 126 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 ZXDAP98168 799 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 IZUMO4Q1ZYL8 232 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 EBLN2Q6P2I7 272 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 C6orf15Q6UXA7 325 aaPredicted RBP9.46□□□□□ -0.9
CDH4-201ENST00000543233 MTURNQ8N3F0 131 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 TMEM251Q8N6I4 163 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 OR8B3Q8NGG8 313 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 DPF1Q92782 380 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 SPTSSAQ969W0 71 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 SLC7A10Q9NS82 523 aa9.46□□□□□ -0.9
CDH4-201ENST00000543233 RALYQ9UKM9 306 aaKnown RBP9.46□□□□□ -0.9
CDH4-201ENST00000543233 C3orf80F5H4A9 247 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 MLNRO43193 412 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 ATP5G2Q06055 141 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 LRTM2Q8N967 370 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 PIGCQ92535 297 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 SCGB2A1O75556 95 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 NPBWR2P48146 333 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 TCTAP57738 103 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 GNB1P62873 340 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 HIST1H1AQ02539 215 aaPredicted RBP9.45□□□□□ -0.9
CDH4-201ENST00000543233 RPEL1Q2QD12 228 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 DHRS13Q6UX07 377 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 OR10G9Q8NGN4 311 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 OR10G7Q8NGN6 311 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 MCRIP2Q9BUT9 160 aaKnown RBP9.45□□□□□ -0.9
CDH4-201ENST00000543233 C9orf118A6NHY6 69 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.45□□□□□ -0.9
CDH4-201ENST00000543233 FOXG1P55316 489 aaPredicted RBP9.45□□□□□ -0.9
CDH4-201ENST00000543233 RHOBP62745 196 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 SERF2P84101 59 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 SPANXN5Q5MJ07 72 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 SCCPDHQ8NBX0 429 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 C11orf1Q9H5F2 150 aa9.45□□□□□ -0.9
CDH4-201ENST00000543233 HSPB6O14558 160 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 TIMP3P35625 211 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 TNXAQ16473 311 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 OR10J3Q5JRS4 329 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 ATP1A1-AS1Q5TC04 95 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 TMEM164Q5U3C3 297 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 ADAMTSL5Q6ZMM2 481 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 BPIFA4PQ86YQ2 179 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 MRPL16Q9NX20 251 aaKnown RBP9.44□□□□□ -0.9
CDH4-201ENST00000543233 IL36BQ9NZH7 164 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 CTXND1A0A1B0GTU2 59 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 A6NDN8 102 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 ANKRD30BLA7E2S9 258 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 LINC00869P0C866 280 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 EIF3IQ13347 325 aaKnown RBP9.44□□□□□ -0.9
CDH4-201ENST00000543233 PIGYQ3MUY2 71 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 SPATA12Q7Z6I5 190 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 MMD2Q8IY49 270 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 TMEM54Q969K7 222 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 FOXB1Q99853 325 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 REPIN1Q9BWE0 567 aaKnown RBP9.44□□□□□ -0.9
CDH4-201ENST00000543233 PRRG4Q9BZD6 226 aa9.44□□□□□ -0.9
CDH4-201ENST00000543233 IGHV3-64DA0A0J9YX35 117 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 PSMB11A5LHX3 300 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 B3GALT5-AS1P59052 145 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 HBG1P69891 147 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 HBG2P69892 147 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 TBC1D26Q86UD7 250 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 GGNQ86UU5 652 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 KIR3DL3Q8N743 410 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 OR5A1Q8NGJ0 315 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 NEU4Q8WWR8 484 aaPredicted RBP9.43□□□□□ -0.9
CDH4-201ENST00000543233 OR4C12Q96R67 309 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 PMCHL2Q9BQD1 86 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 NCKAP5O14513 1909 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 DIDO1Q9BTC0 2240 aaKnown RBP9.43□□□□□ -0.9
CDH4-201ENST00000543233 C19orf67A6NJJ6 358 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 FABP2P12104 132 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms