RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 MPDU1O75352 247 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 LY86O95711 162 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 HIST1H2BJP06899 126 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 HIST1H2BOP23527 126 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 GRNP28799 593 aaKnown RBP11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 HIST1H2BBP33778 126 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 NDUFA6P56556 154 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 HIST1H2BDP58876 126 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 HIST1H2BCP62807 126 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 MLANAQ16655 118 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 HIST2H2BEQ16778 126 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 RTL8BQ17RB0 113 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 BSXQ3C1V8 233 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 CST9LP1Q5W188 147 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 C1orf87Q8N0U7 546 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 STPG3Q8N7X2 389 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 OR5T1Q8NG75 326 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 NANPQ8TBE9 248 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 HIST1H2BHQ93079 126 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 HIST1H2BNQ99877 126 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 HIST1H2BMQ99879 126 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 SEPSECSQ9HD40 501 aaKnown RBP11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 ENY2Q9NPA8 101 aa11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 TPRP12270 2363 aaKnown RBP11.14□□□□□ -0.63
SLC3A2-220ENST00000542922 H0YJW9 148 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 ZZEF1O43149 2961 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 LOXP28300 417 aaPredicted RBP11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 CHRNB4P30926 498 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 B2MP61769 119 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 PRCDQ00LT1 54 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 MEF2CQ06413 473 aaPredicted RBP11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 PLEKHA3Q9HB20 300 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 NPVFQ9HCQ7 196 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 TMEM242Q9NWH2 141 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 DOK5Q9P104 306 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 DCHS2Q6V1P9 2916 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 PGPEP1LA6NFU8 196 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 E7EUB6 86 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 LYNX1G3V0Z9 82 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 FOXH1O75593 365 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 LYNX1P0DP58 116 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 C4orf17Q53FE4 359 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 LINC01560Q8TB33 94 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 FRZBQ92765 325 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 RAB1CQ92928 201 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 HARBI1Q96MB7 349 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 PRNDQ9UKY0 176 aa11.13□□□□□ -0.63
SLC3A2-220ENST00000542922 LRBAP50851 2863 aa11.12□□□□□ -0.63
SLC3A2-220ENST00000542922 ABCA4P78363 2273 aa11.12□□□□□ -0.63
SLC3A2-220ENST00000542922 IGKV1OR2-108A0A075B7D4 117 aa11.12□□□□□ -0.63
SLC3A2-220ENST00000542922 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.12□□□□□ -0.63
SLC3A2-220ENST00000542922 NDUFB3O43676 98 aa11.12□□□□□ -0.63
SLC3A2-220ENST00000542922 STAG3L2P0CL84 134 aa11.12□□□□□ -0.63
SLC3A2-220ENST00000542922 STAG3L3P0CL85 134 aa11.12□□□□□ -0.63
SLC3A2-220ENST00000542922 GFI1BQ5VTD9 330 aa11.12□□□□□ -0.63
SLC3A2-220ENST00000542922 TEPPQ6URK8 271 aa11.12□□□□□ -0.63
SLC3A2-220ENST00000542922 ZNF114Q8NC26 417 aa11.12□□□□□ -0.63
SLC3A2-220ENST00000542922 FAM90A27PA6NNH2 459 aa11.11□□□□□ -0.63
SLC3A2-220ENST00000542922 NDUFB4O95168 129 aa11.11□□□□□ -0.63
SLC3A2-220ENST00000542922 GATA2P23769 480 aaPredicted RBP11.11□□□□□ -0.63
SLC3A2-220ENST00000542922 EFNB3Q15768 340 aa11.11□□□□□ -0.63
SLC3A2-220ENST00000542922 TMEM30BQ3MIR4 351 aa11.11□□□□□ -0.63
SLC3A2-220ENST00000542922 C10orf55Q5SWW7 151 aa11.11□□□□□ -0.63
SLC3A2-220ENST00000542922 COL25A1Q9BXS0 654 aaPredicted RBP11.11□□□□□ -0.63
SLC3A2-220ENST00000542922 YTHDF2Q9Y5A9 579 aaKnown RBP11.11□□□□□ -0.63
SLC3A2-220ENST00000542922 PHOX2AO14813 284 aa11.11□□□□□ -0.63
SLC3A2-220ENST00000542922 ACTL6BO94805 426 aa11.11□□□□□ -0.63
SLC3A2-220ENST00000542922 PFN1P07737 140 aaKnown RBP11.11□□□□□ -0.63
SLC3A2-220ENST00000542922 DLX6P56179 175 aa11.11□□□□□ -0.63
SLC3A2-220ENST00000542922 CTDSP1Q9GZU7 261 aa11.11□□□□□ -0.63
SLC3A2-220ENST00000542922 ZNF257Q9Y2Q1 563 aa11.11□□□□□ -0.63
SLC3A2-220ENST00000542922 ANKHD1Q8IWZ3 2542 aaKnown RBP11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 SCO2A0A1W2PP80 73 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 SIAH2O43255 324 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 LINC00869P0C866 280 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 TRGC1P0CF51 173 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 HOXA5P20719 270 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 CDSNQ15517 529 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 LRRC10Q5BKY1 277 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 OR5AN1Q8NGI8 311 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 OR10X1Q8NGY0 326 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 RITA1Q96K30 269 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 BET1LQ9NYM9 111 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 TRBV20OR9-2A0A075B6H5 130 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 TRBV24-1A0A075B6N3 115 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 H7BYZ3 331 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 APOA2P02652 100 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 S100A8P05109 93 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 RNASE2P10153 161 aaKnown RBP11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 CHRNA7P36544 502 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 PRR20EP86478 221 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 PRR20CP86479 221 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 PRR20DP86480 221 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 PRR20BP86481 221 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 PRR20AP86496 221 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 TMEM249Q2WGJ8 235 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 PDZD11Q5EBL8 140 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 MIR17HGQ75NE6 70 aa11.1□□□□□ -0.63
SLC3A2-220ENST00000542922 OR10A7Q8NGE5 316 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms