RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 CHRNA7P36544 502 aa18.19■□□□□ 0.5
HOMER3-205ENST00000542541 RRAS2P62070 204 aaPredicted RBP18.19■□□□□ 0.5
HOMER3-205ENST00000542541 CYCSP99999 105 aaKnown RBP18.19■□□□□ 0.5
HOMER3-205ENST00000542541 TNFRSF9Q07011 255 aa18.19■□□□□ 0.5
HOMER3-205ENST00000542541 ECSCRQ19T08 205 aa18.19■□□□□ 0.5
HOMER3-205ENST00000542541 TMEM95Q3KNT9 176 aa18.19■□□□□ 0.5
HOMER3-205ENST00000542541 PDLIM3Q53GG5 364 aaPredicted RBP18.19■□□□□ 0.5
HOMER3-205ENST00000542541 ZBTB8BQ8NAP8 495 aaPredicted RBP18.19■□□□□ 0.5
HOMER3-205ENST00000542541 NOL4LQ96MY1 436 aaPredicted RBP18.19■□□□□ 0.5
HOMER3-205ENST00000542541 PLEKHA3Q9HB20 300 aa18.19■□□□□ 0.5
HOMER3-205ENST00000542541 ENY2Q9NPA8 101 aa18.19■□□□□ 0.5
HOMER3-205ENST00000542541 LINC00527Q9UJ94 153 aa18.19■□□□□ 0.5
HOMER3-205ENST00000542541 WSB1Q9Y6I7 421 aa18.19■□□□□ 0.5
HOMER3-205ENST00000542541 PLXNB1O43157 2135 aa18.19■□□□□ 0.5
HOMER3-205ENST00000542541 CLPSL1A2RUU4 121 aa18.18■□□□□ 0.5
HOMER3-205ENST00000542541 FOXL1Q12952 345 aa18.18■□□□□ 0.5
HOMER3-205ENST00000542541 CGB1A6NKQ9 187 aa18.17■□□□□ 0.5
HOMER3-205ENST00000542541 TEX22C9J3V5 150 aa18.17■□□□□ 0.5
HOMER3-205ENST00000542541 MED6O75586 246 aa18.17■□□□□ 0.5
HOMER3-205ENST00000542541 NKX2-1P43699 371 aaPredicted RBP18.17■□□□□ 0.5
HOMER3-205ENST00000542541 SLC35B1P78383 322 aa18.17■□□□□ 0.5
HOMER3-205ENST00000542541 CENPVQ7Z7K6 275 aaPredicted RBP18.17■□□□□ 0.5
HOMER3-205ENST00000542541 OR4D5Q8NGN0 318 aa18.17■□□□□ 0.5
HOMER3-205ENST00000542541 A0A1B0GW64 132 aa18.16■□□□□ 0.5
HOMER3-205ENST00000542541 HMX3A6NHT5 357 aa18.16■□□□□ 0.5
HOMER3-205ENST00000542541 CEBPZOSA8MTT3 80 aa18.16■□□□□ 0.5
HOMER3-205ENST00000542541 G3V318 75 aa18.16■□□□□ 0.5
HOMER3-205ENST00000542541 ID3Q02535 119 aa18.16■□□□□ 0.5
HOMER3-205ENST00000542541 CXorf66Q5JRM2 361 aaPredicted RBP18.16■□□□□ 0.5
HOMER3-205ENST00000542541 RNF114Q9Y508 228 aa18.16■□□□□ 0.5
HOMER3-205ENST00000542541 NXPH3O95157 252 aa18.16■□□□□ 0.5
HOMER3-205ENST00000542541 SIX6O95475 246 aa18.16■□□□□ 0.5
HOMER3-205ENST00000542541 APELAP0DMC3 54 aa18.16■□□□□ 0.5
HOMER3-205ENST00000542541 HOXA1P49639 335 aaPredicted RBP18.16■□□□□ 0.5
HOMER3-205ENST00000542541 ERHP84090 104 aaKnown RBP18.16■□□□□ 0.5
HOMER3-205ENST00000542541 FCN2Q15485 313 aa18.16■□□□□ 0.5
HOMER3-205ENST00000542541 KRTAP24-1Q3LI83 254 aa18.16■□□□□ 0.5
HOMER3-205ENST00000542541 OR10W1Q8NGF6 305 aa18.16■□□□□ 0.5
HOMER3-205ENST00000542541 TMEM158Q8WZ71 300 aa18.16■□□□□ 0.5
HOMER3-205ENST00000542541 WNT10AQ9GZT5 417 aa18.16■□□□□ 0.5
HOMER3-205ENST00000542541 IGLC7A0M8Q6 106 aa18.15■□□□□ 0.5
HOMER3-205ENST00000542541 INS-IGF2F8WCM5 200 aa18.15■□□□□ 0.5
HOMER3-205ENST00000542541 OR13C7P0DN81 318 aa18.15■□□□□ 0.5
HOMER3-205ENST00000542541 MDKP21741 143 aaPredicted RBP18.15■□□□□ 0.5
HOMER3-205ENST00000542541 H2BFSP57053 126 aa18.15■□□□□ 0.5
HOMER3-205ENST00000542541 TTC9CQ8N5M4 171 aa18.15■□□□□ 0.5
HOMER3-205ENST00000542541 NMES1Q9C002 83 aa18.15■□□□□ 0.5
HOMER3-205ENST00000542541 HIPK2Q9H2X6 1198 aa18.15■□□□□ 0.5
HOMER3-205ENST00000542541 ZFP57Q9NU63 452 aa18.15■□□□□ 0.5
HOMER3-205ENST00000542541 TMEM89A2RUT3 159 aa18.14■□□□□ 0.49
HOMER3-205ENST00000542541 PSMB11A5LHX3 300 aa18.14■□□□□ 0.49
HOMER3-205ENST00000542541 WRBO00258 174 aa18.14■□□□□ 0.49
HOMER3-205ENST00000542541 LY86O95711 162 aa18.14■□□□□ 0.49
HOMER3-205ENST00000542541 C19orf54Q5BKX5 351 aa18.14■□□□□ 0.49
HOMER3-205ENST00000542541 SPINK9Q5DT21 86 aa18.14■□□□□ 0.49
HOMER3-205ENST00000542541 ASPHD1Q5U4P2 390 aa18.14■□□□□ 0.49
HOMER3-205ENST00000542541 RBKSQ9H477 322 aa18.14■□□□□ 0.49
HOMER3-205ENST00000542541 HEYLQ9NQ87 328 aaPredicted RBP18.14■□□□□ 0.49
HOMER3-205ENST00000542541 NPIPB5A8MRT5 1133 aa18.13■□□□□ 0.49
HOMER3-205ENST00000542541 SYNGR2O43760 224 aa18.13■□□□□ 0.49
HOMER3-205ENST00000542541 SCGB1D2O95969 90 aa18.13■□□□□ 0.49
HOMER3-205ENST00000542541 AREGP15514 252 aa18.13■□□□□ 0.49
HOMER3-205ENST00000542541 CXCL3P19876 107 aa18.13■□□□□ 0.49
HOMER3-205ENST00000542541 PSMB6P28072 239 aa18.13■□□□□ 0.49
HOMER3-205ENST00000542541 PPIFP30405 207 aaKnown RBP18.13■□□□□ 0.49
HOMER3-205ENST00000542541 WT1-ASQ06250 92 aa18.13■□□□□ 0.49
HOMER3-205ENST00000542541 OR5T1Q8NG75 326 aa18.13■□□□□ 0.49
HOMER3-205ENST00000542541 OR11H7Q8NGC8 314 aa18.13■□□□□ 0.49
HOMER3-205ENST00000542541 FAM110DQ8TAY7 271 aaPredicted RBP18.13■□□□□ 0.49
HOMER3-205ENST00000542541 ATRQ13535 2644 aa18.13■□□□□ 0.49
HOMER3-205ENST00000542541 SNCAP37840 140 aa18.12■□□□□ 0.49
HOMER3-205ENST00000542541 RIPPLY3P57055 190 aa18.12■□□□□ 0.49
HOMER3-205ENST00000542541 IL15RAQ13261 267 aa18.12■□□□□ 0.49
HOMER3-205ENST00000542541 COMMD1Q8N668 190 aa18.12■□□□□ 0.49
HOMER3-205ENST00000542541 DTD1Q8TEA8 209 aa18.12■□□□□ 0.49
HOMER3-205ENST00000542541 CIB3Q96Q77 187 aaPredicted RBP18.12■□□□□ 0.49
HOMER3-205ENST00000542541 FBN1P35555 2871 aaKnown RBP18.12■□□□□ 0.49
HOMER3-205ENST00000542541 CRYGCP07315 174 aa18.12■□□□□ 0.49
HOMER3-205ENST00000542541 CFHR3Q02985 330 aa18.12■□□□□ 0.49
HOMER3-205ENST00000542541 TEX38Q6PEX7 206 aa18.12■□□□□ 0.49
HOMER3-205ENST00000542541 OR2C3Q8N628 320 aa18.12■□□□□ 0.49
HOMER3-205ENST00000542541 KLHDC1Q8N7A1 406 aa18.12■□□□□ 0.49
HOMER3-205ENST00000542541 ASB13Q8WXK3 278 aa18.12■□□□□ 0.49
HOMER3-205ENST00000542541 MAGT1Q9H0U3 335 aa18.12■□□□□ 0.49
HOMER3-205ENST00000542541 HAX1O00165 279 aa18.11■□□□□ 0.49
HOMER3-205ENST00000542541 CYB5BO43169 146 aa18.11■□□□□ 0.49
HOMER3-205ENST00000542541 IGHG4P01861 327 aa18.11■□□□□ 0.49
HOMER3-205ENST00000542541 MBPP02686 304 aaPredicted RBP18.11■□□□□ 0.49
HOMER3-205ENST00000542541 DEFA4P12838 97 aa18.11■□□□□ 0.49
HOMER3-205ENST00000542541 CTRB1P17538 263 aa18.11■□□□□ 0.49
HOMER3-205ENST00000542541 PROK1P58294 105 aa18.11■□□□□ 0.49
HOMER3-205ENST00000542541 SRSF4Q08170 494 aaKnown RBP18.11■□□□□ 0.49
HOMER3-205ENST00000542541 CTRB2Q6GPI1 263 aa18.11■□□□□ 0.49
HOMER3-205ENST00000542541 ZNF329Q86UD4 541 aa18.11■□□□□ 0.49
HOMER3-205ENST00000542541 C19orf24Q9BVV8 132 aa18.11■□□□□ 0.49
HOMER3-205ENST00000542541 ZNF436Q9C0F3 470 aaPredicted RBP18.11■□□□□ 0.49
HOMER3-205ENST00000542541 FBXO24O75426 580 aa18.1■□□□□ 0.49
HOMER3-205ENST00000542541 REG1AP05451 166 aa18.1■□□□□ 0.49
HOMER3-205ENST00000542541 SUB1P53999 127 aaKnown RBP eCLIP18.1■□□□□ 0.49
HOMER3-205ENST00000542541 POLR2GP62487 172 aaKnown RBP eCLIP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms