RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 HINT2Q9BX68 163 aa12.42□□□□□ -0.42
CCND1-205ENST00000542367 ZC4H2Q9NQZ6 224 aa12.42□□□□□ -0.42
CCND1-205ENST00000542367 NDUFA4L2Q9NRX3 87 aa12.42□□□□□ -0.42
CCND1-205ENST00000542367 THYN1Q9P016 225 aa12.42□□□□□ -0.42
CCND1-205ENST00000542367 EXTL2Q9UBQ6 330 aa12.42□□□□□ -0.42
CCND1-205ENST00000542367 KLK11Q9UBX7 282 aa12.42□□□□□ -0.42
CCND1-205ENST00000542367 KMT2CQ8NEZ4 4911 aaKnown RBP12.42□□□□□ -0.42
CCND1-205ENST00000542367 ZNF785A8K8V0 405 aa12.41□□□□□ -0.42
CCND1-205ENST00000542367 M0QYG6 137 aa12.41□□□□□ -0.42
CCND1-205ENST00000542367 SERPINE2P07093 398 aa12.41□□□□□ -0.42
CCND1-205ENST00000542367 UCP3P55916 312 aa12.41□□□□□ -0.42
CCND1-205ENST00000542367 WT1-ASQ06250 92 aa12.41□□□□□ -0.42
CCND1-205ENST00000542367 THOC7Q6I9Y2 204 aaKnown RBP12.41□□□□□ -0.42
CCND1-205ENST00000542367 HSD17B13Q7Z5P4 300 aaPredicted RBP12.41□□□□□ -0.42
CCND1-205ENST00000542367 SLC38A6Q8IZM9 456 aa12.41□□□□□ -0.42
CCND1-205ENST00000542367 TM2D3Q9BRN9 247 aa12.41□□□□□ -0.42
CCND1-205ENST00000542367 MRPS26Q9BYN8 205 aaKnown RBP12.41□□□□□ -0.42
CCND1-205ENST00000542367 TUBA4BQ9H853 241 aa12.41□□□□□ -0.42
CCND1-205ENST00000542367 OR51B2Q9Y5P1 312 aa12.41□□□□□ -0.42
CCND1-205ENST00000542367 TENM3Q9P273 2699 aa12.4□□□□□ -0.42
CCND1-205ENST00000542367 CBLN1P23435 193 aa12.4□□□□□ -0.42
CCND1-205ENST00000542367 PTBP1P26599 531 aaKnown RBP eCLIP12.4□□□□□ -0.42
CCND1-205ENST00000542367 GPR183P32249 361 aa12.4□□□□□ -0.42
CCND1-205ENST00000542367 ALDH3B2P48448 385 aa12.4□□□□□ -0.42
CCND1-205ENST00000542367 SLC25A24Q6NUK1 477 aa12.4□□□□□ -0.42
CCND1-205ENST00000542367 GPR141Q7Z602 305 aa12.4□□□□□ -0.42
CCND1-205ENST00000542367 GDPD1Q8N9F7 314 aa12.4□□□□□ -0.42
CCND1-205ENST00000542367 OR52I2Q8NH67 350 aa12.4□□□□□ -0.42
CCND1-205ENST00000542367 ZNF502Q8TBZ5 544 aa12.4□□□□□ -0.42
CCND1-205ENST00000542367 CACNG8Q8WXS5 425 aa12.4□□□□□ -0.42
CCND1-205ENST00000542367 ABHD1Q96SE0 405 aa12.4□□□□□ -0.42
CCND1-205ENST00000542367 FAM212BQ9NTI7 297 aaPredicted RBP12.4□□□□□ -0.42
CCND1-205ENST00000542367 TECRQ9NZ01 308 aaKnown RBP12.4□□□□□ -0.42
CCND1-205ENST00000542367 PRNDQ9UKY0 176 aa12.4□□□□□ -0.42
CCND1-205ENST00000542367 DBX1A6NMT0 343 aa12.39□□□□□ -0.43
CCND1-205ENST00000542367 CYB5BO43169 146 aa12.39□□□□□ -0.43
CCND1-205ENST00000542367 IFNA6P05013 189 aa12.39□□□□□ -0.43
CCND1-205ENST00000542367 CD81P60033 236 aa12.39□□□□□ -0.43
CCND1-205ENST00000542367 VN1R17PQ8TDU5 208 aa12.39□□□□□ -0.43
CCND1-205ENST00000542367 LSM10Q969L4 123 aaKnown RBP12.39□□□□□ -0.43
CCND1-205ENST00000542367 FKBP11Q9NYL4 201 aa12.39□□□□□ -0.43
CCND1-205ENST00000542367 SELENOKQ9Y6D0 94 aa12.39□□□□□ -0.43
CCND1-205ENST00000542367 IGHV3-35A0A0C4DH35 117 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 TMEM213A2RRL7 107 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 C3orf84H3BNL1 204 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 IGKV1-39P01597 117 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 CD3DP04234 171 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 IGKV1D-39P04432 117 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 MFAP2P55001 183 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 GUCA2BQ16661 112 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 HAGHQ16775 308 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 TM4SF20Q53R12 229 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 RNASE10Q5GAN6 216 aaKnown RBP12.38□□□□□ -0.43
CCND1-205ENST00000542367 PLET1Q6UQ28 207 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 LAX1Q8IWV1 398 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 UXS1Q8NBZ7 420 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 SEC22AQ96IW7 307 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 TMEM56Q96MV1 263 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 TSC22D3Q99576 134 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 NEURL2Q9BR09 285 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 PLEKHA3Q9HB20 300 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 TMEM14BQ9NUH8 114 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 SLC2A8Q9NY64 477 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 MTFP1Q9UDX5 166 aa12.38□□□□□ -0.43
CCND1-205ENST00000542367 F11RQ9Y624 299 aaKnown RBP12.38□□□□□ -0.43
CCND1-205ENST00000542367 IGHV3-21A0A0B4J1V1 117 aa12.37□□□□□ -0.43
CCND1-205ENST00000542367 C15orf61A6NNL5 157 aa12.37□□□□□ -0.43
CCND1-205ENST00000542367 A8MWP6 167 aa12.37□□□□□ -0.43
CCND1-205ENST00000542367 TPPPO94811 219 aa12.37□□□□□ -0.43
CCND1-205ENST00000542367 CD7P09564 240 aa12.37□□□□□ -0.43
CCND1-205ENST00000542367 PGAM2P15259 253 aa12.37□□□□□ -0.43
CCND1-205ENST00000542367 PI3P19957 117 aa12.37□□□□□ -0.43
CCND1-205ENST00000542367 SPCS2Q15005 226 aa12.37□□□□□ -0.43
CCND1-205ENST00000542367 UNQ9165/PRO28630Q6UXU0 137 aa12.37□□□□□ -0.43
CCND1-205ENST00000542367 H2BFWTQ7Z2G1 175 aa12.37□□□□□ -0.43
CCND1-205ENST00000542367 LHFPL1Q86WI0 220 aa12.37□□□□□ -0.43
CCND1-205ENST00000542367 OR5B3Q8NH48 314 aa12.37□□□□□ -0.43
CCND1-205ENST00000542367 C15orf40Q8WUR7 153 aa12.37□□□□□ -0.43
CCND1-205ENST00000542367 WDR89Q96FK6 387 aaPredicted RBP12.37□□□□□ -0.43
CCND1-205ENST00000542367 MIXL1Q9H2W2 232 aa12.37□□□□□ -0.43
CCND1-205ENST00000542367 OR2T8A6NH00 312 aa12.36□□□□□ -0.43
CCND1-205ENST00000542367 CTDSP2O14595 271 aa12.36□□□□□ -0.43
CCND1-205ENST00000542367 RGS5O15539 181 aa12.36□□□□□ -0.43
CCND1-205ENST00000542367 TGOLN2O43493 480 aa12.36□□□□□ -0.43
CCND1-205ENST00000542367 ZNF57Q68EA5 555 aaPredicted RBP12.36□□□□□ -0.43
CCND1-205ENST00000542367 ARRDC1Q8N5I2 433 aa12.36□□□□□ -0.43
CCND1-205ENST00000542367 DEFB125Q8N687 156 aa12.36□□□□□ -0.43
CCND1-205ENST00000542367 OR4D10Q8NGI6 311 aa12.36□□□□□ -0.43
CCND1-205ENST00000542367 OR4A16Q8NH70 328 aa12.36□□□□□ -0.43
CCND1-205ENST00000542367 MUC7Q8TAX7 377 aa12.36□□□□□ -0.43
CCND1-205ENST00000542367 SCARB1Q8WTV0 552 aa12.36□□□□□ -0.43
CCND1-205ENST00000542367 MRGPRFQ96AM1 343 aa12.36□□□□□ -0.43
CCND1-205ENST00000542367 PALMDQ9NP74 551 aa12.36□□□□□ -0.43
CCND1-205ENST00000542367 MLXQ9UH92 298 aa12.36□□□□□ -0.43
CCND1-205ENST00000542367 STAB2Q8WWQ8 2551 aa12.35□□□□□ -0.43
CCND1-205ENST00000542367 TBPP20226 339 aa12.35□□□□□ -0.43
CCND1-205ENST00000542367 PIGPP57054 158 aa12.35□□□□□ -0.43
CCND1-205ENST00000542367 RND3P61587 244 aa12.35□□□□□ -0.43
CCND1-205ENST00000542367 CLVS1Q8IUQ0 354 aaPredicted RBP12.35□□□□□ -0.43
CCND1-205ENST00000542367 TMEM61Q8N0U2 210 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms