RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 C11orf94C9JXX5 98 aa9.03□□□□□ -0.96
SNHG1-216ENST00000541416 CASQ2O14958 399 aaPredicted RBP9.03□□□□□ -0.96
SNHG1-216ENST00000541416 MRPS14O60783 128 aaKnown RBP9.03□□□□□ -0.96
SNHG1-216ENST00000541416 HPRT1P00492 218 aa9.03□□□□□ -0.96
SNHG1-216ENST00000541416 CTSDP07339 412 aaPredicted RBP9.03□□□□□ -0.96
SNHG1-216ENST00000541416 FCGR2BP31994 310 aaPredicted RBP9.03□□□□□ -0.96
SNHG1-216ENST00000541416 OR10A3P58181 314 aa9.03□□□□□ -0.96
SNHG1-216ENST00000541416 NANOS2P60321 138 aaKnown RBP9.03□□□□□ -0.96
SNHG1-216ENST00000541416 PAFAH1B2P68402 229 aa9.03□□□□□ -0.96
SNHG1-216ENST00000541416 RELQ04864 619 aaPredicted RBP9.03□□□□□ -0.96
SNHG1-216ENST00000541416 EIF4EBP1Q13541 118 aaPredicted RBP9.03□□□□□ -0.96
SNHG1-216ENST00000541416 SLC25A24Q6NUK1 477 aa9.03□□□□□ -0.96
SNHG1-216ENST00000541416 NR2C2APQ86WQ0 139 aa9.03□□□□□ -0.96
SNHG1-216ENST00000541416 SECTM1Q8WVN6 248 aa9.03□□□□□ -0.96
SNHG1-216ENST00000541416 C21orf62Q9NYP8 219 aa9.03□□□□□ -0.96
SNHG1-216ENST00000541416 UPK2O00526 184 aa9.02□□□□□ -0.97
SNHG1-216ENST00000541416 TNFSF12O43508 249 aa9.02□□□□□ -0.97
SNHG1-216ENST00000541416 CD5P06127 495 aa9.02□□□□□ -0.97
SNHG1-216ENST00000541416 SERPINE2P07093 398 aa9.02□□□□□ -0.97
SNHG1-216ENST00000541416 TRAPPC2P0DI81 140 aa9.02□□□□□ -0.97
SNHG1-216ENST00000541416 TRAPPC2BP0DI82 140 aa9.02□□□□□ -0.97
SNHG1-216ENST00000541416 BRWD1-AS2P59051 145 aa9.02□□□□□ -0.97
SNHG1-216ENST00000541416 ERVK-16P61578 105 aa9.02□□□□□ -0.97
SNHG1-216ENST00000541416 POU2AF1Q16633 256 aa9.02□□□□□ -0.97
SNHG1-216ENST00000541416 APRG1Q8IVJ8 170 aa9.02□□□□□ -0.97
SNHG1-216ENST00000541416 UBAC2Q8NBM4 344 aa9.02□□□□□ -0.97
SNHG1-216ENST00000541416 BORCS5Q969J3 196 aa9.02□□□□□ -0.97
SNHG1-216ENST00000541416 DUSP21Q9H596 190 aa9.02□□□□□ -0.97
SNHG1-216ENST00000541416 TMEM235A6NFC5 223 aa9.01□□□□□ -0.97
SNHG1-216ENST00000541416 CGB1A6NKQ9 187 aa9.01□□□□□ -0.97
SNHG1-216ENST00000541416 IGLL5B9A064 214 aa9.01□□□□□ -0.97
SNHG1-216ENST00000541416 SULT1C2O00338 296 aa9.01□□□□□ -0.97
SNHG1-216ENST00000541416 NUPL2O15504 423 aaKnown RBP9.01□□□□□ -0.97
SNHG1-216ENST00000541416 EIF4EP06730 217 aaKnown RBP9.01□□□□□ -0.97
SNHG1-216ENST00000541416 OR13C7P0DN81 318 aa9.01□□□□□ -0.97
SNHG1-216ENST00000541416 MFAP2P55001 183 aa9.01□□□□□ -0.97
SNHG1-216ENST00000541416 TMEM187Q14656 261 aa9.01□□□□□ -0.97
SNHG1-216ENST00000541416 Q56UQ5 140 aa9.01□□□□□ -0.97
SNHG1-216ENST00000541416 PRSS48Q7RTY5 328 aa9.01□□□□□ -0.97
SNHG1-216ENST00000541416 OR1L8Q8NGR8 309 aa9.01□□□□□ -0.97
SNHG1-216ENST00000541416 OR13F1Q8NGS4 319 aa9.01□□□□□ -0.97
SNHG1-216ENST00000541416 NUDCD2Q8WVJ2 157 aa9.01□□□□□ -0.97
SNHG1-216ENST00000541416 PLEKHA2Q9HB19 425 aa9.01□□□□□ -0.97
SNHG1-216ENST00000541416 TMEM140Q9NV12 185 aa9.01□□□□□ -0.97
SNHG1-216ENST00000541416 SMPXQ9UHP9 88 aa9.01□□□□□ -0.97
SNHG1-216ENST00000541416 ELF5Q9UKW6 265 aaPredicted RBP9.01□□□□□ -0.97
SNHG1-216ENST00000541416 S1PR2O95136 353 aa9□□□□□ -0.97
SNHG1-216ENST00000541416 CA1P00915 261 aaPredicted RBP9□□□□□ -0.97
SNHG1-216ENST00000541416 FCGR2CP31995 323 aa9□□□□□ -0.97
SNHG1-216ENST00000541416 ZNF367Q7RTV3 350 aa9□□□□□ -0.97
SNHG1-216ENST00000541416 TMEM116Q8NCL8 245 aa9□□□□□ -0.97
SNHG1-216ENST00000541416 OR10W1Q8NGF6 305 aa9□□□□□ -0.97
SNHG1-216ENST00000541416 LSM10Q969L4 123 aaKnown RBP9□□□□□ -0.97
SNHG1-216ENST00000541416 GPHA2Q96T91 129 aa9□□□□□ -0.97
SNHG1-216ENST00000541416 RHPN1-AS1Q9BWJ2 59 aa9□□□□□ -0.97
SNHG1-216ENST00000541416 SLC5A7Q9GZV3 580 aa9□□□□□ -0.97
SNHG1-216ENST00000541416 CCL28Q9NRJ3 127 aa9□□□□□ -0.97
SNHG1-216ENST00000541416 COMMD9Q9P000 198 aa9□□□□□ -0.97
SNHG1-216ENST00000541416 F11RQ9Y624 299 aaKnown RBP9□□□□□ -0.97
SNHG1-216ENST00000541416 IGHV7-4-1A0A0J9YVY3 117 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 ZNF207O43670 478 aaKnown RBP8.99□□□□□ -0.97
SNHG1-216ENST00000541416 SNAPC5O75971 98 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 YIF1AO95070 293 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 PPYP01298 95 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 TFPI2P48307 235 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 PRR20EP86478 221 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 PRR20CP86479 221 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 PRR20DP86480 221 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 PRR20BP86481 221 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 PRR20AP86496 221 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 GVQW1Q8N7I0 195 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 BEST4Q8NFU0 473 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 SCARB1Q8WTV0 552 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 TMEM56Q96MV1 263 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 RNF2Q99496 336 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 GINS3Q9BRX5 216 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 CHRDL1Q9BU40 450 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 HINT2Q9BX68 163 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 HRH4Q9H3N8 390 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 ETV7Q9Y603 341 aa8.99□□□□□ -0.97
SNHG1-216ENST00000541416 PKHD1P08F94 4074 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 IGKV3-7A0A075B6H7 116 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 IGHV3OR16-8A0A075B7F1 116 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 TRAV14DV4A0A0A6YYC5 116 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 TRAV3A0A0B4J244 114 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 TEX50A0A1B0GTY4 177 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 TRDV1A0A1B0GX56 115 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 NOTOA8MTQ0 251 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 CHEK1O14757 476 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 XRCC3O43542 346 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 DFFBO76075 338 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 MED14OSP0DP75 135 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 WT1-ASQ06250 92 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 TBCEQ15813 527 aaPredicted RBP8.98□□□□□ -0.97
SNHG1-216ENST00000541416 TMEM41BQ5BJD5 291 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 AADACL3Q5VUY0 350 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 TSPAN14Q8NG11 270 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 OR51H1Q8NH63 302 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 NDUFB11Q9NX14 153 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 FKBP11Q9NYL4 201 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms