RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 THOC7Q6I9Y2 204 aaKnown RBP7.37□□□□□ -1.23
DDX55-208ENST00000541259 ZNF562Q6V9R5 426 aa7.37□□□□□ -1.23
DDX55-208ENST00000541259 ZNF429Q86V71 674 aa7.37□□□□□ -1.23
DDX55-208ENST00000541259 FOXRED2Q8IWF2 684 aa7.37□□□□□ -1.23
DDX55-208ENST00000541259 OR10W1Q8NGF6 305 aa7.37□□□□□ -1.23
DDX55-208ENST00000541259 FYTTD1Q96QD9 318 aaKnown RBP7.37□□□□□ -1.23
DDX55-208ENST00000541259 SPIN2AQ99865 258 aa7.37□□□□□ -1.23
DDX55-208ENST00000541259 SPIN2BQ9BPZ2 258 aa7.37□□□□□ -1.23
DDX55-208ENST00000541259 PDCD10Q9BUL8 212 aa7.37□□□□□ -1.23
DDX55-208ENST00000541259 HINT2Q9BX68 163 aa7.37□□□□□ -1.23
DDX55-208ENST00000541259 ZNF436Q9C0F3 470 aaPredicted RBP7.37□□□□□ -1.23
DDX55-208ENST00000541259 MAGT1Q9H0U3 335 aa7.37□□□□□ -1.23
DDX55-208ENST00000541259 ZNF702PQ9H963 129 aa7.37□□□□□ -1.23
DDX55-208ENST00000541259 COA4Q9NYJ1 87 aa7.37□□□□□ -1.23
DDX55-208ENST00000541259 LINC00527Q9UJ94 153 aa7.37□□□□□ -1.23
DDX55-208ENST00000541259 PIGBOS1A0A0B4J2F0 54 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 MSGN1A6NI15 193 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 TRIM77I1YAP6 450 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 SCGB1D2O95969 90 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 IFNA17P01571 189 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 IGHG2P01859 326 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 MBPP02686 304 aaPredicted RBP7.36□□□□□ -1.23
DDX55-208ENST00000541259 MAS1LP35410 378 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 RPL27AP46776 148 aaKnown RBP7.36□□□□□ -1.23
DDX55-208ENST00000541259 SRSF4Q08170 494 aaKnown RBP7.36□□□□□ -1.23
DDX55-208ENST00000541259 RAB32Q13637 225 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 Q6ZSV7 163 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 OR1L8Q8NGR8 309 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 GRPEL2Q8TAA5 225 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 SRSF12Q8WXF0 261 aaKnown RBP7.36□□□□□ -1.23
DDX55-208ENST00000541259 ARPC1AQ92747 370 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 JMJD8Q96S16 334 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 NMES1Q9C002 83 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 PRSS22Q9GZN4 317 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 COMMD5Q9GZQ3 224 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 RBKSQ9H477 322 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 PARP11Q9NR21 331 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 NDUFA4L2Q9NRX3 87 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 HSPB7Q9UBY9 170 aa7.36□□□□□ -1.23
DDX55-208ENST00000541259 TEX22C9J3V5 150 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 G3V318 75 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 ATP6V0E1O15342 81 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 ACTL6BO94805 426 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 FGF2P09038 288 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 H2AFB1P0C5Y9 115 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 TRAPPC2P0DI81 140 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 TRAPPC2BP0DI82 140 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 AREGP15514 252 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 NKX2-1P43699 371 aaPredicted RBP7.35□□□□□ -1.23
DDX55-208ENST00000541259 SPCS3P61009 180 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 POLR2GP62487 172 aaKnown RBP eCLIP7.35□□□□□ -1.23
DDX55-208ENST00000541259 PRCDQ00LT1 54 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 CD83Q01151 205 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 TNFRSF9Q07011 255 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 LRRC37A5PQ49AS3 106 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 Q5BKY6 102 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 ASPHD1Q5U4P2 390 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 C19orf35Q6ZS72 473 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 SLC35E3Q7Z769 313 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 OR5B3Q8NH48 314 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 OR52E5Q8NH55 327 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 ABHD5Q8WTS1 349 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 NOL4LQ96MY1 436 aaPredicted RBP7.35□□□□□ -1.23
DDX55-208ENST00000541259 NPFFR1Q9GZQ6 430 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 FKBP11Q9NYL4 201 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 ZNF257Q9Y2Q1 563 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 LSM5Q9Y4Y9 91 aaKnown RBP7.35□□□□□ -1.23
DDX55-208ENST00000541259 WSB1Q9Y6I7 421 aa7.35□□□□□ -1.23
DDX55-208ENST00000541259 IGLC7A0M8Q6 106 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 CEBPZOSA8MTT3 80 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 H0YIZ8 118 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 SMLR1H3BR10 107 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 K7EPK0 472 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 SYNGR2O43760 224 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 REG1AP05451 166 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 CRYBA1P05813 215 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 IAPPP10997 89 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 VDAC2P45880 294 aaPredicted RBP7.34□□□□□ -1.23
DDX55-208ENST00000541259 S100A10P60903 97 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 WT1-ASQ06250 92 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 CD300CQ08708 224 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 ECSCRQ19T08 205 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 PDLIM3Q53GG5 364 aaPredicted RBP7.34□□□□□ -1.23
DDX55-208ENST00000541259 PRIMA1Q86XR5 153 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 Q8N2B8 174 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 LFNGQ8NES3 379 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 SGMS2Q8NHU3 365 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 PPP1R1CQ8WVI7 109 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 ST6GAL2Q96JF0 529 aa7.34□□□□□ -1.23
DDX55-208ENST00000541259 RANGRFQ9HD47 186 aaPredicted RBP7.34□□□□□ -1.23
DDX55-208ENST00000541259 RCL1Q9Y2P8 373 aaKnown RBP7.34□□□□□ -1.23
DDX55-208ENST00000541259 TRAV14DV4A0A0A6YYC5 116 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 FAM90A26D6RGX4 464 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 G3V3Q6 166 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 WRBO00258 174 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 SSSCA1O60232 199 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 CCNKO75909 580 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 TSPAN9O75954 239 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 TMEM50AO95807 157 aa7.33□□□□□ -1.24
DDX55-208ENST00000541259 IGF1P05019 195 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms