RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 IGKV1D-17A0A075B6S4 117 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 PSG5Q15238 335 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 CENPWQ5EE01 88 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 MORN5Q5VZ52 161 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 DEFB108BQ8NET1 73 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 BTF3L4Q96K17 158 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 SGK494Q96LW2 274 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 TMEM68Q96MH6 324 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 CA2P00918 260 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 CECR9P0C854 216 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 TDGF1P13385 188 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 CD46P15529 392 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 PRDX2P32119 198 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 LBHQ53QV2 105 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 IGKV1OR2-108A0A075B7D4 117 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 SPINT2O43291 252 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 CXorf1O96002 111 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 MGST1P10620 155 aaKnown RBP8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 GABRA6Q16445 453 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 MORN2Q502X0 79 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 LCN12Q6JVE5 192 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 FAM168AQ92567 244 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 EAF1Q96JC9 268 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 SPRY4Q9C004 299 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 SERTAD4Q9NUC0 356 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 NAT8BQ9UHF3 227 aa8.53□□□□□ -1.04
CDC42SE1-207ENST00000540998 TRAV5A0A0B4J249 113 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 PIGBOS1A0A0B4J2F0 54 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 OPRK1P41145 380 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 MRPL49Q13405 166 aaKnown RBP8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 MMDQ15546 238 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 ZBTB34Q8NCN2 500 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 MDS2Q8NDY4 140 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 VAMP8Q9BV40 100 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 IFI27L2Q9H2X8 130 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 IL36BQ9NZH7 164 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 ABI3Q9P2A4 366 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 NTF3P20783 257 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 LGALS4P56470 323 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 TPPP2P59282 170 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 YPEL3P61236 119 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 OR5AU1Q8NGC0 362 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 RND1Q92730 232 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 LPAR2Q9HBW0 351 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 DCAF16Q9NXF7 216 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 TBL2Q9Y4P3 447 aaKnown RBP8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 V9GYV3 84 aa8.52□□□□□ -1.05
CDC42SE1-207ENST00000540998 OR7C2O60412 319 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 MMP23AO75900 390 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 CD24P25063 80 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 ERASQ7Z444 233 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 S1PR3Q99500 378 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 RIF1Q5UIP0 2472 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 ANKRD11Q6UB99 2663 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 LNP1A1A4G5 178 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 IGKV1-16P04430 117 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 RPLP1P05386 114 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 WT1P19544 449 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 BRS3P32247 399 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 AMTP48728 403 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 WDR31Q8NA23 367 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 OR10W1Q8NGF6 305 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 OR9G1Q8NH87 305 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 ZNF503Q96F45 646 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 OPN3Q9H1Y3 402 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 CXXC4Q9H2H0 198 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 SAA2-SAA4A0A096LPE2 208 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 GGTLC3B5MD39 225 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 KLRC4-KLRK1H3BQV0 150 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 PLAUP00749 431 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 SAA2P0DJI9 122 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 CD99P14209 185 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 NPY1RP25929 384 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 SRIP30626 198 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 LOXL3P58215 753 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 ERVK-16P61578 105 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 SUMO1P63165 101 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 SSBP2P81877 361 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 HTD2P86397 168 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 SMIM21Q3B7S5 101 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 DMRTA1Q5VZB9 504 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 OR4A47Q6IF82 309 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 TEX43Q6ZNM6 134 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 MOGAT3Q86VF5 341 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 LYG1Q8N1E2 194 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 Q8N976 141 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 C9orf106Q8NAJ2 232 aa8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 LSM4Q9Y4Z0 139 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-207ENST00000540998 A0A1W2PN81 502 aa8.5□□□□□ -1.05
CDC42SE1-207ENST00000540998 SPRY3O43610 288 aa8.5□□□□□ -1.05
CDC42SE1-207ENST00000540998 TNFSF15O95150 251 aa8.5□□□□□ -1.05
CDC42SE1-207ENST00000540998 ACP1P24666 158 aa8.5□□□□□ -1.05
CDC42SE1-207ENST00000540998 CT45A1Q5HYN5 189 aa8.5□□□□□ -1.05
CDC42SE1-207ENST00000540998 SLC24A4Q8NFF2 622 aa8.5□□□□□ -1.05
CDC42SE1-207ENST00000540998 CT45A3Q8NHU0 189 aa8.5□□□□□ -1.05
CDC42SE1-207ENST00000540998 RAB1CQ92928 201 aa8.5□□□□□ -1.05
CDC42SE1-207ENST00000540998 KLF13Q9Y2Y9 288 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE1-207ENST00000540998 GOLT1BQ9Y3E0 138 aa8.5□□□□□ -1.05
CDC42SE1-207ENST00000540998 NBASA2RRP1 2371 aa8.5□□□□□ -1.05
CDC42SE1-207ENST00000540998 DLEU1O43261 78 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms