RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 DPPA3Q6W0C5 159 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 OR11H6Q8NGC7 330 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 OR4P4Q8NGL7 312 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 LHX4Q969G2 390 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 HIPK2Q9H2X6 1198 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 HEYLQ9NQ87 328 aaPredicted RBP10.05□□□□□ -0.8
SMAD3-204ENST00000540846 OR51B2Q9Y5P1 312 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 TNCP24821 2201 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 UBE2L5PA0A1B0GUS4 154 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 ODF3BA8MYP8 253 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 BUB1B-PAK6H3BSN5 160 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 KBTBD11O94819 623 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 TOX4O94842 621 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 GATA3P23771 443 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 COX7A1P24310 79 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 FHITP49789 147 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 PRCDQ00LT1 54 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 ZNF616Q08AN1 781 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 SPNS3Q6ZMD2 512 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 THNSL2Q86YJ6 484 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 CCDC28AQ8IWP9 274 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 COMMD1Q8N668 190 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 BPIFCQ8NFQ6 507 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 OR4A5Q8NH83 315 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 VSTM2AQ8TAG5 236 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 FAM213BQ8TBF2 198 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 TAF15Q92804 592 aaKnown RBP eCLIP10.04□□□□□ -0.8
SMAD3-204ENST00000540846 RBMXL1Q96E39 390 aaKnown RBP10.04□□□□□ -0.8
SMAD3-204ENST00000540846 UQCC1Q9NVA1 299 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 FKBP11Q9NYL4 201 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 TIMM9Q9Y5J7 89 aa10.04□□□□□ -0.8
SMAD3-204ENST00000540846 MXRA5Q9NR99 2828 aa10.03□□□□□ -0.8
SMAD3-204ENST00000540846 LY6LH3BQJ8 138 aa10.03□□□□□ -0.8
SMAD3-204ENST00000540846 TGFAP01135 160 aa10.03□□□□□ -0.8
SMAD3-204ENST00000540846 IGLV2-23P01705 113 aa10.03□□□□□ -0.8
SMAD3-204ENST00000540846 PNKDQ8N490 385 aa10.03□□□□□ -0.8
SMAD3-204ENST00000540846 OR5B3Q8NH48 314 aa10.03□□□□□ -0.8
SMAD3-204ENST00000540846 TMEM167AQ8TBQ9 72 aa10.03□□□□□ -0.8
SMAD3-204ENST00000540846 TMEM170AQ8WVE7 144 aa10.03□□□□□ -0.8
SMAD3-204ENST00000540846 RSG1Q9BU20 258 aa10.03□□□□□ -0.8
SMAD3-204ENST00000540846 MS4A7Q9GZW8 240 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-204ENST00000540846 IGHV1-3A0A0C4DH29 117 aa10.02□□□□□ -0.81
SMAD3-204ENST00000540846 PRSS46E5RG02 174 aa10.02□□□□□ -0.81
SMAD3-204ENST00000540846 SMAD7O15105 426 aaKnown RBP10.02□□□□□ -0.81
SMAD3-204ENST00000540846 TSPAN15O95858 294 aa10.02□□□□□ -0.81
SMAD3-204ENST00000540846 IFNA10P01566 189 aa10.02□□□□□ -0.81
SMAD3-204ENST00000540846 MDKP21741 143 aaPredicted RBP10.02□□□□□ -0.81
SMAD3-204ENST00000540846 SERF2P84101 59 aa10.02□□□□□ -0.81
SMAD3-204ENST00000540846 AKR1C8PQ5T2L2 129 aa10.02□□□□□ -0.81
SMAD3-204ENST00000540846 CYB5R2Q6BCY4 276 aa10.02□□□□□ -0.81
SMAD3-204ENST00000540846 CENPVQ7Z7K6 275 aaPredicted RBP10.02□□□□□ -0.81
SMAD3-204ENST00000540846 SLC24A4Q8NFF2 622 aa10.02□□□□□ -0.81
SMAD3-204ENST00000540846 AJUBAQ96IF1 538 aa10.02□□□□□ -0.81
SMAD3-204ENST00000540846 GGACTQ9BVM4 153 aa10.02□□□□□ -0.81
SMAD3-204ENST00000540846 ENY2Q9NPA8 101 aa10.02□□□□□ -0.81
SMAD3-204ENST00000540846 CENPVL3A0A0U1RRI6 287 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 TEX50A0A1B0GTY4 177 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 J3QLI3 93 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 RRHO14718 337 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 FSHBP01225 129 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 MYOD1P15172 320 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 NPY1RP25929 384 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 LGALS7P47929 136 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 RPS16P62249 146 aaKnown RBP10.01□□□□□ -0.81
SMAD3-204ENST00000540846 RPL8P62917 257 aaKnown RBP10.01□□□□□ -0.81
SMAD3-204ENST00000540846 TUSC1Q2TAM9 212 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 VMA21Q3ZAQ7 101 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 KLF17Q5JT82 389 aaPredicted RBP10.01□□□□□ -0.81
SMAD3-204ENST00000540846 ETV3LQ6ZN32 361 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 LFNGQ8NES3 379 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 RPEQ96AT9 228 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 C7orf69Q9H7B7 122 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 PLEKHA3Q9HB20 300 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 FBXO7Q9Y3I1 522 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 A0A1W2PPI3 338 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 TMEM218A2RU14 115 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 INS-IGF2F8WCM5 200 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 CD5P06127 495 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 FGF7P21781 194 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 SNCAP37840 140 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 UBE2E1P51965 193 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 ATP5IP56385 69 aaPredicted RBP10.01□□□□□ -0.81
SMAD3-204ENST00000540846 RAB11AP62491 216 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 DLK1P80370 383 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 SRSF3P84103 164 aaKnown RBP10.01□□□□□ -0.81
SMAD3-204ENST00000540846 BSXQ3C1V8 233 aa10.01□□□□□ -0.81
SMAD3-204ENST00000540846 SONP18583 2426 aaKnown RBP10□□□□□ -0.81
SMAD3-204ENST00000540846 TRAV40A0A0B4J280 105 aa10□□□□□ -0.81
SMAD3-204ENST00000540846 BTBD17A6NE02 478 aa10□□□□□ -0.81
SMAD3-204ENST00000540846 IGHV4-38-2P0DP08 117 aa10□□□□□ -0.81
SMAD3-204ENST00000540846 HTR1DP28221 377 aa10□□□□□ -0.81
SMAD3-204ENST00000540846 TPTE2P1Q5T6R2 138 aa10□□□□□ -0.81
SMAD3-204ENST00000540846 SPSB3Q6PJ21 355 aa10□□□□□ -0.81
SMAD3-204ENST00000540846 PIP4P2Q8N4L2 257 aa10□□□□□ -0.81
SMAD3-204ENST00000540846 OR1L8Q8NGR8 309 aa10□□□□□ -0.81
SMAD3-204ENST00000540846 NARS2Q96I59 477 aaKnown RBP10□□□□□ -0.81
SMAD3-204ENST00000540846 SCRT1Q9BWW7 348 aa10□□□□□ -0.81
SMAD3-204ENST00000540846 COMMD5Q9GZQ3 224 aa10□□□□□ -0.81
SMAD3-204ENST00000540846 NDUFA4L2Q9NRX3 87 aa10□□□□□ -0.81
SMAD3-204ENST00000540846 WDR83OSQ9Y284 106 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms