RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 OR1L6Q8NGR2 347 aa10.54□□□□□ -0.72
SNHG1-213ENST00000540725 CD300LFQ8TDQ1 290 aa10.54□□□□□ -0.72
SNHG1-213ENST00000540725 Q9H521 79 aa10.54□□□□□ -0.72
SNHG1-213ENST00000540725 COMMD9Q9P000 198 aa10.54□□□□□ -0.72
SNHG1-213ENST00000540725 MEIS3P1A6NDR6 274 aa10.53□□□□□ -0.72
SNHG1-213ENST00000540725 CYB5BO43169 146 aa10.53□□□□□ -0.72
SNHG1-213ENST00000540725 TGOLN2O43493 480 aa10.53□□□□□ -0.72
SNHG1-213ENST00000540725 THOC7Q6I9Y2 204 aaKnown RBP10.53□□□□□ -0.72
SNHG1-213ENST00000540725 VN1R17PQ8TDU5 208 aa10.53□□□□□ -0.72
SNHG1-213ENST00000540725 TMEM190Q8WZ59 177 aa10.53□□□□□ -0.72
SNHG1-213ENST00000540725 ZNF436Q9C0F3 470 aaPredicted RBP10.53□□□□□ -0.72
SNHG1-213ENST00000540725 SERPINE2P07093 398 aa10.52□□□□□ -0.72
SNHG1-213ENST00000540725 TRAPPC2P0DI81 140 aa10.52□□□□□ -0.72
SNHG1-213ENST00000540725 TRAPPC2BP0DI82 140 aa10.52□□□□□ -0.72
SNHG1-213ENST00000540725 OR13C7P0DN81 318 aa10.52□□□□□ -0.72
SNHG1-213ENST00000540725 GNRHRP30968 328 aa10.52□□□□□ -0.72
SNHG1-213ENST00000540725 ERVK-16P61578 105 aa10.52□□□□□ -0.72
SNHG1-213ENST00000540725 WT1-ASQ06250 92 aa10.52□□□□□ -0.72
SNHG1-213ENST00000540725 HSD17B13Q7Z5P4 300 aaPredicted RBP10.52□□□□□ -0.72
SNHG1-213ENST00000540725 SLC38A6Q8IZM9 456 aa10.52□□□□□ -0.72
SNHG1-213ENST00000540725 OR2C3Q8N628 320 aa10.52□□□□□ -0.72
SNHG1-213ENST00000540725 OR1L8Q8NGR8 309 aa10.52□□□□□ -0.72
SNHG1-213ENST00000540725 BORCS5Q969J3 196 aa10.52□□□□□ -0.72
SNHG1-213ENST00000540725 SPAG8Q99932 426 aaPredicted RBP10.52□□□□□ -0.72
SNHG1-213ENST00000540725 C5orf66Q9H5L9 145 aa10.52□□□□□ -0.72
SNHG1-213ENST00000540725 IFT46Q9NQC8 304 aa10.52□□□□□ -0.72
SNHG1-213ENST00000540725 EHFQ9NZC4 300 aa10.52□□□□□ -0.72
SNHG1-213ENST00000540725 TEX50A0A1B0GTY4 177 aa10.52□□□□□ -0.73
SNHG1-213ENST00000540725 OR2T8A6NH00 312 aa10.52□□□□□ -0.73
SNHG1-213ENST00000540725 MARCH11A6NNE9 402 aa10.52□□□□□ -0.73
SNHG1-213ENST00000540725 RLN1P04808 185 aa10.52□□□□□ -0.73
SNHG1-213ENST00000540725 NEDD8Q15843 81 aa10.52□□□□□ -0.73
SNHG1-213ENST00000540725 SLC25A24Q6NUK1 477 aa10.52□□□□□ -0.73
SNHG1-213ENST00000540725 BSCL2Q96G97 398 aaPredicted RBP10.52□□□□□ -0.73
SNHG1-213ENST00000540725 DAZ1Q9NQZ3 744 aaKnown RBP10.52□□□□□ -0.73
SNHG1-213ENST00000540725 TSPAN4O14817 238 aa10.51□□□□□ -0.73
SNHG1-213ENST00000540725 XRCC3O43542 346 aa10.51□□□□□ -0.73
SNHG1-213ENST00000540725 TMEM127O75204 238 aa10.51□□□□□ -0.73
SNHG1-213ENST00000540725 F2RP25116 425 aa10.51□□□□□ -0.73
SNHG1-213ENST00000540725 MFAP2P55001 183 aa10.51□□□□□ -0.73
SNHG1-213ENST00000540725 SPSB3Q6PJ21 355 aa10.51□□□□□ -0.73
SNHG1-213ENST00000540725 LSM10Q969L4 123 aaKnown RBP10.51□□□□□ -0.73
SNHG1-213ENST00000540725 MOB3AQ96BX8 217 aa10.51□□□□□ -0.73
SNHG1-213ENST00000540725 ZNF2Q9BSG1 426 aaPredicted RBP10.51□□□□□ -0.73
SNHG1-213ENST00000540725 HINT2Q9BX68 163 aa10.51□□□□□ -0.73
SNHG1-213ENST00000540725 NDUFA4L2Q9NRX3 87 aa10.51□□□□□ -0.73
SNHG1-213ENST00000540725 UBQLN2Q9UHD9 624 aa10.51□□□□□ -0.73
SNHG1-213ENST00000540725 F11RQ9Y624 299 aaKnown RBP10.51□□□□□ -0.73
SNHG1-213ENST00000540725 IGHV3-21A0A0B4J1V1 117 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 CXorf65A6NEN9 183 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 NDUFA4O00483 81 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 PGLYRP1O75594 196 aaPredicted RBP10.5□□□□□ -0.73
SNHG1-213ENST00000540725 LPAR6P43657 344 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 RFX2P48378 723 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 APOC4P55056 127 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 PMS2P11Q13670 270 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 LAMTOR1Q6IAA8 161 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 DHRS11Q6UWP2 260 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 Q6ZWC4 215 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 WFDC3Q8IUB2 231 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 FCAMRQ8WWV6 532 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 LINC00476Q8WZB0 136 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 S100A16Q96FQ6 103 aaKnown RBP10.5□□□□□ -0.73
SNHG1-213ENST00000540725 ATP6V0BQ99437 205 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 CHRDL1Q9BU40 450 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 C21orf62Q9NYP8 219 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 ANAPC10Q9UM13 185 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 TP53TG1Q9Y2A0 90 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 NSG2Q9Y328 171 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 OR51B2Q9Y5P1 312 aa10.5□□□□□ -0.73
SNHG1-213ENST00000540725 A0A0J9YWU9 116 aa10.49□□□□□ -0.73
SNHG1-213ENST00000540725 SPRY2O43597 315 aa10.49□□□□□ -0.73
SNHG1-213ENST00000540725 KRASP01116 189 aa10.49□□□□□ -0.73
SNHG1-213ENST00000540725 PMP2P02689 132 aa10.49□□□□□ -0.73
SNHG1-213ENST00000540725 BMI1P35226 326 aa10.49□□□□□ -0.73
SNHG1-213ENST00000540725 EWSR1Q01844 656 aaKnown RBP eCLIP10.49□□□□□ -0.73
SNHG1-213ENST00000540725 DEFB135Q30KP9 77 aa10.49□□□□□ -0.73
SNHG1-213ENST00000540725 ODF3L2Q3SX64 289 aa10.49□□□□□ -0.73
SNHG1-213ENST00000540725 UBE2NLQ5JXB2 153 aa10.49□□□□□ -0.73
SNHG1-213ENST00000540725 LYG2Q86SG7 212 aa10.49□□□□□ -0.73
SNHG1-213ENST00000540725 OR5H2Q8NGV7 314 aa10.49□□□□□ -0.73
SNHG1-213ENST00000540725 SCARB1Q8WTV0 552 aa10.49□□□□□ -0.73
SNHG1-213ENST00000540725 DGCR14Q96DF8 476 aaKnown RBP10.49□□□□□ -0.73
SNHG1-213ENST00000540725 C20orf24Q9BUV8 137 aa10.49□□□□□ -0.73
SNHG1-213ENST00000540725 FXYD6Q9H0Q3 95 aa10.49□□□□□ -0.73
SNHG1-213ENST00000540725 IGHV3OR16-8A0A075B7F1 116 aa10.48□□□□□ -0.73
SNHG1-213ENST00000540725 F8W735 103 aaPredicted RBP10.48□□□□□ -0.73
SNHG1-213ENST00000540725 K7EIM0 57 aa10.48□□□□□ -0.73
SNHG1-213ENST00000540725 UBE2CO00762 179 aa10.48□□□□□ -0.73
SNHG1-213ENST00000540725 ZNF207O43670 478 aaKnown RBP10.48□□□□□ -0.73
SNHG1-213ENST00000540725 SNAPC5O75971 98 aa10.48□□□□□ -0.73
SNHG1-213ENST00000540725 ADMP35318 185 aa10.48□□□□□ -0.73
SNHG1-213ENST00000540725 G6PCP35575 357 aa10.48□□□□□ -0.73
SNHG1-213ENST00000540725 TGFBR1P36897 503 aa10.48□□□□□ -0.73
SNHG1-213ENST00000540725 TAS2R46P59540 309 aa10.48□□□□□ -0.73
SNHG1-213ENST00000540725 TAS2R20P59543 309 aa10.48□□□□□ -0.73
SNHG1-213ENST00000540725 TNFRSF9Q07011 255 aa10.48□□□□□ -0.73
SNHG1-213ENST00000540725 TMEM69Q5SWH9 247 aa10.48□□□□□ -0.73
SNHG1-213ENST00000540725 CROCCP3Q8IVE0 287 aa10.48□□□□□ -0.73
SNHG1-213ENST00000540725 CMTM1Q8IZ96 169 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms