RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 OR1L6Q8NGR2 347 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 CORO2AQ92828 525 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 ENY2Q9NPA8 101 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 ARL2-SNX15V9GYD0 113 aa10.11□□□□□ -0.79
NPC1-202ENST00000540608 Q0VG73 95 aa10.1□□□□□ -0.79
NPC1-202ENST00000540608 RPEL1Q2QD12 228 aa10.1□□□□□ -0.79
NPC1-202ENST00000540608 CT45A1Q5HYN5 189 aa10.1□□□□□ -0.79
NPC1-202ENST00000540608 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.1□□□□□ -0.79
NPC1-202ENST00000540608 CT45A3Q8NHU0 189 aa10.1□□□□□ -0.79
NPC1-202ENST00000540608 NEUROG1Q92886 237 aa10.1□□□□□ -0.79
NPC1-202ENST00000540608 NCOR1P1Q9H4R4 102 aa10.1□□□□□ -0.79
NPC1-202ENST00000540608 SLC25A10Q9UBX3 287 aaPredicted RBP10.1□□□□□ -0.79
NPC1-202ENST00000540608 PRR33A8MZF0 331 aa10.1□□□□□ -0.79
NPC1-202ENST00000540608 SERF1AO75920 110 aa10.1□□□□□ -0.79
NPC1-202ENST00000540608 CGAP01215 116 aa10.1□□□□□ -0.79
NPC1-202ENST00000540608 LINC00869P0C866 280 aa10.1□□□□□ -0.79
NPC1-202ENST00000540608 C17orf58Q2M2W7 97 aa10.1□□□□□ -0.79
NPC1-202ENST00000540608 KRTCAP3Q53RY4 240 aa10.1□□□□□ -0.79
NPC1-202ENST00000540608 UTF1Q5T230 341 aa10.1□□□□□ -0.79
NPC1-202ENST00000540608 MMD2Q8IY49 270 aa10.1□□□□□ -0.79
NPC1-202ENST00000540608 ATG101Q9BSB4 218 aa10.1□□□□□ -0.79
NPC1-202ENST00000540608 SFXN3Q9BWM7 321 aa10.1□□□□□ -0.79
NPC1-202ENST00000540608 V9GYV3 84 aa10.1□□□□□ -0.79
NPC1-202ENST00000540608 TRBV9A0A0B4J1U6 114 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 FCN1O00602 326 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 IGFBP2P18065 325 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 WT1P19544 449 aaPredicted RBP10.09□□□□□ -0.79
NPC1-202ENST00000540608 MIR17HGQ75NE6 70 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 LEAP2Q969E1 77 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 GNB1LQ9BYB4 327 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 ZNF71Q9NQZ8 489 aaPredicted RBP10.09□□□□□ -0.79
NPC1-202ENST00000540608 HELTA6NFD8 242 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 LHBP01229 141 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 CD33P20138 364 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 IER3P46695 156 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 TPTE2P1Q5T6R2 138 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 TEX43Q6ZNM6 134 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 LRP11Q86VZ4 500 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 FAM169BQ8N8A8 192 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 RAB9BQ9NP90 201 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 TMEM167BQ9NRX6 74 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 IDI2-AS1Q9NZ38 188 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 SLC45A2Q9UMX9 530 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 SAA2-SAA4A0A096LPE2 208 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 TNFSF13O75888 250 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 OR10J4P0C629 311 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 SAA2P0DJI9 122 aaPredicted RBP10.09□□□□□ -0.79
NPC1-202ENST00000540608 COL8A2P25067 703 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 TDGF1P3P51864 188 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 MSMPQ1L6U9 139 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 BAGE3Q86Y29 109 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 BAGE2Q86Y30 109 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 ADTRPQ96IZ2 230 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 C20orf144Q9BQM9 153 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 HSPB9Q9BQS6 159 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 IL19Q9UHD0 177 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 OR51B2Q9Y5P1 312 aa10.09□□□□□ -0.79
NPC1-202ENST00000540608 M0QZK8 103 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 OR5I1Q13606 314 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 POU2AF1Q16633 256 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 SPRNQ5BIV9 151 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 TOMM20LQ6UXN7 152 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 BHLHA15Q7RTS1 189 aaPredicted RBP10.08□□□□□ -0.8
NPC1-202ENST00000540608 MRPL52Q86TS9 123 aaKnown RBP10.08□□□□□ -0.8
NPC1-202ENST00000540608 OR5AU1Q8NGC0 362 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 OR2V2Q96R30 315 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 KBTBD11-OT1A0A1B0GTJ5 212 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 SNURFLB1AK76 121 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 ACTL6BO94805 426 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 FRMD6-AS1P0C7T7 363 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 GNG4P50150 75 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 MRPS11P82912 194 aaKnown RBP10.08□□□□□ -0.8
NPC1-202ENST00000540608 PSG5Q15238 335 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 MOGAT3Q86VF5 341 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 SARAFQ96BY9 339 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 LRFN3Q9BTN0 628 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 DMXL1Q9Y485 3027 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 SLC25A15Q9Y619 301 aa10.08□□□□□ -0.8
NPC1-202ENST00000540608 CRYBB3P26998 211 aa10.07□□□□□ -0.8
NPC1-202ENST00000540608 TDRG1Q3Y452 100 aa10.07□□□□□ -0.8
NPC1-202ENST00000540608 CENPWQ5EE01 88 aa10.07□□□□□ -0.8
NPC1-202ENST00000540608 OR8I2Q8N0Y5 310 aa10.07□□□□□ -0.8
NPC1-202ENST00000540608 STARD4Q96DR4 205 aa10.07□□□□□ -0.8
NPC1-202ENST00000540608 NABP2Q9BQ15 211 aa10.07□□□□□ -0.8
NPC1-202ENST00000540608 MIEN1Q9BRT3 115 aa10.07□□□□□ -0.8
NPC1-202ENST00000540608 PARD6AQ9NPB6 346 aa10.07□□□□□ -0.8
NPC1-202ENST00000540608 TECRQ9NZ01 308 aaKnown RBP10.07□□□□□ -0.8
NPC1-202ENST00000540608 PRNDQ9UKY0 176 aa10.07□□□□□ -0.8
NPC1-202ENST00000540608 PROCRQ9UNN8 238 aa10.07□□□□□ -0.8
NPC1-202ENST00000540608 AHRRA9YTQ3 701 aa10.07□□□□□ -0.8
NPC1-202ENST00000540608 MYOD1P15172 320 aa10.07□□□□□ -0.8
NPC1-202ENST00000540608 RPL19P84098 196 aaKnown RBP10.07□□□□□ -0.8
NPC1-202ENST00000540608 ZNF705AQ6ZN79 300 aaPredicted RBP10.07□□□□□ -0.8
NPC1-202ENST00000540608 HINT2Q9BX68 163 aa10.07□□□□□ -0.8
NPC1-202ENST00000540608 ZNF257Q9Y2Q1 563 aa10.07□□□□□ -0.8
NPC1-202ENST00000540608 J3QR06 171 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 CX3CL1P78423 397 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 WDR73Q6P4I2 378 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 IGFL2Q6UWQ7 119 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 PQLC2Q6ZP29 291 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms