RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 RDH5Q92781 318 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 PTH2Q96A98 100 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 NGBQ9NPG2 151 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 COA3Q9Y2R0 106 aaPredicted RBP7.88□□□□□ -1.15
CLIP1-214ENST00000540539 CEP192Q8TEP8 1941 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 CUL9Q8IWT3 2517 aa7.88□□□□□ -1.15
CLIP1-214ENST00000540539 A0A1W2PRD5 423 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 A0A1W2PRF3 423 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 A0A1W2PRM7 423 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 GAGE12JA6NER3 117 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 H0Y980 276 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 HAX1O00165 279 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 SMAD7O15105 426 aaKnown RBP7.87□□□□□ -1.15
CLIP1-214ENST00000540539 GAGE7O76087 117 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 GAGE12FP0CL80 117 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 GAGE12GP0CL81 117 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 GAGE12IP0CL82 117 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 HLA-DOBP13765 273 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 GAGE4Q13068 117 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 ZNF146Q15072 292 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 RNPS1Q15287 305 aaKnown RBP7.87□□□□□ -1.15
CLIP1-214ENST00000540539 IZUMO4Q1ZYL8 232 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 FAM69BQ5VUD6 431 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 GLMPQ8WWB7 406 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 URB1-AS1Q96HZ7 61 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 PSENENQ9NZ42 101 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 WDFY4Q6ZS81 3184 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 F5H5K5 113 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 PPYP01298 95 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 NTF4P34130 210 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 DAP3P51398 398 aaKnown RBP7.87□□□□□ -1.15
CLIP1-214ENST00000540539 RPL8P62917 257 aaKnown RBP7.87□□□□□ -1.15
CLIP1-214ENST00000540539 KLF5Q13887 457 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-214ENST00000540539 VWC2Q2TAL6 325 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 MOB1BQ7L9L4 216 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 C1orf210Q8IVY1 113 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 ZDHHC23Q8IYP9 409 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 DAZAP1Q96EP5 407 aaKnown RBP7.87□□□□□ -1.15
CLIP1-214ENST00000540539 SAP30LQ9HAJ7 183 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 SIGLEC8Q9NYZ4 499 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 THADAQ6YHU6 1953 aa7.87□□□□□ -1.15
CLIP1-214ENST00000540539 COX5AP20674 150 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 RPS18P62269 152 aaKnown RBP7.86□□□□□ -1.15
CLIP1-214ENST00000540539 SLC38A11Q08AI6 406 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 KISS1Q15726 138 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 Q6AWC8 147 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 OR4A16Q8NH70 328 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 LRRC29Q8WV35 223 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 H1FXQ92522 213 aaKnown RBP7.86□□□□□ -1.15
CLIP1-214ENST00000540539 NXF5Q9H1B4 397 aaKnown RBP7.86□□□□□ -1.15
CLIP1-214ENST00000540539 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-214ENST00000540539 OR1A1Q9P1Q5 309 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 OR1A2Q9Y585 309 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 MPC1Q9Y5U8 109 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 HEBP2Q9Y5Z4 205 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 NCKAP5O14513 1909 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 KMT2EQ8IZD2 1858 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 C10orf142B7Z368 130 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 WIPF1O43516 503 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 CLDN14O95500 239 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 IGHV4-34P06331 123 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 CT62P0C5K7 136 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 SMIM10L1P0DMW3 83 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 KIR2DL2P43627 348 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-214ENST00000540539 ARL4DP49703 201 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 PRDX1Q06830 199 aaKnown RBP7.86□□□□□ -1.15
CLIP1-214ENST00000540539 SSX8Q7RTT4 187 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 SHISA5Q8N114 240 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 ZBTB34Q8NCN2 500 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 GTSF1Q8WW33 167 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 NANOS1Q8WY41 292 aaKnown RBP7.86□□□□□ -1.15
CLIP1-214ENST00000540539 SMIM10Q96HG1 83 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 VPS13AQ96RL7 3174 aa7.86□□□□□ -1.15
CLIP1-214ENST00000540539 IGHV1-24A0A0C4DH33 117 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 PRSS29PA6NIE9 313 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 SYNGR2O43760 224 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 NKX2-2O95096 273 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 ZNF823P16415 610 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 DIAPH2-AS1Q14236 149 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 ADAMTSL4Q6UY14 1074 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 DEFB119Q8N690 84 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.85□□□□□ -1.15
CLIP1-214ENST00000540539 Q8TCH9 128 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 TMEM74BQ9NUR3 256 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 LEPROTL1O95214 131 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 TGFAP01135 160 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 IGHG1P01857 330 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 CD38P28907 300 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 RPL27P61353 136 aaKnown RBP7.85□□□□□ -1.15
CLIP1-214ENST00000540539 FXYD3Q14802 87 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 LINC01559Q495D7 138 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 ZNF766Q5HY98 468 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 SPANXN5Q5MJ07 72 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 TEPPQ6URK8 271 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 Q6ZRM9 215 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 OR2A1Q8NGT9 310 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 ZNF524Q96C55 264 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 DGAT2Q96PD7 388 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 C1QTNF5Q9BXJ0 243 aa7.85□□□□□ -1.15
CLIP1-214ENST00000540539 KCNS2Q9ULS6 477 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms