RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 NDUFA4O00483 81 aa8.91□□□□□ -0.98
CBX3P4-202ENST00000540428 ZNF773Q6PK81 442 aa8.91□□□□□ -0.98
CBX3P4-202ENST00000540428 IZUMO2Q6UXV1 221 aa8.91□□□□□ -0.98
CBX3P4-202ENST00000540428 STPG3Q8N7X2 389 aa8.91□□□□□ -0.98
CBX3P4-202ENST00000540428 GDPD1Q8N9F7 314 aa8.91□□□□□ -0.98
CBX3P4-202ENST00000540428 GIMAP1Q8WWP7 306 aa8.91□□□□□ -0.98
CBX3P4-202ENST00000540428 FCGR1BQ92637 280 aa8.91□□□□□ -0.98
CBX3P4-202ENST00000540428 BORCS5Q969J3 196 aa8.91□□□□□ -0.98
CBX3P4-202ENST00000540428 RNF183Q96D59 192 aa8.91□□□□□ -0.98
CBX3P4-202ENST00000540428 SLC5A7Q9GZV3 580 aa8.91□□□□□ -0.98
CBX3P4-202ENST00000540428 TMEM140Q9NV12 185 aa8.91□□□□□ -0.98
CBX3P4-202ENST00000540428 COMMD9Q9P000 198 aa8.91□□□□□ -0.98
CBX3P4-202ENST00000540428 ETV7Q9Y603 341 aa8.91□□□□□ -0.98
CBX3P4-202ENST00000540428 IGHV3-35A0A0C4DH35 117 aa8.9□□□□□ -0.98
CBX3P4-202ENST00000540428 K7EMT4 169 aa8.9□□□□□ -0.98
CBX3P4-202ENST00000540428 SERPINE2P07093 398 aa8.9□□□□□ -0.98
CBX3P4-202ENST00000540428 TRAPPC2P0DI81 140 aa8.9□□□□□ -0.98
CBX3P4-202ENST00000540428 TRAPPC2BP0DI82 140 aa8.9□□□□□ -0.98
CBX3P4-202ENST00000540428 EWSR1Q01844 656 aaKnown RBP eCLIP8.9□□□□□ -0.98
CBX3P4-202ENST00000540428 DEFB135Q30KP9 77 aa8.9□□□□□ -0.98
CBX3P4-202ENST00000540428 ODF3L2Q3SX64 289 aa8.9□□□□□ -0.98
CBX3P4-202ENST00000540428 CADM3Q8N126 398 aa8.9□□□□□ -0.98
CBX3P4-202ENST00000540428 GVQW1Q8N7I0 195 aa8.9□□□□□ -0.98
CBX3P4-202ENST00000540428 DMBX1Q8NFW5 382 aa8.9□□□□□ -0.98
CBX3P4-202ENST00000540428 RAB26Q9ULW5 256 aa8.9□□□□□ -0.98
CBX3P4-202ENST00000540428 SSR3Q9UNL2 185 aa8.9□□□□□ -0.98
CBX3P4-202ENST00000540428 TRAV18A0A075B6X5 111 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 OR2T8A6NH00 312 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 OR4C46A6NHA9 309 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 S1PR2O95136 353 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 PTHLHP12272 177 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 PSMB9P28065 219 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 CBX5P45973 191 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 WT1-ASQ06250 92 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 AADACL3Q5VUY0 350 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 SLC25A24Q6NUK1 477 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 ZNF818PQ6ZRF7 136 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 SPARTQ8N0X7 666 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 OR5AP2Q8NGF4 316 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 OR10W1Q8NGF6 305 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 OR1L8Q8NGR8 309 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 OR51H1Q8NH63 302 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 LSM10Q969L4 123 aaKnown RBP8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 SLC25A38Q96DW6 304 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 GALNT14Q96FL9 552 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 C21orf62Q9NYP8 219 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 UBQLN2Q9UHD9 624 aa8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 F11RQ9Y624 299 aaKnown RBP8.89□□□□□ -0.99
CBX3P4-202ENST00000540428 TEX50A0A1B0GTY4 177 aa8.88□□□□□ -0.99
CBX3P4-202ENST00000540428 MARCH11A6NNE9 402 aa8.88□□□□□ -0.99
CBX3P4-202ENST00000540428 C15orf62A8K5M9 175 aa8.88□□□□□ -0.99
CBX3P4-202ENST00000540428 TMEM127O75204 238 aa8.88□□□□□ -0.99
CBX3P4-202ENST00000540428 OR13C7P0DN81 318 aa8.88□□□□□ -0.99
CBX3P4-202ENST00000540428 SDC2P34741 201 aa8.88□□□□□ -0.99
CBX3P4-202ENST00000540428 CMC4P56277 68 aaPredicted RBP8.88□□□□□ -0.99
CBX3P4-202ENST00000540428 FXYD4P59646 89 aa8.88□□□□□ -0.99
CBX3P4-202ENST00000540428 ERVK-16P61578 105 aa8.88□□□□□ -0.99
CBX3P4-202ENST00000540428 OR5H6Q8NGV6 325 aa8.88□□□□□ -0.99
CBX3P4-202ENST00000540428 SCARB1Q8WTV0 552 aa8.88□□□□□ -0.99
CBX3P4-202ENST00000540428 C6orf62Q9GZU0 229 aaPredicted RBP8.88□□□□□ -0.99
CBX3P4-202ENST00000540428 AUNIPQ9H7T9 357 aa8.88□□□□□ -0.99
CBX3P4-202ENST00000540428 MAP6D1Q9H9H5 199 aa8.88□□□□□ -0.99
CBX3P4-202ENST00000540428 DIABLOQ9NR28 239 aa8.88□□□□□ -0.99
CBX3P4-202ENST00000540428 NDUFA4L2Q9NRX3 87 aa8.88□□□□□ -0.99
CBX3P4-202ENST00000540428 F8W735 103 aaPredicted RBP8.87□□□□□ -0.99
CBX3P4-202ENST00000540428 RPA2P15927 270 aa8.87□□□□□ -0.99
CBX3P4-202ENST00000540428 F2RP25116 425 aa8.87□□□□□ -0.99
CBX3P4-202ENST00000540428 GNRHRP30968 328 aa8.87□□□□□ -0.99
CBX3P4-202ENST00000540428 HERV-K104P61576 105 aa8.87□□□□□ -0.99
CBX3P4-202ENST00000540428 LGALS9CQ6DKI2 356 aa8.87□□□□□ -0.99
CBX3P4-202ENST00000540428 TMEM17Q86X19 198 aa8.87□□□□□ -0.99
CBX3P4-202ENST00000540428 CHRDL1Q9BU40 450 aa8.87□□□□□ -0.99
CBX3P4-202ENST00000540428 K7EIM0 57 aa8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 CTSDP07339 412 aaPredicted RBP8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 RPL35AP18077 110 aaKnown RBP8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 ADMP35318 185 aa8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 MFAP2P55001 183 aa8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 RELQ04864 619 aaPredicted RBP8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 MXD1Q05195 221 aa8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 IDNKQ5T6J7 187 aa8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 DHRS11Q6UWP2 260 aa8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 OR5B3Q8NH48 314 aa8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 GATAD1Q8WUU5 269 aa8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 PHLDA1Q8WV24 401 aaPredicted RBP8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 TMEM56Q96MV1 263 aa8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 C20orf24Q9BUV8 137 aa8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 YTHDF1Q9BYJ9 559 aaKnown RBP8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 FKBP11Q9NYL4 201 aa8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 SMPXQ9UHP9 88 aa8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 PRNDQ9UKY0 176 aa8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 OR51B2Q9Y5P1 312 aa8.86□□□□□ -0.99
CBX3P4-202ENST00000540428 PGLYRP1O75594 196 aaPredicted RBP8.85□□□□□ -0.99
CBX3P4-202ENST00000540428 SNAPC5O75971 98 aa8.85□□□□□ -0.99
CBX3P4-202ENST00000540428 RLN1P04808 185 aa8.85□□□□□ -0.99
CBX3P4-202ENST00000540428 CTSGP08311 255 aa8.85□□□□□ -0.99
CBX3P4-202ENST00000540428 CLEC2LP0C7M8 214 aa8.85□□□□□ -0.99
CBX3P4-202ENST00000540428 FCGR2BP31994 310 aaPredicted RBP8.85□□□□□ -0.99
CBX3P4-202ENST00000540428 Q56UQ5 140 aa8.85□□□□□ -0.99
CBX3P4-202ENST00000540428 UBAC2Q8NBM4 344 aa8.85□□□□□ -0.99
CBX3P4-202ENST00000540428 OR1P1Q8NH06 330 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms