RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 FAM74A3Q4VXF1 159 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 SPINK9Q5DT21 86 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 AVPI1Q5T686 147 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 ETFRF1Q6IPR1 90 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 C11orf42Q8N5U0 333 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 OR11H6Q8NGC7 330 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 RNASEH2CQ8TDP1 164 aaKnown RBP8.26□□□□□ -1.09
SPARC-209ENST00000539687 SLC35E1Q96K37 410 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 SRSF8Q9BRL6 282 aaKnown RBP8.26□□□□□ -1.09
SPARC-209ENST00000539687 C19orf24Q9BVV8 132 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 TUBA4BQ9H853 241 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 NDUFA4L2Q9NRX3 87 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 GNG13Q9P2W3 67 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 PRELID1Q9Y255 219 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 INSIG2Q9Y5U4 225 aa8.26□□□□□ -1.09
SPARC-209ENST00000539687 HECTD1Q9ULT8 2610 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 A6NNC1 897 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 B4DEV8 164 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 TSPAN4O14817 238 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 ENSAO43768 121 aaKnown RBP8.25□□□□□ -1.09
SPARC-209ENST00000539687 CA2P00918 260 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 SRP19P09132 144 aaKnown RBP8.25□□□□□ -1.09
SPARC-209ENST00000539687 IGFBP2P18065 325 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 HTR1DP28221 377 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 RPL29P47914 159 aaKnown RBP8.25□□□□□ -1.09
SPARC-209ENST00000539687 HNF4GQ14541 408 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 ICAM4Q14773 271 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 HAGHQ16775 308 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 UTF1Q5T230 341 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 CCDC144NLQ6NUI1 221 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 ACSM6Q6P461 480 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 ATRAIDQ6UW56 229 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 LCN15Q6UWW0 184 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 TREML4Q6UXN2 200 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 TMEM144Q7Z5S9 345 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 SLC35E3Q7Z769 313 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 C17orf50Q8WW18 174 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 NIPSNAP3BQ9BS92 247 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 HINT2Q9BX68 163 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 ONECUT1Q9UBC0 465 aa8.25□□□□□ -1.09
SPARC-209ENST00000539687 CACNA1DQ01668 2161 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 IGHV1-3A0A0C4DH29 117 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 A0A1B0GV50 99 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 SRRM4A7MD48 611 aaKnown RBP8.24□□□□□ -1.09
SPARC-209ENST00000539687 C9JQL5 133 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 LYNX1G3V0Z9 82 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 TMEM250H0YL14 139 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 M0R036 132 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 LYNX1P0DP58 116 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 PRTN3P24158 256 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 CCL20P78556 96 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 FAM122CQ6P4D5 195 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 RPP25LQ8N5L8 163 aaKnown RBP8.24□□□□□ -1.09
SPARC-209ENST00000539687 C15orf54Q8N8G6 183 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 RXFP4Q8TDU9 374 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 C22orf15Q8WYQ4 148 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 RNF2Q99496 336 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 GGTLC1Q9BX51 225 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 UBTD1Q9HAC8 227 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 LSM4Q9Y4Z0 139 aaKnown RBP8.24□□□□□ -1.09
SPARC-209ENST00000539687 PXMP4Q9Y6I8 212 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 POLEQ07864 2286 aa8.24□□□□□ -1.09
SPARC-209ENST00000539687 MGAQ8IWI9 3026 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 ZFP92A6NM28 416 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 CXorf1O96002 111 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 IGLV2-23P01705 113 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 OR13C7P0DN81 318 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 RNASE2P10153 161 aaKnown RBP8.23□□□□□ -1.09
SPARC-209ENST00000539687 NPBWR1P48145 328 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 REG1BP48304 166 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 B2MP61769 119 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 RHOBP62745 196 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 MEF2BQ02080 365 aaPredicted RBP8.23□□□□□ -1.09
SPARC-209ENST00000539687 CD69Q07108 199 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 ZNF726P1Q15940 193 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 SSX2Q16385 188 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 AWAT1Q58HT5 328 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 TPTE2P1Q5T6R2 138 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 MINOS1Q5TGZ0 78 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 MOB3BQ86TA1 216 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 PNKDQ8N490 385 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 ZNF114Q8NC26 417 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 OR4P4Q8NGL7 312 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 OR1L6Q8NGR2 347 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 RAB24Q969Q5 203 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 TVP23CQ96ET8 276 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 RARRES2Q99969 163 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 VSIRQ9H7M9 311 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 RPS10P5Q9NQ39 176 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 DPM3Q9P2X0 92 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 RFNGQ9Y644 331 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 MINOS1-NBL1R4GNA1 71 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 ARL2-SNX15V9GYD0 113 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 HCFC1P51610 2035 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 PLCE1Q9P212 2302 aa8.23□□□□□ -1.09
SPARC-209ENST00000539687 COL6A6A6NMZ7 2263 aa8.22□□□□□ -1.09
SPARC-209ENST00000539687 A0A087WWC5 75 aa8.22□□□□□ -1.09
SPARC-209ENST00000539687 C7orf77A4D0Y5 90 aa8.22□□□□□ -1.09
SPARC-209ENST00000539687 CXorf65A6NEN9 183 aa8.22□□□□□ -1.09
SPARC-209ENST00000539687 PDE6DO43924 150 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms