RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 PRCDQ00LT1 54 aa16.44■□□□□ 0.22
PACSIN3-211ENST00000539589 FLI1Q01543 452 aaPredicted RBP16.44■□□□□ 0.22
PACSIN3-211ENST00000539589 FLYWCH2Q96CP2 140 aaKnown RBP16.44■□□□□ 0.22
PACSIN3-211ENST00000539589 HARBI1Q96MB7 349 aa16.44■□□□□ 0.22
PACSIN3-211ENST00000539589 GOSR1O95249 250 aa16.43■□□□□ 0.22
PACSIN3-211ENST00000539589 REG1BP48304 166 aa16.43■□□□□ 0.22
PACSIN3-211ENST00000539589 TMEM177Q53S58 311 aa16.43■□□□□ 0.22
PACSIN3-211ENST00000539589 RAB24Q969Q5 203 aa16.43■□□□□ 0.22
PACSIN3-211ENST00000539589 TVP23CQ96ET8 276 aa16.43■□□□□ 0.22
PACSIN3-211ENST00000539589 NPVFQ9HCQ7 196 aa16.43■□□□□ 0.22
PACSIN3-211ENST00000539589 SPG11Q96JI7 2443 aa16.43■□□□□ 0.22
PACSIN3-211ENST00000539589 EIF3GO75821 320 aaKnown RBP eCLIP16.43■□□□□ 0.22
PACSIN3-211ENST00000539589 CA2P00918 260 aa16.43■□□□□ 0.22
PACSIN3-211ENST00000539589 MYOD1P15172 320 aa16.43■□□□□ 0.22
PACSIN3-211ENST00000539589 TAGLN2P37802 199 aaKnown RBP16.43■□□□□ 0.22
PACSIN3-211ENST00000539589 OPRK1P41145 380 aa16.43■□□□□ 0.22
PACSIN3-211ENST00000539589 ZNF137PP52743 207 aa16.43■□□□□ 0.22
PACSIN3-211ENST00000539589 SLC35E3Q7Z769 313 aa16.43■□□□□ 0.22
PACSIN3-211ENST00000539589 OR5B3Q8NH48 314 aa16.43■□□□□ 0.22
PACSIN3-211ENST00000539589 RAB1CQ92928 201 aa16.43■□□□□ 0.22
PACSIN3-211ENST00000539589 TEX50A0A1B0GTY4 177 aa16.42■□□□□ 0.22
PACSIN3-211ENST00000539589 HMGB3O15347 200 aaKnown RBP16.42■□□□□ 0.22
PACSIN3-211ENST00000539589 PDPNQ86YL7 162 aa16.42■□□□□ 0.22
PACSIN3-211ENST00000539589 OR4C13Q8NGP0 309 aa16.42■□□□□ 0.22
PACSIN3-211ENST00000539589 ST6GALNAC6Q969X2 333 aa16.42■□□□□ 0.22
PACSIN3-211ENST00000539589 NABP2Q9BQ15 211 aa16.42■□□□□ 0.22
PACSIN3-211ENST00000539589 CRYBA1P05813 215 aa16.41■□□□□ 0.22
PACSIN3-211ENST00000539589 IL3RAP26951 378 aa16.41■□□□□ 0.22
PACSIN3-211ENST00000539589 CDC34P49427 236 aaPredicted RBP16.41■□□□□ 0.22
PACSIN3-211ENST00000539589 PSMB3P49720 205 aa16.41■□□□□ 0.22
PACSIN3-211ENST00000539589 EFNA4P52798 201 aa16.41■□□□□ 0.22
PACSIN3-211ENST00000539589 ATP5IP56385 69 aaPredicted RBP16.41■□□□□ 0.22
PACSIN3-211ENST00000539589 C11orf42Q8N5U0 333 aa16.41■□□□□ 0.22
PACSIN3-211ENST00000539589 TIMD4Q96H15 378 aa16.41■□□□□ 0.22
PACSIN3-211ENST00000539589 PCGF1Q9BSM1 259 aa16.41■□□□□ 0.22
PACSIN3-211ENST00000539589 TMEM133Q9H2Q1 129 aa16.41■□□□□ 0.22
PACSIN3-211ENST00000539589 WDR25Q64LD2 544 aaPredicted RBP16.41■□□□□ 0.22
PACSIN3-211ENST00000539589 FAM90A2PQ658T7 463 aa16.41■□□□□ 0.22
PACSIN3-211ENST00000539589 MGST2Q99735 147 aa16.41■□□□□ 0.22
PACSIN3-211ENST00000539589 MANBALQ9NQG1 85 aa16.41■□□□□ 0.22
PACSIN3-211ENST00000539589 KCNIP2Q9NS61 270 aa16.41■□□□□ 0.22
PACSIN3-211ENST00000539589 MIOXQ9UGB7 285 aa16.41■□□□□ 0.22
PACSIN3-211ENST00000539589 A0A1W2PPH5 198 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 A1L4Q6 167 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 SEC14L6B5MCN3 397 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 MT-ND4LP03901 98 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 OPN1MWP04001 364 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 OPN1MW2P0DN77 364 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 OPN1MW3P0DN78 364 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 RAB13P51153 203 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 TGIF2LXQ8IUE1 241 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 VSTM2AQ8TAG5 236 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 NEIL1Q96FI4 390 aaPredicted RBP16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 TMPRSS5Q9H3S3 457 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 WASHC3Q9Y3C0 194 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 LSM4Q9Y4Z0 139 aaKnown RBP16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 TET2Q6N021 2002 aaPredicted RBP16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 MED13LQ71F56 2210 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 USF1P22415 310 aaPredicted RBP16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 MEF2BQ02080 365 aaPredicted RBP16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 DIAPH2-AS1Q14236 149 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 ARSJQ5FYB0 599 aaPredicted RBP16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 OR4A5Q8NH83 315 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 TNFRSF14Q92956 283 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 HIST1H2BAQ96A08 127 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 ISOC2Q96AB3 205 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 GGTLC1Q9BX51 225 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 COMMD5Q9GZQ3 224 aa16.4■□□□□ 0.22
PACSIN3-211ENST00000539589 FNDC10F2Z333 226 aa16.39■□□□□ 0.21
PACSIN3-211ENST00000539589 FOLR2P14207 255 aa16.39■□□□□ 0.21
PACSIN3-211ENST00000539589 MC5RP33032 325 aa16.39■□□□□ 0.21
PACSIN3-211ENST00000539589 RPL8P62917 257 aaKnown RBP16.39■□□□□ 0.21
PACSIN3-211ENST00000539589 RAB31Q13636 194 aa16.39■□□□□ 0.21
PACSIN3-211ENST00000539589 TEPPQ6URK8 271 aa16.39■□□□□ 0.21
PACSIN3-211ENST00000539589 OR8B3Q8NGG8 313 aa16.39■□□□□ 0.21
PACSIN3-211ENST00000539589 OR8B2Q96RD0 313 aa16.39■□□□□ 0.21
PACSIN3-211ENST00000539589 PXMP4Q9Y6I8 212 aa16.39■□□□□ 0.21
PACSIN3-211ENST00000539589 TENM4Q6N022 2769 aa16.39■□□□□ 0.21
PACSIN3-211ENST00000539589 A0A087WWC5 75 aa16.38■□□□□ 0.21
PACSIN3-211ENST00000539589 A0A1W2PPE2 198 aa16.38■□□□□ 0.21
PACSIN3-211ENST00000539589 A0A1W2PPV4 95 aa16.38■□□□□ 0.21
PACSIN3-211ENST00000539589 PATZ1Q9HBE1 687 aaKnown RBP16.38■□□□□ 0.21
PACSIN3-211ENST00000539589 USP9YO00507 2555 aaPredicted RBP16.38■□□□□ 0.21
PACSIN3-211ENST00000539589 OR2C1O95371 312 aa16.38■□□□□ 0.21
PACSIN3-211ENST00000539589 FBN2P35556 2912 aa16.38■□□□□ 0.21
PACSIN3-211ENST00000539589 GPR6P46095 362 aaPredicted RBP16.38■□□□□ 0.21
PACSIN3-211ENST00000539589 CD81P60033 236 aa16.38■□□□□ 0.21
PACSIN3-211ENST00000539589 RNF212Q495C1 297 aa16.38■□□□□ 0.21
PACSIN3-211ENST00000539589 SMUG1Q53HV7 270 aa16.38■□□□□ 0.21
PACSIN3-211ENST00000539589 IQCF2Q8IXL9 164 aa16.38■□□□□ 0.21
PACSIN3-211ENST00000539589 OR1L8Q8NGR8 309 aa16.38■□□□□ 0.21
PACSIN3-211ENST00000539589 CENPEQ02224 2701 aa16.37■□□□□ 0.21
PACSIN3-211ENST00000539589 B4DEV8 164 aa16.37■□□□□ 0.21
PACSIN3-211ENST00000539589 NDUFS6O75380 124 aaKnown RBP16.37■□□□□ 0.21
PACSIN3-211ENST00000539589 YIF1AO95070 293 aa16.37■□□□□ 0.21
PACSIN3-211ENST00000539589 IGHV4-39P01824 125 aa16.37■□□□□ 0.21
PACSIN3-211ENST00000539589 PRRX1P54821 245 aa16.37■□□□□ 0.21
PACSIN3-211ENST00000539589 PNRC1Q12796 327 aaPredicted RBP16.37■□□□□ 0.21
PACSIN3-211ENST00000539589 TMEM249Q2WGJ8 235 aa16.37■□□□□ 0.21
PACSIN3-211ENST00000539589 C2orf83Q53S99 150 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms