RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 RPL31P62899 125 aaKnown RBP10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 MSMO1Q15800 293 aa10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 MRPL54Q6P161 138 aaKnown RBP10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 C1orf229Q6ZS94 237 aaPredicted RBP10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 LRRC29Q8WV35 223 aa10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 UHRF2Q96PU4 802 aa10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 FBXL7Q9UJT9 491 aa10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 PRR33A8MZF0 331 aa10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 BRS3P32247 399 aa10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 TPTE2P1Q5T6R2 138 aa10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 MOB3BQ86TA1 216 aa10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 RPRMLQ8N4K4 120 aa10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 Q8TCH9 128 aa10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 RCHY1Q96PM5 261 aa10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 MS4A5Q9H3V2 200 aa10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 IGHV3OR15-7A0A075B7D8 119 aa10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 AHRRA9YTQ3 701 aa10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 HOXC12P31275 282 aa10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 ZNF134P52741 427 aa10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 RPL39P5Q59GN2 51 aa10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 C11orf42Q8N5U0 333 aa10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 Q8N7P7 452 aa10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 GCM1Q9NP62 436 aa10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 SERTAD4Q9NUC0 356 aa10.37□□□□□ -0.75
SFSWAP-208ENST00000539506 KIR2DL5BA0A0G2JN68 375 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 KIR2DL5BA0A0G2JPC4 375 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 SIAH2O43255 324 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 PRDX2P32119 198 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 MBNL2Q5VZF2 373 aaKnown RBP10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 LCN12Q6JVE5 192 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 KIR2DL5AQ8N109 375 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 C1orf162Q8NEQ5 155 aaPredicted RBP10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 OR2Z1Q8NG97 314 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 OR5AU1Q8NGC0 362 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 LRFN3Q9BTN0 628 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 ZNF718Q3SXZ3 478 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 TMEM144Q7Z5S9 345 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 LHFPL4Q7Z7J7 247 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 ST6GALNAC3Q8NDV1 305 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 OR4P4Q8NGL7 312 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 HCFC1P51610 2035 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 OR10J4P0C629 311 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 TPPP2P59282 170 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 DEFB109BQ30KR1 87 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 PRAMEF5Q5TYX0 476 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 NAT8BQ9UHF3 227 aa10.36□□□□□ -0.75
SFSWAP-208ENST00000539506 TACC2O95359 2948 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 TRAV17A0A0B4J275 112 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 C17orf112F2Z3M2 114 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 RAB29O14966 203 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 TYMSP04818 313 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 AMTP48728 403 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 CATR1Q13166 79 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 SMIM21Q3B7S5 101 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 FAM90A1Q86YD7 464 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 ZNRF1Q8ND25 227 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 FAM216AQ8WUB2 273 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 R3HDM4Q96D70 268 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 SSBP3Q9BWW4 388 aaPredicted RBP10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 GNB4Q9HAV0 340 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 DUSP13Q9UII6 198 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 SLC25A15Q9Y619 301 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 ZNF292O60281 2723 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 MGST1P10620 155 aaKnown RBP10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 HTD2P86397 168 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 MLANAQ16655 118 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 FAM201AQ5SY85 155 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 TREML4Q6UXN2 200 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 GCSAMQ8N6F7 178 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 SGK494Q96LW2 274 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 CIB3Q96Q77 187 aaPredicted RBP10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 MGST2Q99735 147 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 MIEN1Q9BRT3 115 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 TIMM9Q9Y5J7 89 aa10.35□□□□□ -0.75
SFSWAP-208ENST00000539506 DIRC3C9JPN6 131 aa10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 IGHV3-48P01763 117 aa10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 CRYBB3P26998 211 aa10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 DUTP33316 252 aaKnown RBP10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 HINT1P49773 126 aaPredicted RBP10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 BHLHA15Q7RTS1 189 aaPredicted RBP10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 SIGLECL1Q8N7X8 197 aa10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 SARAFQ96BY9 339 aa10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 DNAJC4Q9NNZ3 241 aa10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 TBL2Q9Y4P3 447 aaKnown RBP10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 SELENOKQ9Y6D0 94 aa10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 ZNF891A8MT65 544 aaPredicted RBP10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 VENTXO95231 258 aa10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 LOXL3P58215 753 aa10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 RPP30P78346 268 aaKnown RBP10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 VWC2Q2TAL6 325 aa10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 MORN2Q502X0 79 aa10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 C22orf34Q6ZV56 151 aa10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 STPG4Q8N801 248 aa10.34□□□□□ -0.75
SFSWAP-208ENST00000539506 SRRM5B3KS81 715 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 RAB7AP51149 207 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 ZNF83P51522 516 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 LCN2P80188 198 aa10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 DUX4L9Q6RFH8 374 aaPredicted RBP10.33□□□□□ -0.76
SFSWAP-208ENST00000539506 ZNF474Q6S9Z5 364 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms