RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 PAIP2BQ9ULR5 123 aaKnown RBP12.31□□□□□ -0.44
VAMP1-207ENST00000539047 STRAPQ9Y3F4 350 aaKnown RBP12.31□□□□□ -0.44
VAMP1-207ENST00000539047 ABCA1O95477 2261 aa12.31□□□□□ -0.44
VAMP1-207ENST00000539047 VPS13CQ709C8 3753 aa12.3□□□□□ -0.44
VAMP1-207ENST00000539047 ACANP16112 2415 aa12.3□□□□□ -0.44
VAMP1-207ENST00000539047 TEX50A0A1B0GTY4 177 aa12.3□□□□□ -0.44
VAMP1-207ENST00000539047 KANTRA0A1W2PQU2 76 aa12.3□□□□□ -0.44
VAMP1-207ENST00000539047 FGF16O43320 207 aa12.3□□□□□ -0.44
VAMP1-207ENST00000539047 CA2P00918 260 aa12.3□□□□□ -0.44
VAMP1-207ENST00000539047 IFNA10P01566 189 aa12.3□□□□□ -0.44
VAMP1-207ENST00000539047 OPN1MWP04001 364 aa12.3□□□□□ -0.44
VAMP1-207ENST00000539047 OPN1MW2P0DN77 364 aa12.3□□□□□ -0.44
VAMP1-207ENST00000539047 OPN1MW3P0DN78 364 aa12.3□□□□□ -0.44
VAMP1-207ENST00000539047 SNCAP37840 140 aa12.3□□□□□ -0.44
VAMP1-207ENST00000539047 COMPP49747 757 aaPredicted RBP12.3□□□□□ -0.44
VAMP1-207ENST00000539047 BAXQ07812 192 aa12.3□□□□□ -0.44
VAMP1-207ENST00000539047 SPANXN5Q5MJ07 72 aa12.3□□□□□ -0.44
VAMP1-207ENST00000539047 SSMEM1Q8WWF3 244 aa12.3□□□□□ -0.44
VAMP1-207ENST00000539047 ARL6Q9H0F7 186 aa12.3□□□□□ -0.44
VAMP1-207ENST00000539047 MDFIC2A0A1B0GVS7 189 aa12.29□□□□□ -0.44
VAMP1-207ENST00000539047 H3BP45 60 aa12.29□□□□□ -0.44
VAMP1-207ENST00000539047 OR8U8P0C7N1 319 aa12.29□□□□□ -0.44
VAMP1-207ENST00000539047 SUB1P53999 127 aaKnown RBP eCLIP12.29□□□□□ -0.44
VAMP1-207ENST00000539047 ATP5IP56385 69 aaPredicted RBP12.29□□□□□ -0.44
VAMP1-207ENST00000539047 RAB11AP62491 216 aa12.29□□□□□ -0.44
VAMP1-207ENST00000539047 HBG1P69891 147 aa12.29□□□□□ -0.44
VAMP1-207ENST00000539047 HBG2P69892 147 aa12.29□□□□□ -0.44
VAMP1-207ENST00000539047 LY6EQ16553 131 aa12.29□□□□□ -0.44
VAMP1-207ENST00000539047 IL17RELQ6ZVW7 336 aa12.29□□□□□ -0.44
VAMP1-207ENST00000539047 TMEM219Q86XT9 240 aa12.29□□□□□ -0.44
VAMP1-207ENST00000539047 BCL6BQ8N143 479 aaPredicted RBP12.29□□□□□ -0.44
VAMP1-207ENST00000539047 C9orf62Q8N4C0 152 aa12.29□□□□□ -0.44
VAMP1-207ENST00000539047 SRSF12Q8WXF0 261 aaKnown RBP12.29□□□□□ -0.44
VAMP1-207ENST00000539047 SRSF8Q9BRL6 282 aaKnown RBP12.29□□□□□ -0.44
VAMP1-207ENST00000539047 NDUFA4L2Q9NRX3 87 aa12.29□□□□□ -0.44
VAMP1-207ENST00000539047 CDC42EP3Q9UKI2 254 aa12.29□□□□□ -0.44
VAMP1-207ENST00000539047 U3KQ87 197 aa12.29□□□□□ -0.44
VAMP1-207ENST00000539047 ZNF469Q96JG9 3925 aaPredicted RBP12.29□□□□□ -0.44
VAMP1-207ENST00000539047 A6NDX4 124 aa12.28□□□□□ -0.44
VAMP1-207ENST00000539047 HLA-DRB1P01911 266 aa12.28□□□□□ -0.44
VAMP1-207ENST00000539047 S100A11P31949 105 aa12.28□□□□□ -0.44
VAMP1-207ENST00000539047 HTR2BP41595 481 aa12.28□□□□□ -0.44
VAMP1-207ENST00000539047 EWSR1Q01844 656 aaKnown RBP eCLIP12.28□□□□□ -0.44
VAMP1-207ENST00000539047 PJVKQ0ZLH3 352 aa12.28□□□□□ -0.44
VAMP1-207ENST00000539047 FXYD3Q14802 87 aa12.28□□□□□ -0.44
VAMP1-207ENST00000539047 CLEC9AQ6UXN8 241 aa12.28□□□□□ -0.44
VAMP1-207ENST00000539047 Q6YL49 198 aa12.28□□□□□ -0.44
VAMP1-207ENST00000539047 KCNRGQ8N5I3 272 aa12.28□□□□□ -0.44
VAMP1-207ENST00000539047 Q8N9W7 124 aa12.28□□□□□ -0.44
VAMP1-207ENST00000539047 SLC24A4Q8NFF2 622 aa12.28□□□□□ -0.44
VAMP1-207ENST00000539047 ARPC1AQ92747 370 aa12.28□□□□□ -0.44
VAMP1-207ENST00000539047 PLSCR3Q9NRY6 295 aa12.28□□□□□ -0.44
VAMP1-207ENST00000539047 FLNAP21333 2647 aaKnown RBP12.28□□□□□ -0.44
VAMP1-207ENST00000539047 RNF222A6NCQ9 220 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 FAM24AA6NFZ4 105 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 TAAR5O14804 337 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 CYB5BO43169 146 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 IGHV4-59P01825 116 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 HKR1P10072 659 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 NPY1RP25929 384 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 IER3P46695 156 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 SULT1A1P50225 295 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 TMEM267Q0VDI3 215 aaPredicted RBP12.27□□□□□ -0.45
VAMP1-207ENST00000539047 C10orf55Q5SWW7 151 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 ZNF562Q6V9R5 426 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 TMUB2Q71RG4 321 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 LILRB2Q8N423 598 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 TMEM252Q8N6L7 170 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 C5orf56Q8N8D9 126 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 ARPC5LQ9BPX5 153 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 C11orf1Q9H5F2 150 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 VPREB3Q9UKI3 123 aa12.27□□□□□ -0.45
VAMP1-207ENST00000539047 SOX21Q9Y651 276 aaPredicted RBP12.27□□□□□ -0.45
VAMP1-207ENST00000539047 INS-IGF2F8WCM5 200 aa12.26□□□□□ -0.45
VAMP1-207ENST00000539047 KCNAB3O43448 404 aa12.26□□□□□ -0.45
VAMP1-207ENST00000539047 BCL2L11O43521 198 aa12.26□□□□□ -0.45
VAMP1-207ENST00000539047 TSPAN9O75954 239 aa12.26□□□□□ -0.45
VAMP1-207ENST00000539047 LY6G6DO95868 133 aa12.26□□□□□ -0.45
VAMP1-207ENST00000539047 MYOD1P15172 320 aa12.26□□□□□ -0.45
VAMP1-207ENST00000539047 SRD5A1P18405 259 aa12.26□□□□□ -0.45
VAMP1-207ENST00000539047 CXCL2P19875 107 aa12.26□□□□□ -0.45
VAMP1-207ENST00000539047 VDAC2P45880 294 aaPredicted RBP12.26□□□□□ -0.45
VAMP1-207ENST00000539047 EIF5AP63241 154 aaKnown RBP12.26□□□□□ -0.45
VAMP1-207ENST00000539047 LGALSLQ3ZCW2 172 aaPredicted RBP12.26□□□□□ -0.45
VAMP1-207ENST00000539047 OR1S2Q8NGQ3 325 aa12.26□□□□□ -0.45
VAMP1-207ENST00000539047 PIFOQ8TCI5 191 aa12.26□□□□□ -0.45
VAMP1-207ENST00000539047 PINX1Q96BK5 328 aaKnown RBP12.26□□□□□ -0.45
VAMP1-207ENST00000539047 TMUB1Q9BVT8 246 aa12.26□□□□□ -0.45
VAMP1-207ENST00000539047 BORCS7-ASMTA0A0B4J1R7 106 aa12.25□□□□□ -0.45
VAMP1-207ENST00000539047 IGSF23A1L1A6 192 aa12.25□□□□□ -0.45
VAMP1-207ENST00000539047 MSGN1A6NI15 193 aa12.25□□□□□ -0.45
VAMP1-207ENST00000539047 DFFBO76075 338 aa12.25□□□□□ -0.45
VAMP1-207ENST00000539047 TMEM50AO95807 157 aa12.25□□□□□ -0.45
VAMP1-207ENST00000539047 IFNA4P05014 189 aa12.25□□□□□ -0.45
VAMP1-207ENST00000539047 METTL15P1P0C7V9 234 aa12.25□□□□□ -0.45
VAMP1-207ENST00000539047 OR13C7P0DN81 318 aa12.25□□□□□ -0.45
VAMP1-207ENST00000539047 PAX9P55771 341 aa12.25□□□□□ -0.45
VAMP1-207ENST00000539047 CX3CL1P78423 397 aa12.25□□□□□ -0.45
VAMP1-207ENST00000539047 OPCMLQ14982 345 aa12.25□□□□□ -0.45
VAMP1-207ENST00000539047 TMEM86BQ8N661 226 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms