RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 TEX50A0A1B0GTY4 177 aa11.24□□□□□ -0.61
CD4-208ENST00000538827 H0YIZ8 118 aa11.24□□□□□ -0.61
CD4-208ENST00000538827 H3BP45 60 aa11.24□□□□□ -0.61
CD4-208ENST00000538827 FCN1O00602 326 aa11.24□□□□□ -0.61
CD4-208ENST00000538827 CHST1O43916 411 aa11.24□□□□□ -0.61
CD4-208ENST00000538827 MAS1LP35410 378 aa11.24□□□□□ -0.61
CD4-208ENST00000538827 NKX2-5P52952 324 aaPredicted RBP11.24□□□□□ -0.61
CD4-208ENST00000538827 HSPE1P61604 102 aaKnown RBP11.24□□□□□ -0.61
CD4-208ENST00000538827 ID3Q02535 119 aa11.24□□□□□ -0.61
CD4-208ENST00000538827 MRGPRG-AS1Q2M3A8 158 aa11.24□□□□□ -0.61
CD4-208ENST00000538827 ZNF429Q86V71 674 aa11.24□□□□□ -0.61
CD4-208ENST00000538827 C5orf56Q8N8D9 126 aa11.24□□□□□ -0.61
CD4-208ENST00000538827 OR5B3Q8NH48 314 aa11.24□□□□□ -0.61
CD4-208ENST00000538827 DTD1Q8TEA8 209 aa11.24□□□□□ -0.61
CD4-208ENST00000538827 DUX5Q96PT3 197 aa11.24□□□□□ -0.61
CD4-208ENST00000538827 ZC4H2Q9NQZ6 224 aa11.24□□□□□ -0.61
CD4-208ENST00000538827 PAIP2BQ9ULR5 123 aaKnown RBP11.24□□□□□ -0.61
CD4-208ENST00000538827 ZNF257Q9Y2Q1 563 aa11.24□□□□□ -0.61
CD4-208ENST00000538827 TNCP24821 2201 aa11.23□□□□□ -0.61
CD4-208ENST00000538827 ARPC5O15511 151 aa11.23□□□□□ -0.61
CD4-208ENST00000538827 APELAP0DMC3 54 aa11.23□□□□□ -0.61
CD4-208ENST00000538827 NUP62P37198 522 aaPredicted RBP11.23□□□□□ -0.61
CD4-208ENST00000538827 COMPP49747 757 aaPredicted RBP11.23□□□□□ -0.61
CD4-208ENST00000538827 EIF2B2P49770 351 aaKnown RBP11.23□□□□□ -0.61
CD4-208ENST00000538827 RPL23AP62750 156 aaKnown RBP11.23□□□□□ -0.61
CD4-208ENST00000538827 PRCDQ00LT1 54 aa11.23□□□□□ -0.61
CD4-208ENST00000538827 C16orf82Q7Z2V1 217 aa11.23□□□□□ -0.61
CD4-208ENST00000538827 NOXA1Q86UR1 476 aa11.23□□□□□ -0.61
CD4-208ENST00000538827 OR52E5Q8NH55 327 aa11.23□□□□□ -0.61
CD4-208ENST00000538827 SRSF12Q8WXF0 261 aaKnown RBP11.23□□□□□ -0.61
CD4-208ENST00000538827 HEYLQ9NQ87 328 aaPredicted RBP11.23□□□□□ -0.61
CD4-208ENST00000538827 PARP11Q9NR21 331 aa11.23□□□□□ -0.61
CD4-208ENST00000538827 PSENENQ9NZ42 101 aa11.23□□□□□ -0.61
CD4-208ENST00000538827 CACFD1Q9UGQ2 172 aa11.23□□□□□ -0.61
CD4-208ENST00000538827 PLXNB1O43157 2135 aa11.23□□□□□ -0.61
CD4-208ENST00000538827 A0A1W2PN81 502 aa11.22□□□□□ -0.61
CD4-208ENST00000538827 DNAJC9-AS1A6NH13 148 aa11.22□□□□□ -0.61
CD4-208ENST00000538827 E5RGE8 158 aa11.22□□□□□ -0.61
CD4-208ENST00000538827 FGF16O43320 207 aa11.22□□□□□ -0.61
CD4-208ENST00000538827 GPR137BO60478 399 aa11.22□□□□□ -0.61
CD4-208ENST00000538827 HLA-DRB1P01911 266 aa11.22□□□□□ -0.61
CD4-208ENST00000538827 SLC25A4P12235 298 aa11.22□□□□□ -0.61
CD4-208ENST00000538827 CHRNA7P36544 502 aa11.22□□□□□ -0.61
CD4-208ENST00000538827 CAV2P51636 162 aa11.22□□□□□ -0.61
CD4-208ENST00000538827 TMEM267Q0VDI3 215 aaPredicted RBP11.22□□□□□ -0.61
CD4-208ENST00000538827 FXYD3Q14802 87 aa11.22□□□□□ -0.61
CD4-208ENST00000538827 AARDQ4LEZ3 155 aa11.22□□□□□ -0.61
CD4-208ENST00000538827 OR11H4Q8NGC9 324 aa11.22□□□□□ -0.61
CD4-208ENST00000538827 ARPC1AQ92747 370 aa11.22□□□□□ -0.61
CD4-208ENST00000538827 CIB3Q96Q77 187 aaPredicted RBP11.22□□□□□ -0.61
CD4-208ENST00000538827 RAB40CQ96S21 281 aa11.22□□□□□ -0.61
CD4-208ENST00000538827 FAM103A1Q9BTL3 118 aaKnown RBP11.22□□□□□ -0.61
CD4-208ENST00000538827 HIPK2Q9H2X6 1198 aa11.22□□□□□ -0.61
CD4-208ENST00000538827 M0QZK8 103 aa11.21□□□□□ -0.61
CD4-208ENST00000538827 KCNAB3O43448 404 aa11.21□□□□□ -0.61
CD4-208ENST00000538827 REG1AP05451 166 aa11.21□□□□□ -0.61
CD4-208ENST00000538827 AP2S1P53680 142 aaPredicted RBP11.21□□□□□ -0.61
CD4-208ENST00000538827 CX3CL1P78423 397 aa11.21□□□□□ -0.61
CD4-208ENST00000538827 NDPQ00604 133 aa11.21□□□□□ -0.61
CD4-208ENST00000538827 SPANXN5Q5MJ07 72 aa11.21□□□□□ -0.61
CD4-208ENST00000538827 ZNF546Q86UE3 836 aa11.21□□□□□ -0.61
CD4-208ENST00000538827 MRPL41Q8IXM3 137 aaKnown RBP11.21□□□□□ -0.61
CD4-208ENST00000538827 OR10W1Q8NGF6 305 aa11.21□□□□□ -0.61
CD4-208ENST00000538827 HYLS1Q96M11 299 aa11.21□□□□□ -0.61
CD4-208ENST00000538827 HSPB9Q9BQS6 159 aa11.21□□□□□ -0.61
CD4-208ENST00000538827 RNF126Q9BV68 326 aa11.21□□□□□ -0.61
CD4-208ENST00000538827 PRDM13Q9H4Q3 707 aa11.21□□□□□ -0.61
CD4-208ENST00000538827 IGHV7-81A0A0B4J1V7 117 aa11.2□□□□□ -0.62
CD4-208ENST00000538827 FAM24AA6NFZ4 105 aa11.2□□□□□ -0.62
CD4-208ENST00000538827 CGB1A6NKQ9 187 aa11.2□□□□□ -0.62
CD4-208ENST00000538827 E7EUB6 86 aa11.2□□□□□ -0.62
CD4-208ENST00000538827 TMEM50AO95807 157 aa11.2□□□□□ -0.62
CD4-208ENST00000538827 IFNA10P01566 189 aa11.2□□□□□ -0.62
CD4-208ENST00000538827 LYL1P12980 280 aa11.2□□□□□ -0.62
CD4-208ENST00000538827 VDAC2P45880 294 aaPredicted RBP11.2□□□□□ -0.62
CD4-208ENST00000538827 P2RY1P47900 373 aa11.2□□□□□ -0.62
CD4-208ENST00000538827 SSBP2P81877 361 aaPredicted RBP11.2□□□□□ -0.62
CD4-208ENST00000538827 ECSCRQ19T08 205 aa11.2□□□□□ -0.62
CD4-208ENST00000538827 ARSJQ5FYB0 599 aaPredicted RBP11.2□□□□□ -0.62
CD4-208ENST00000538827 INO80EQ8NBZ0 244 aaPredicted RBP11.2□□□□□ -0.62
CD4-208ENST00000538827 ZNF418Q8TF45 676 aaPredicted RBP11.2□□□□□ -0.62
CD4-208ENST00000538827 PPP1R14BQ96C90 147 aa11.2□□□□□ -0.62
CD4-208ENST00000538827 C11orf1Q9H5F2 150 aa11.2□□□□□ -0.62
CD4-208ENST00000538827 NDUFA4L2Q9NRX3 87 aa11.2□□□□□ -0.62
CD4-208ENST00000538827 A0A1B0GW64 132 aa11.19□□□□□ -0.62
CD4-208ENST00000538827 IGSF23A1L1A6 192 aa11.19□□□□□ -0.62
CD4-208ENST00000538827 MSGN1A6NI15 193 aa11.19□□□□□ -0.62
CD4-208ENST00000538827 TEX22C9J3V5 150 aa11.19□□□□□ -0.62
CD4-208ENST00000538827 ATP6V0E1O15342 81 aa11.19□□□□□ -0.62
CD4-208ENST00000538827 TSC22D2O75157 780 aa11.19□□□□□ -0.62
CD4-208ENST00000538827 OR8U8P0C7N1 319 aa11.19□□□□□ -0.62
CD4-208ENST00000538827 OR13C7P0DN81 318 aa11.19□□□□□ -0.62
CD4-208ENST00000538827 RPL12P30050 165 aaKnown RBP11.19□□□□□ -0.62
CD4-208ENST00000538827 ERHP84090 104 aaKnown RBP11.19□□□□□ -0.62
CD4-208ENST00000538827 PDLIM3Q53GG5 364 aaPredicted RBP11.19□□□□□ -0.62
CD4-208ENST00000538827 OR2C3Q8N628 320 aa11.19□□□□□ -0.62
CD4-208ENST00000538827 TMEM86BQ8N661 226 aa11.19□□□□□ -0.62
CD4-208ENST00000538827 SLC24A4Q8NFF2 622 aa11.19□□□□□ -0.62
CD4-208ENST00000538827 SMIM8Q96KF7 97 aa11.19□□□□□ -0.62
CD4-208ENST00000538827 OR4C12Q96R67 309 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms