RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 LINC01565O15544 149 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 RAMP3O60896 148 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 GCHFRP30047 84 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 ZNF816Q0VGE8 651 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-209ENST00000538654 VAMP3Q15836 100 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 GCSAMLQ5JQS6 135 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 Q6P435 159 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 RNASEKQ6P5S7 137 aaKnown RBP7.51□□□□□ -1.21
SNHG1-209ENST00000538654 BHLHA15Q7RTS1 189 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-209ENST00000538654 MUC15Q8N387 334 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 OR2M7Q8NG81 312 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 VPS25Q9BRG1 176 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 CHRDL1Q9BU40 450 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 WNT10AQ9GZT5 417 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 OSTCQ9NRP0 149 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 KMT2EQ8IZD2 1858 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 CCL3P10147 92 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 CCNOP22674 350 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 GNG4P50150 75 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 RHOGP84095 191 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 LRRC10Q5BKY1 277 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 ZNF439Q8NDP4 499 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 TSKUQ8WUA8 353 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 MCRIP2Q9BUT9 160 aaKnown RBP7.51□□□□□ -1.21
SNHG1-209ENST00000538654 OR2D2Q9H210 308 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 MRPS17Q9Y2R5 130 aaKnown RBP7.51□□□□□ -1.21
SNHG1-209ENST00000538654 YTHDF2Q9Y5A9 579 aaKnown RBP7.51□□□□□ -1.21
SNHG1-209ENST00000538654 ABCA7Q8IZY2 2146 aa7.51□□□□□ -1.21
SNHG1-209ENST00000538654 J3QT63 122 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 LINC00869P0C866 280 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 SRIP30626 198 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 SSR4P51571 173 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 NXPH1P58417 271 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 IGFBP7Q16270 282 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 RASL11AQ6T310 242 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 RPS19BP1Q86WX3 136 aaKnown RBP7.5□□□□□ -1.21
SNHG1-209ENST00000538654 SCCPDHQ8NBX0 429 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 ZNF488Q96MN9 340 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 RCHY1Q96PM5 261 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 RARRES3Q9UL19 164 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 IGHV1OR15-9A0A0B4J2B8 117 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 A0A1W2PRS3 328 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 C5orf49A4QMS7 147 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 SS18L1O75177 396 aaPredicted RBP7.5□□□□□ -1.21
SNHG1-209ENST00000538654 NEURL1O76050 574 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 TOX4O94842 621 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 APCSP02743 223 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 TMPRSS3P57727 454 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 FHL3Q13643 280 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 GALMQ96C23 342 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 PROK2Q9HC23 129 aa7.5□□□□□ -1.21
SNHG1-209ENST00000538654 CBY3A6NI87 242 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 C9orf172C9J069 976 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 TEX22C9J3V5 150 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 G3V3Y1 287 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 BMPR1BO00238 502 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 ISLRO14498 428 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 WISP2O76076 250 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 EIF4EBP1Q13541 118 aaPredicted RBP7.49□□□□□ -1.21
SNHG1-209ENST00000538654 TIGITQ495A1 244 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 TREML4Q6UXN2 200 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 GGTLC1Q9BX51 225 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 CRIM1Q9NZV1 1036 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 TMEM89A2RUT3 159 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 CXCL13O43927 109 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 NTF3P20783 257 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 CLDN18P56856 261 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 B3GALT5-AS1P59052 145 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 HLA-BQ31612 363 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 OCIAD2Q56VL3 154 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 GGNQ86UU5 652 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 OR4F17Q8NGA8 305 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 LOXL4Q96JB6 756 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 LINC00470Q9BZP3 86 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 CST9LQ9H4G1 147 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 SH2D2AQ9NP31 389 aa7.49□□□□□ -1.21
SNHG1-209ENST00000538654 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.48□□□□□ -1.21
SNHG1-209ENST00000538654 H0YJW9 148 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 HSBP1O75506 76 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 OR2H2O95918 312 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 RPL30P62888 115 aaKnown RBP7.48□□□□□ -1.21
SNHG1-209ENST00000538654 RAB31Q13636 194 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 CENPWQ5EE01 88 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 FAM162BQ5T6X4 162 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 DEFB119Q8N690 84 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 TSTD1Q8NFU3 115 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 HSD17B10Q99714 261 aaKnown RBP7.48□□□□□ -1.21
SNHG1-209ENST00000538654 MGST2Q99735 147 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 CLEC7AQ9BXN2 247 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 HES4Q9HCC6 221 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 ZNF331Q9NQX6 463 aaPredicted RBP7.48□□□□□ -1.21
SNHG1-209ENST00000538654 POLDIP2Q9Y2S7 368 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 MKI67P46013 3256 aaKnown RBP7.48□□□□□ -1.21
SNHG1-209ENST00000538654 DNAH14Q0VDD8 3507 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 SMIM27A0A1W2PRY6 76 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 C17orf98A8MV24 154 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 K7ERU9 68 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 RRHO14718 337 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 GRPP07492 148 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 ARR3P36575 388 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms