RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 SAMD13Q5VXD3 122 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 DEFB132Q7Z7B7 95 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 ZDHHC23Q8IYP9 409 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 DRAM1Q8N682 238 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 OR1L1Q8NH94 360 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 PATE1Q8WXA2 126 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 SGCZQ96LD1 299 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 HSD17B10Q99714 261 aaKnown RBP5.55□□□□□ -1.52
USP28-207ENST00000538475 DERL1Q9BUN8 251 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 LRRC61Q9BV99 259 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 OR2H1Q9GZK4 316 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 METTL7AQ9H8H3 244 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 NPVFQ9HCQ7 196 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 HSPB8Q9UJY1 196 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 PPIAL4AQ9Y536 164 aa5.55□□□□□ -1.52
USP28-207ENST00000538475 TRAV34A0A0B4J273 112 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 A0A1W2PQF6 199 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 ODAMA1E959 279 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 FAM231BA6NCW3 169 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 C15orf62A8K5M9 175 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 B4DGG1 531 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 F2Z2F3 143 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 C5orf67F2Z3F1 127 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 SYS1-DBNDD2H3BUS1 97 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 K7EP34 96 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 ZNF207O43670 478 aaKnown RBP5.54□□□□□ -1.52
USP28-207ENST00000538475 SMPD2O60906 423 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 NXPH3O95157 252 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 IGLV3-19P01714 112 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 HBZP02008 142 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 CRYAAP02489 173 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 COX8AP10176 69 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 GPR183P32249 361 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 TAS2R45P59539 299 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 PSG7Q13046 419 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 EIF4EBP1Q13541 118 aaPredicted RBP5.54□□□□□ -1.52
USP28-207ENST00000538475 CT83Q5H943 113 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 TRAT1Q6PIZ9 186 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 ZNF497Q6ZNH5 498 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 FA2HQ7L5A8 372 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 H2BFWTQ7Z2G1 175 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 OR9G4Q8NGQ1 327 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 MBD6Q96DN6 1003 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 RCHY1Q96PM5 261 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 TRIB1Q96RU8 372 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 SIGMAR1Q99720 223 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 SCRT2Q9NQ03 307 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 TNFRSF19Q9NS68 423 aa5.54□□□□□ -1.52
USP28-207ENST00000538475 C19orf25Q9UFG5 118 aaPredicted RBP5.54□□□□□ -1.52
USP28-207ENST00000538475 LSM4Q9Y4Z0 139 aaKnown RBP5.54□□□□□ -1.52
USP28-207ENST00000538475 CACNA1DQ01668 2161 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 TRGV8A0A0C4DH27 118 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 IGHV5-51A0A0C4DH38 117 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 C7orf71A4D174 169 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 OR2T8A6NH00 312 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 SLC17A3O00476 420 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 TNFSF12O43508 249 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 SS18L1O75177 396 aaPredicted RBP5.53□□□□□ -1.52
USP28-207ENST00000538475 NEURL1O76050 574 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 ZNF32P17041 273 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 NTF3P20783 257 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 KIR2DS2P43631 304 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 LGALS7P47929 136 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 DSCR4P56555 118 aaPredicted RBP5.53□□□□□ -1.52
USP28-207ENST00000538475 RAC3P60763 192 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 GNG3P63215 75 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 MRPL49Q13405 166 aaKnown RBP5.53□□□□□ -1.52
USP28-207ENST00000538475 TNXAQ16473 311 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 Q56UQ5 140 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 TMEM97Q5BJF2 176 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 CENPWQ5EE01 88 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 TCTEX1D4Q5JR98 221 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 IBA57Q5T440 356 aaKnown RBP5.53□□□□□ -1.52
USP28-207ENST00000538475 EBLN2Q6P2I7 272 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 ANKRD37Q7Z713 158 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 BPIFA4PQ86YQ2 179 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 PLXDC1Q8IUK5 500 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 OR4X2Q8NGF9 303 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 OR1B1Q8NGR6 318 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 NDFIP1Q9BT67 221 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 GGTLC1Q9BX51 225 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 MAP1LC3CQ9BXW4 147 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 MRPL32Q9BYC8 188 aaKnown RBP5.53□□□□□ -1.52
USP28-207ENST00000538475 DLL3Q9NYJ7 618 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 TECRQ9NZ01 308 aaKnown RBP5.53□□□□□ -1.52
USP28-207ENST00000538475 JKAMPQ9P055 326 aa5.53□□□□□ -1.52
USP28-207ENST00000538475 F5P12259 2224 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 TRAV24A0A0B4J272 114 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 MUC21A0A0G2JKD1 596 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 MUC21A0A140T8X8 626 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 PSMB11A5LHX3 300 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 C21orf140B9A014 251 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 PRSS46E5RG02 174 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 J3QT63 122 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 ZG16O60844 167 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 LEPROTL1O95214 131 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 CT45A6P0DMU7 189 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 CT45A5P0DMU8 189 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 CT45A7P0DMV0 189 aa5.52□□□□□ -1.53
USP28-207ENST00000538475 HIST1H1EP10412 219 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms