RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 ZIC4Q8N9L1 334 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 KIR2DL4Q99706 377 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 TBL2Q9Y4P3 447 aaKnown RBP9.42□□□□□ -0.9
LINC00346-201ENST00000538077 TCF21O43680 179 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 CLDND2Q8NHS1 167 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 GTF3AQ92664 365 aaKnown RBP9.42□□□□□ -0.9
LINC00346-201ENST00000538077 AICDAQ9GZX7 198 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 ANKRD36A6QL64 1941 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 A0A0G2JMZ2 1700 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 RTN4RL2Q86UN3 420 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 POC1AQ8NBT0 407 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 SPSB4Q96A44 273 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 LEPROTL1O95214 131 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 TRGC1P0CF51 173 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 GNG5P63218 68 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 ZNF415Q09FC8 603 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 C21orf62Q9NYP8 219 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 A0A0G2JK05 382 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 CIRBPQ14011 172 aaKnown RBP9.41□□□□□ -0.9
LINC00346-201ENST00000538077 NRN1LQ496H8 165 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 PLPPR1Q8TBJ4 325 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 SFRP2Q96HF1 295 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 C7orf66A4D0T2 115 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 STAG3L2P0CL84 134 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 CD33P20138 364 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 MALP21145 153 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 UBE2DNLQ8IWF7 75 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 IFI27L2Q9H2X8 130 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 A0A0G2JLM5 398 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 GTSCR1Q86UQ5 136 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 SMIM8Q96KF7 97 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 IFITM3Q01628 133 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 VMO1Q7Z5L0 202 aa9.41□□□□□ -0.9
LINC00346-201ENST00000538077 RND3P61587 244 aa9.4□□□□□ -0.9
LINC00346-201ENST00000538077 SRSF7Q16629 238 aaKnown RBP eCLIP9.4□□□□□ -0.9
LINC00346-201ENST00000538077 ZNF585BQ52M93 769 aa9.4□□□□□ -0.9
LINC00346-201ENST00000538077 NPCDR1Q9BY65 106 aa9.4□□□□□ -0.9
LINC00346-201ENST00000538077 MRPL32Q9BYC8 188 aaKnown RBP9.4□□□□□ -0.9
LINC00346-201ENST00000538077 PPP1R3EQ9H7J1 279 aa9.4□□□□□ -0.9
LINC00346-201ENST00000538077 SCO2A0A1W2PP80 73 aa9.4□□□□□ -0.9
LINC00346-201ENST00000538077 PCP4P48539 62 aa9.4□□□□□ -0.9
LINC00346-201ENST00000538077 H2BFSP57053 126 aa9.4□□□□□ -0.9
LINC00346-201ENST00000538077 FXYD7P58549 80 aa9.4□□□□□ -0.9
LINC00346-201ENST00000538077 SLC17A3O00476 420 aa9.4□□□□□ -0.9
LINC00346-201ENST00000538077 TM4SF5O14894 197 aa9.4□□□□□ -0.9
LINC00346-201ENST00000538077 SAP30O75446 220 aa9.4□□□□□ -0.9
LINC00346-201ENST00000538077 SAA1P0DJI8 122 aaPredicted RBP9.4□□□□□ -0.9
LINC00346-201ENST00000538077 RIPPLY3P57055 190 aa9.4□□□□□ -0.9
LINC00346-201ENST00000538077 MIR17HGQ75NE6 70 aa9.4□□□□□ -0.9
LINC00346-201ENST00000538077 IMMP1LQ96LU5 166 aa9.4□□□□□ -0.9
LINC00346-201ENST00000538077 MRPL14Q6P1L8 145 aaKnown RBP9.4□□□□□ -0.91
LINC00346-201ENST00000538077 CDC42EP3Q9UKI2 254 aa9.4□□□□□ -0.91
LINC00346-201ENST00000538077 IQCF6A8MYZ5 107 aa9.4□□□□□ -0.91
LINC00346-201ENST00000538077 SNAI2O43623 268 aa9.4□□□□□ -0.91
LINC00346-201ENST00000538077 NDUFA3O95167 84 aa9.4□□□□□ -0.91
LINC00346-201ENST00000538077 FOXA3P55318 350 aaPredicted RBP9.4□□□□□ -0.91
LINC00346-201ENST00000538077 Q71RC1 249 aaPredicted RBP9.4□□□□□ -0.91
LINC00346-201ENST00000538077 NRIP2Q9BQI9 281 aa9.4□□□□□ -0.91
LINC00346-201ENST00000538077 TMEM70Q9BUB7 260 aa9.4□□□□□ -0.91
LINC00346-201ENST00000538077 MYOFQ9NZM1 2061 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 TMEM14DPA8MWL7 114 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 CD7P09564 240 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 ZP1P60852 638 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 ALKBH7Q9BT30 221 aaPredicted RBP9.39□□□□□ -0.91
LINC00346-201ENST00000538077 C1QTNF5Q9BXJ0 243 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 PRSS22Q9GZN4 317 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 MGAMO43451 1857 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 AGAP20933 346 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 GFI1BQ5VTD9 330 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 STPG2Q8N412 459 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 NPFFR1Q9GZQ6 430 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 SDF2L1Q9HCN8 221 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 TMEM238LA0A1B0GVL6 79 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 A6NJY4 79 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 NBR2O15453 112 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 COX6CP09669 75 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 FAM209AQ5JX71 171 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 SCN8AQ9UQD0 1980 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 A0A087WV48 116 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 PEX7O00628 323 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 Q5BKY6 102 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 CHRNA10Q9GZZ6 450 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 UNQ6494/PRO21346Q6UXR6 183 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 OR10S1Q8NGN2 331 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 FGFBP3Q8TAT2 258 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 LYZL4Q96KX0 146 aa9.39□□□□□ -0.91
LINC00346-201ENST00000538077 RALGAPA2Q2PPJ7 1873 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 RAMP3O60896 148 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 ZNF660Q6AZW8 331 aaPredicted RBP9.38□□□□□ -0.91
LINC00346-201ENST00000538077 BRD3OSQ6XYD6 125 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 OR5AN1Q8NGI8 311 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 PTPRFP10586 1907 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 IGHV3-73A0A0B4J1V6 119 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 FAM90A26D6RGX4 464 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 FBLN7Q53RD9 439 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 C8orf46Q8TAG6 207 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 CFDP00746 253 aaPredicted RBP9.38□□□□□ -0.91
LINC00346-201ENST00000538077 RPL35AP18077 110 aaKnown RBP9.38□□□□□ -0.91
LINC00346-201ENST00000538077 RAB9AP51151 201 aa9.38□□□□□ -0.91
LINC00346-201ENST00000538077 MAPK1IP1LQ8NDC0 245 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms