RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 TGFAP01135 160 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 FOXC1Q12948 553 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 LINC01559Q495D7 138 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 MPV17L2Q567V2 206 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 SIGLEC12Q96PQ1 595 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 SMPXQ9UHP9 88 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 MPC1Q9Y5U8 109 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 WIPF2Q8TF74 440 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-213ENST00000537002 PERPQ96FX8 193 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 ARID1BQ8NFD5 2236 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-213ENST00000537002 OR9G9P0C7N8 305 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 STAG3L3P0CL85 134 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 OR2Z1Q8NG97 314 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 OR9G4Q8NGQ1 327 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 ANAPC13Q9BS18 74 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 CLEC5AQ9NY25 188 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 SPRY3O43610 288 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 CGAP01215 116 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 LIPFP07098 398 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 CCL7P80098 99 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 SLC25A47Q6Q0C1 308 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 TMEM14EPQ6UXP3 125 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 STPG3Q8N7X2 389 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 C11orf52Q96A22 123 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 ZNF48Q96MX3 618 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-213ENST00000537002 RNASE7Q9H1E1 156 aaKnown RBP4.56□□□□□ -1.68
PTPRD-213ENST00000537002 GTSF1LQ9H1H1 148 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 ATP23Q9Y6H3 246 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 FAM90A9PA6NNJ1 464 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 A8MWL6 223 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 J3QT63 122 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 APELAP0DMC3 54 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 HBBP68871 147 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 OR1L1Q8NH94 360 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 ARRDC1-AS1Q9H2J1 176 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 CLEC1BQ9P126 229 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 DOCK8Q8NF50 2099 aa4.56□□□□□ -1.68
PTPRD-213ENST00000537002 FAM181BA6NEQ2 426 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 LRRC30A6NM36 301 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 LILRA1O75019 489 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 ORM1P02763 201 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 CKS1BP61024 79 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 ZNF645Q8N7E2 425 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 CHCHD1Q96BP2 118 aaKnown RBP4.55□□□□□ -1.68
PTPRD-213ENST00000537002 AREGP15514 252 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 FGF12P61328 243 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 PSG4Q00888 419 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 TWIST1Q15672 202 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 TNXAQ16473 311 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 MYOZ3Q8TDC0 251 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 LOC105371242A0A075B767 164 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 ZNF785A8K8V0 405 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 SPINT1O43278 529 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 OR2H2O95918 312 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 CA7P43166 264 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 GCSAMLQ5JQS6 135 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 ZNF502Q8TBZ5 544 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 TMEM186Q96B77 213 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 C5orf30Q96GV9 206 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 RASL10BQ96S79 203 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 CACNA1IQ9P0X4 2223 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 OR2T8A6NH00 312 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 LILRA5A6NI73 299 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 ANOS1P23352 680 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 TCTEX1D4Q5JR98 221 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 ABHD12Q8N2K0 398 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 FAM169BQ8N8A8 192 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 PRDM6Q9NQX0 595 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 A0A1W2PPC4 97 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 PGPA6NDG6 321 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 APOHP02749 345 aaPredicted RBP4.55□□□□□ -1.68
PTPRD-213ENST00000537002 CX3CL1P78423 397 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 C10orf128Q5T292 105 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 LCN12Q6JVE5 192 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 STXBP6Q8NFX7 210 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 KLRC4-KLRK1H3BQV0 150 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 K7ESF4 209 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 C3orf79P0CE67 100 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 HERVK_113P61574 105 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 VKORC1L1Q8N0U8 176 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 PLA2G2FQ9BZM2 168 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 PRNDQ9UKY0 176 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 TMEM189A5PLL7 270 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 IZUMO1RA6ND01 250 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 C3orf80F5H4A9 247 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 S100A4P26447 101 aaKnown RBP4.55□□□□□ -1.68
PTPRD-213ENST00000537002 Q6ZVH6 145 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 WFDC3Q8IUB2 231 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 ZIC4Q8N9L1 334 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 OR2M3Q8NG83 312 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 OR4X2Q8NGF9 303 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 ZNF257Q9Y2Q1 563 aa4.55□□□□□ -1.68
PTPRD-213ENST00000537002 COL4A2P08572 1712 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 F5H697 171 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 CLDN14O95500 239 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 IGLV3-1P01715 115 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 FTH1P19P0C7X4 201 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 TUSC5Q8IXB3 177 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 FAM131CQ96AQ9 280 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 KIAA1549LQ6ZVL6 1849 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms