RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 C4orf46Q504U0 113 aa13.81□□□□□ -0.2
TNFRSF1A-209ENST00000536717 OR4A47Q6IF82 309 aa13.81□□□□□ -0.2
TNFRSF1A-209ENST00000536717 PLET1Q6UQ28 207 aa13.81□□□□□ -0.2
TNFRSF1A-209ENST00000536717 PUSL1Q8N0Z8 303 aaKnown RBP13.81□□□□□ -0.2
TNFRSF1A-209ENST00000536717 MS4A10Q96PG2 267 aa13.81□□□□□ -0.2
TNFRSF1A-209ENST00000536717 TMEM140Q9NV12 185 aa13.81□□□□□ -0.2
TNFRSF1A-209ENST00000536717 BET1LQ9NYM9 111 aa13.81□□□□□ -0.2
TNFRSF1A-209ENST00000536717 PIGBOS1A0A0B4J2F0 54 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 ACTL6BO94805 426 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 KBTBD11O94819 623 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 SFT2D2O95562 160 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 IGKV1-39P01597 117 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 HLA-AP01891 365 aaKnown RBP13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 IGKV1D-39P04432 117 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 LGALS1P09382 135 aaKnown RBP13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 OR4E1P0C645 316 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 AKR1C2P52895 323 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 TMEM187Q14656 261 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 C9orf66Q5T8R8 295 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 MMD2Q8IY49 270 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 OR4A5Q8NH83 315 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 RBPMSQ93062 196 aaKnown RBP13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 SLA2Q9H6Q3 261 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 SEC14L6B5MCN3 397 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 PTTG1O95997 202 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 IGHV3-11P01762 117 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 TPPP2P59282 170 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 PRSS8Q16651 343 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 TMEM268Q5VZI3 342 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 H2BFWTQ7Z2G1 175 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 LGI3Q8N145 548 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 OR5T1Q8NG75 326 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 RNASE11Q8TAA1 199 aaKnown RBP13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 TMEM167AQ8TBQ9 72 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 RRNAD1Q96FB5 475 aaKnown RBP13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 SEC22AQ96IW7 307 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 TMEM56Q96MV1 263 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 ZNF430Q9H8G1 570 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 TMEM56-RWDD3S4R434 201 aa13.8□□□□□ -0.2
TNFRSF1A-209ENST00000536717 IGHV4OR15-8A0A075B7B6 117 aa13.79□□□□□ -0.2
TNFRSF1A-209ENST00000536717 A0A087WW49 117 aa13.79□□□□□ -0.2
TNFRSF1A-209ENST00000536717 C9orf170A2RU37 121 aa13.79□□□□□ -0.2
TNFRSF1A-209ENST00000536717 TRGV3P03979 118 aa13.79□□□□□ -0.2
TNFRSF1A-209ENST00000536717 DHRS2Q13268 280 aa13.79□□□□□ -0.2
TNFRSF1A-209ENST00000536717 CADM3Q8N126 398 aa13.79□□□□□ -0.2
TNFRSF1A-209ENST00000536717 DCUN1D4Q92564 292 aa13.79□□□□□ -0.2
TNFRSF1A-209ENST00000536717 IL22RA2Q969J5 263 aa13.79□□□□□ -0.2
TNFRSF1A-209ENST00000536717 LINC01619G3V211 115 aa13.78□□□□□ -0.2
TNFRSF1A-209ENST00000536717 SNAPC5O75971 98 aa13.78□□□□□ -0.2
TNFRSF1A-209ENST00000536717 MECP2P51608 486 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1A-209ENST00000536717 SLURP1P55000 103 aa13.78□□□□□ -0.2
TNFRSF1A-209ENST00000536717 RPL8P62917 257 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1A-209ENST00000536717 TNXAQ16473 311 aa13.78□□□□□ -0.2
TNFRSF1A-209ENST00000536717 LYG2Q86SG7 212 aa13.78□□□□□ -0.2
TNFRSF1A-209ENST00000536717 SELENOHQ8IZQ5 122 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1A-209ENST00000536717 LHFPL5Q8TAF8 219 aa13.78□□□□□ -0.2
TNFRSF1A-209ENST00000536717 DLX4Q92988 240 aaPredicted RBP13.78□□□□□ -0.2
TNFRSF1A-209ENST00000536717 TMEM68Q96MH6 324 aa13.78□□□□□ -0.2
TNFRSF1A-209ENST00000536717 PRR13Q9NZ81 148 aa13.78□□□□□ -0.2
TNFRSF1A-209ENST00000536717 H3BUA1 57 aa13.77□□□□□ -0.21
TNFRSF1A-209ENST00000536717 UPK2O00526 184 aa13.77□□□□□ -0.21
TNFRSF1A-209ENST00000536717 MAS1LP35410 378 aa13.77□□□□□ -0.21
TNFRSF1A-209ENST00000536717 SRSF12Q8WXF0 261 aaKnown RBP13.77□□□□□ -0.21
TNFRSF1A-209ENST00000536717 ZNF355PQ9NSJ1 428 aa13.77□□□□□ -0.21
TNFRSF1A-209ENST00000536717 INMT-MINDY4F8WBC2 141 aa13.76□□□□□ -0.21
TNFRSF1A-209ENST00000536717 OVOL1O14753 267 aa13.76□□□□□ -0.21
TNFRSF1A-209ENST00000536717 IGKV1-5P01602 117 aa13.76□□□□□ -0.21
TNFRSF1A-209ENST00000536717 IL6RP08887 468 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF1A-209ENST00000536717 FGF2P09038 288 aa13.76□□□□□ -0.21
TNFRSF1A-209ENST00000536717 APELAP0DMC3 54 aa13.76□□□□□ -0.21
TNFRSF1A-209ENST00000536717 RGS21Q2M5E4 152 aa13.76□□□□□ -0.21
TNFRSF1A-209ENST00000536717 ANKRD55Q3KP44 614 aa13.76□□□□□ -0.21
TNFRSF1A-209ENST00000536717 DEFB121Q5J5C9 76 aa13.76□□□□□ -0.21
TNFRSF1A-209ENST00000536717 FAM219AQ8IW50 185 aa13.76□□□□□ -0.21
TNFRSF1A-209ENST00000536717 SLC35G3Q8N808 338 aa13.76□□□□□ -0.21
TNFRSF1A-209ENST00000536717 COQ8AQ8NI60 647 aa13.76□□□□□ -0.21
TNFRSF1A-209ENST00000536717 ZMAT5Q9UDW3 170 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-209ENST00000536717 TRAV3A0A0B4J244 114 aa13.75□□□□□ -0.21
TNFRSF1A-209ENST00000536717 A0A0B4J2A0 478 aa13.75□□□□□ -0.21
TNFRSF1A-209ENST00000536717 DUXBA0A1W2PPF3 345 aa13.75□□□□□ -0.21
TNFRSF1A-209ENST00000536717 MSGN1A6NI15 193 aa13.75□□□□□ -0.21
TNFRSF1A-209ENST00000536717 BRI3O95415 125 aa13.75□□□□□ -0.21
TNFRSF1A-209ENST00000536717 HSPB1P04792 205 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-209ENST00000536717 OR9G9P0C7N8 305 aa13.75□□□□□ -0.21
TNFRSF1A-209ENST00000536717 HLA-GP17693 338 aa13.75□□□□□ -0.21
TNFRSF1A-209ENST00000536717 LRTM2Q8N967 370 aa13.75□□□□□ -0.21
TNFRSF1A-209ENST00000536717 OR4A16Q8NH70 328 aa13.75□□□□□ -0.21
TNFRSF1A-209ENST00000536717 MARVELD1Q9BSK0 173 aa13.75□□□□□ -0.21
TNFRSF1A-209ENST00000536717 COMMD5Q9GZQ3 224 aa13.75□□□□□ -0.21
TNFRSF1A-209ENST00000536717 SHPKQ9UHJ6 478 aa13.75□□□□□ -0.21
TNFRSF1A-209ENST00000536717 PRNDQ9UKY0 176 aa13.75□□□□□ -0.21
TNFRSF1A-209ENST00000536717 RBMXL2O75526 392 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 DHFRP00374 187 aa13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 DEFA5Q01523 94 aa13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 C10orf55Q5SWW7 151 aa13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 OR52B4Q8NGK2 314 aa13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 LSM10Q969L4 123 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 PHB2Q99623 299 aa13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 GPN1Q9HCN4 374 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 FKBP11Q9NYL4 201 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms