RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 SDF2L1Q9HCN8 221 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 ZANQ9Y493 2812 aa10.59□□□□□ -0.71
CDK5RAP3-202ENST00000536708 ZFP92A6NM28 416 aa10.58□□□□□ -0.72
CDK5RAP3-202ENST00000536708 IGKV1D-33P01593 117 aa10.58□□□□□ -0.72
CDK5RAP3-202ENST00000536708 IGKV1-33P01594 117 aa10.58□□□□□ -0.72
CDK5RAP3-202ENST00000536708 FABP4P15090 132 aa10.58□□□□□ -0.72
CDK5RAP3-202ENST00000536708 FOSL1P15407 271 aa10.58□□□□□ -0.72
CDK5RAP3-202ENST00000536708 DDTP30046 118 aa10.58□□□□□ -0.72
CDK5RAP3-202ENST00000536708 LTC4SQ16873 150 aa10.58□□□□□ -0.72
CDK5RAP3-202ENST00000536708 UTF1Q5T230 341 aa10.58□□□□□ -0.72
CDK5RAP3-202ENST00000536708 OR8G2PQ6IF36 304 aa10.58□□□□□ -0.72
CDK5RAP3-202ENST00000536708 SSX9Q7RTT3 188 aa10.58□□□□□ -0.72
CDK5RAP3-202ENST00000536708 OR5R1Q8NH85 324 aa10.58□□□□□ -0.72
CDK5RAP3-202ENST00000536708 RFESDQ8TAC1 157 aa10.58□□□□□ -0.72
CDK5RAP3-202ENST00000536708 NCOR1P1Q9H4R4 102 aa10.58□□□□□ -0.72
CDK5RAP3-202ENST00000536708 SLC39A9Q9NUM3 307 aa10.58□□□□□ -0.72
CDK5RAP3-202ENST00000536708 JPT1Q9UK76 154 aa10.58□□□□□ -0.72
CDK5RAP3-202ENST00000536708 IGHV3-43A0A0B4J1X8 118 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 CTXND1A0A1B0GTU2 59 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 LINC00473A8K010 186 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 PHOX2AO14813 284 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 YPEL1O60688 119 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 IGHV3-43DP0DP04 118 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 FGF8P55075 233 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 Q3ZCU0 254 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 PPP1R35Q8TAP8 253 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 H1FXQ92522 213 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 YPEL2Q96QA6 119 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 BPESC1Q9GZL8 116 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 CLN8Q9UBY8 286 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 GAB2Q9UQC2 676 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 CELSR1Q9NYQ6 3014 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 CCDC168Q8NDH2 2452 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 PDZD2O15018 2839 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 TSTD3H0UI37 97 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 CLDN34H7C241 214 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 SLC31A2O15432 143 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 RBFOX2O43251 390 aaKnown RBP eCLIP10.57□□□□□ -0.722e-11■□□□□ 9.3
CDK5RAP3-202ENST00000536708 DUTP33316 252 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 ATP5J2P56134 94 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 WDR25Q64LD2 544 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 ACSM6Q6P461 480 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 LHX4Q969G2 390 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 TIMD4Q96H15 378 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 PACRGQ96M98 296 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 CTDSP1Q9GZU7 261 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 FAM234AQ9H0X4 552 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 PRO1933Q9H354 126 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 KAAG1Q9UBP8 84 aa10.57□□□□□ -0.72
CDK5RAP3-202ENST00000536708 F2RL2O00254 374 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 ITGB1BP1O14713 200 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 ST8SIA5O15466 376 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 NDUFB3O43676 98 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 SOX15O60248 233 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 PROP1O75360 226 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 PAX1P15863 534 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 GPR6P46095 362 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 ELLP55199 621 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 MORN2Q502X0 79 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 PDLIM3Q53GG5 364 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 BTNL3Q6UXE8 466 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 ZNF841Q6ZN19 808 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 OR52E5Q8NH55 327 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 RAB1CQ92928 201 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 PSG11Q9UQ72 335 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 TRBV24-1A0A075B6N3 115 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 A0A087X0M5 115 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 A0A1B0GX30 115 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 SMCO3A2RU48 225 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 MARCH11A6NNE9 402 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 CEBPZOSA8MTT3 80 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 TMEM250H0YL14 139 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 HPRT1P00492 218 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 IGHV3-7P01780 117 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 CCL3L1P16619 93 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 TMEM249Q2WGJ8 235 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 LRRC10Q5BKY1 277 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 NCR3LG1Q68D85 454 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 ZDHHC16Q969W1 377 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 HIST1H2BLQ99880 126 aa10.56□□□□□ -0.72
CDK5RAP3-202ENST00000536708 OPN1MWP04001 364 aa10.55□□□□□ -0.72
CDK5RAP3-202ENST00000536708 OPN1MW2P0DN77 364 aa10.55□□□□□ -0.72
CDK5RAP3-202ENST00000536708 OPN1MW3P0DN78 364 aa10.55□□□□□ -0.72
CDK5RAP3-202ENST00000536708 FGF7P21781 194 aa10.55□□□□□ -0.72
CDK5RAP3-202ENST00000536708 GPR12P47775 334 aa10.55□□□□□ -0.72
CDK5RAP3-202ENST00000536708 TAS2R60P59551 318 aa10.55□□□□□ -0.72
CDK5RAP3-202ENST00000536708 RPL31P62899 125 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-202ENST00000536708 MEF2BQ02080 365 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-202ENST00000536708 R3HDM4Q96D70 268 aa10.55□□□□□ -0.72
CDK5RAP3-202ENST00000536708 NPCDR1Q9BY65 106 aa10.55□□□□□ -0.72
CDK5RAP3-202ENST00000536708 ACTR3CQ9C0K3 210 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-202ENST00000536708 MANBALQ9NQG1 85 aa10.55□□□□□ -0.72
CDK5RAP3-202ENST00000536708 CALYQ9NYX4 217 aa10.55□□□□□ -0.72
CDK5RAP3-202ENST00000536708 PITPNC1Q9UKF7 332 aa10.55□□□□□ -0.72
CDK5RAP3-202ENST00000536708 ITPR3Q14573 2671 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 C15orf62A8K5M9 175 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 C17orf112F2Z3M2 114 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 MMP23AO75900 390 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 CGB3P0DN86 165 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 CGB7P0DN87 165 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms