RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 TMPRSS2O15393 492 aa11.63□□□□□ -0.55
LIG1-203ENST00000536218 AGFG2O95081 481 aa11.63□□□□□ -0.55
LIG1-203ENST00000536218 PAX2Q02962 417 aa11.63□□□□□ -0.55
LIG1-203ENST00000536218 ZNF841Q6ZN19 808 aa11.63□□□□□ -0.55
LIG1-203ENST00000536218 FER1L6-AS1Q8NA97 138 aa11.63□□□□□ -0.55
LIG1-203ENST00000536218 DIDO1Q9BTC0 2240 aaKnown RBP11.63□□□□□ -0.55
LIG1-203ENST00000536218 GAGE10A6NGK3 116 aa11.63□□□□□ -0.55
LIG1-203ENST00000536218 IGHV1-2P23083 117 aa11.63□□□□□ -0.55
LIG1-203ENST00000536218 CA7P43166 264 aa11.63□□□□□ -0.55
LIG1-203ENST00000536218 MRPL54Q6P161 138 aaKnown RBP11.63□□□□□ -0.55
LIG1-203ENST00000536218 MKXQ8IYA7 352 aa11.63□□□□□ -0.55
LIG1-203ENST00000536218 TSKUQ8WUA8 353 aa11.63□□□□□ -0.55
LIG1-203ENST00000536218 RDH5Q92781 318 aa11.63□□□□□ -0.55
LIG1-203ENST00000536218 ICE1Q9Y2F5 2266 aa11.63□□□□□ -0.55
LIG1-203ENST00000536218 GATA2P23769 480 aaPredicted RBP11.63□□□□□ -0.55
LIG1-203ENST00000536218 ESPL1Q14674 2120 aa11.63□□□□□ -0.55
LIG1-203ENST00000536218 RPEL1Q2QD12 228 aa11.63□□□□□ -0.55
LIG1-203ENST00000536218 OR1B1Q8NGR6 318 aa11.63□□□□□ -0.55
LIG1-203ENST00000536218 NANOS1Q8WY41 292 aaKnown RBP11.63□□□□□ -0.55
LIG1-203ENST00000536218 ACACAQ13085 2346 aa11.63□□□□□ -0.55
LIG1-203ENST00000536218 TRAV17A0A0B4J275 112 aa11.62□□□□□ -0.55
LIG1-203ENST00000536218 LRP5LA4QPB2 252 aa11.62□□□□□ -0.55
LIG1-203ENST00000536218 RHBDL1O75783 438 aa11.62□□□□□ -0.55
LIG1-203ENST00000536218 LGALS4P56470 323 aa11.62□□□□□ -0.55
LIG1-203ENST00000536218 DAZAP2Q15038 168 aaPredicted RBP11.62□□□□□ -0.55
LIG1-203ENST00000536218 TMEM211Q6ICI0 200 aa11.62□□□□□ -0.55
LIG1-203ENST00000536218 FAM71F2Q6NXP2 309 aa11.62□□□□□ -0.55
LIG1-203ENST00000536218 CHRDL1Q9BU40 450 aa11.62□□□□□ -0.55
LIG1-203ENST00000536218 PIEZO2Q9H5I5 2752 aa11.62□□□□□ -0.55
LIG1-203ENST00000536218 HSBP1O75506 76 aa11.62□□□□□ -0.55
LIG1-203ENST00000536218 SELENOVP59797 346 aa11.62□□□□□ -0.55
LIG1-203ENST00000536218 ALKBH6Q3KRA9 238 aa11.62□□□□□ -0.55
LIG1-203ENST00000536218 BVES-AS1Q5T3Y7 98 aa11.62□□□□□ -0.55
LIG1-203ENST00000536218 C19orf35Q6ZS72 473 aa11.62□□□□□ -0.55
LIG1-203ENST00000536218 INTS1Q8N201 2190 aaKnown RBP11.61□□□□□ -0.55
LIG1-203ENST00000536218 CADP27708 2225 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 A0A1W2PPV4 95 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 NDUFS8O00217 210 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 FOXF2Q12947 444 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 TBC1D28Q2M2D7 210 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 IL1F10Q8WWZ1 152 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 FNDC4Q9H6D8 234 aaPredicted RBP11.61□□□□□ -0.55
LIG1-203ENST00000536218 IL36GQ9NZH8 169 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 PPP1R3CQ9UQK1 317 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 APC2O95996 2303 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 DEGS1O15121 323 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 RBPJQ06330 500 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 PSG7Q13046 419 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 FAM214BQ7L5A3 538 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 C9orf106Q8NAJ2 232 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 OR1L1Q8NH94 360 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 M0R2Z0 102 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 LGALS7P47929 136 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 GABRA6Q16445 453 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 DEFB125Q8N687 156 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 PRSS33Q8NF86 280 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 OR5A2Q8NGI9 324 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 CLEC5AQ9NY25 188 aa11.61□□□□□ -0.55
LIG1-203ENST00000536218 EDDM3BP56851 147 aa11.6□□□□□ -0.55
LIG1-203ENST00000536218 ARF6P62330 175 aa11.6□□□□□ -0.55
LIG1-203ENST00000536218 OR4S2Q8NH73 311 aa11.6□□□□□ -0.55
LIG1-203ENST00000536218 NAA38Q9BRA0 125 aaKnown RBP11.6□□□□□ -0.55
LIG1-203ENST00000536218 FZR1Q9UM11 496 aa11.6□□□□□ -0.55
LIG1-203ENST00000536218 CACNA1DQ01668 2161 aa11.6□□□□□ -0.55
LIG1-203ENST00000536218 MGST1P10620 155 aaKnown RBP11.6□□□□□ -0.55
LIG1-203ENST00000536218 SLC25A6P12236 298 aa11.6□□□□□ -0.55
LIG1-203ENST00000536218 FGF12P61328 243 aa11.6□□□□□ -0.55
LIG1-203ENST00000536218 SMAGPQ0VAQ4 97 aa11.6□□□□□ -0.55
LIG1-203ENST00000536218 FXYD3Q14802 87 aa11.6□□□□□ -0.55
LIG1-203ENST00000536218 OR10J3Q5JRS4 329 aa11.6□□□□□ -0.55
LIG1-203ENST00000536218 TAAR6Q96RI8 345 aa11.6□□□□□ -0.55
LIG1-203ENST00000536218 SFXN3Q9BWM7 321 aa11.6□□□□□ -0.55
LIG1-203ENST00000536218 KCNIP2Q9NS61 270 aa11.6□□□□□ -0.55
LIG1-203ENST00000536218 CLCF1Q9UBD9 225 aa11.6□□□□□ -0.55
LIG1-203ENST00000536218 TIMM9Q9Y5J7 89 aa11.6□□□□□ -0.55
LIG1-203ENST00000536218 C22orf46C9J442 243 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 NPY1RP25929 384 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 EBLN2Q6P2I7 272 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 UBALD1Q8TB05 177 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 GNB1LQ9BYB4 327 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 GTSF1LQ9H1H1 148 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 CUL9Q8IWT3 2517 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 hDV102S1A0JD36 115 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 G3V4G9 280 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 K7EN84 100 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 GRPP07492 148 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 GNG3P63215 75 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 HOXA4Q00056 320 aaPredicted RBP11.59□□□□□ -0.55
LIG1-203ENST00000536218 SPINK9Q5DT21 86 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 RNASEKQ6P5S7 137 aaKnown RBP11.59□□□□□ -0.55
LIG1-203ENST00000536218 CXorf67Q86X51 503 aaPredicted RBP11.59□□□□□ -0.55
LIG1-203ENST00000536218 C5orf17Q8NAS9 161 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 SLC25A40Q8TBP6 338 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 TMEM147Q9BVK8 224 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 GP6Q9HCN6 339 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 HEATR1Q9H583 2144 aaKnown RBP11.59□□□□□ -0.55
LIG1-203ENST00000536218 SS18L1O75177 396 aaPredicted RBP11.59□□□□□ -0.55
LIG1-203ENST00000536218 IGKV1-39P01597 117 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 IGKV1-5P01602 117 aa11.59□□□□□ -0.55
LIG1-203ENST00000536218 IGKV1D-39P04432 117 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms