RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 FXYD4P59646 89 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 EIF4EBP1Q13541 118 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 ODF3L2Q3SX64 289 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 Q56UQ5 140 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 AADACL3Q5VUY0 350 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 BEST4Q8NFU0 473 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 CD300LFQ8TDQ1 290 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 BORCS5Q969J3 196 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 HINT2Q9BX68 163 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 SLC5A7Q9GZV3 580 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 FBXL17Q9UF56 701 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 DAPK2Q9UIK4 370 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 KMT2AQ03164 3969 aa9.61□□□□□ -0.87
TNFRSF1A-207ENST00000535958 CGB1A6NKQ9 187 aa9.6□□□□□ -0.87
TNFRSF1A-207ENST00000535958 CTSDP07339 412 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF1A-207ENST00000535958 CMC4P56277 68 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF1A-207ENST00000535958 BRWD1-AS2P59051 145 aa9.6□□□□□ -0.87
TNFRSF1A-207ENST00000535958 RBMS2Q15434 407 aaKnown RBP9.6□□□□□ -0.87
TNFRSF1A-207ENST00000535958 TMEM17Q86X19 198 aa9.6□□□□□ -0.87
TNFRSF1A-207ENST00000535958 TSPAN14Q8NG11 270 aa9.6□□□□□ -0.87
TNFRSF1A-207ENST00000535958 OR51H1Q8NH63 302 aa9.6□□□□□ -0.87
TNFRSF1A-207ENST00000535958 LGALS14Q8TCE9 139 aa9.6□□□□□ -0.87
TNFRSF1A-207ENST00000535958 GATAD1Q8WUU5 269 aa9.6□□□□□ -0.87
TNFRSF1A-207ENST00000535958 CMTM3Q96MX0 182 aa9.6□□□□□ -0.87
TNFRSF1A-207ENST00000535958 RARRES2Q99969 163 aa9.6□□□□□ -0.87
TNFRSF1A-207ENST00000535958 KRTAP17-1Q9BYP8 105 aa9.6□□□□□ -0.87
TNFRSF1A-207ENST00000535958 VCX3BQ9H321 246 aa9.6□□□□□ -0.87
TNFRSF1A-207ENST00000535958 MAP6D1Q9H9H5 199 aa9.6□□□□□ -0.87
TNFRSF1A-207ENST00000535958 C21orf62Q9NYP8 219 aa9.6□□□□□ -0.87
TNFRSF1A-207ENST00000535958 COMMD9Q9P000 198 aa9.6□□□□□ -0.87
TNFRSF1A-207ENST00000535958 IGHV3-21A0A0B4J1V1 117 aa9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 MPTX1A8MV57 137 aa9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 ZNF207O43670 478 aaKnown RBP9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 SSX5O60225 188 aa9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 S1PR2O95136 353 aa9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 EIF4EP06730 217 aaKnown RBP9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 FCGR2BP31994 310 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 HERV-K104P61576 105 aa9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 RELQ04864 619 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 APRG1Q8IVJ8 170 aa9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 OR10W1Q8NGF6 305 aa9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 OR1L8Q8NGR8 309 aa9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 C11orf45Q8TAV5 145 aa9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 LSM10Q969L4 123 aaKnown RBP9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 CNBD2Q96M20 576 aa9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 ATP6V0BQ99437 205 aa9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 CSTL1Q9H114 145 aa9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 PLEKHA2Q9HB19 425 aa9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 RHBDL2Q9NX52 303 aa9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 RRP15Q9Y3B9 282 aaKnown RBP9.59□□□□□ -0.87
TNFRSF1A-207ENST00000535958 IGHV3OR16-8A0A075B7F1 116 aa9.58□□□□□ -0.88
TNFRSF1A-207ENST00000535958 TRAV3A0A0B4J244 114 aa9.58□□□□□ -0.88
TNFRSF1A-207ENST00000535958 C15orf62A8K5M9 175 aa9.58□□□□□ -0.88
TNFRSF1A-207ENST00000535958 K7EMT4 169 aa9.58□□□□□ -0.88
TNFRSF1A-207ENST00000535958 SNAPC5O75971 98 aa9.58□□□□□ -0.88
TNFRSF1A-207ENST00000535958 YIF1AO95070 293 aa9.58□□□□□ -0.88
TNFRSF1A-207ENST00000535958 SERPINE2P07093 398 aa9.58□□□□□ -0.88
TNFRSF1A-207ENST00000535958 FGF2P09038 288 aa9.58□□□□□ -0.88
TNFRSF1A-207ENST00000535958 TFPI2P48307 235 aa9.58□□□□□ -0.88
TNFRSF1A-207ENST00000535958 POU2AF1Q16633 256 aa9.58□□□□□ -0.88
TNFRSF1A-207ENST00000535958 SFXN4Q6P4A7 337 aa9.58□□□□□ -0.88
TNFRSF1A-207ENST00000535958 TPRA1Q86W33 373 aa9.58□□□□□ -0.88
TNFRSF1A-207ENST00000535958 NR2C2APQ86WQ0 139 aa9.58□□□□□ -0.88
TNFRSF1A-207ENST00000535958 CENPSQ8N2Z9 138 aa9.58□□□□□ -0.88
TNFRSF1A-207ENST00000535958 F11RQ9Y624 299 aaKnown RBP9.58□□□□□ -0.88
TNFRSF1A-207ENST00000535958 IGKV3-7A0A075B6H7 116 aa9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 TRAV18A0A075B6X5 111 aa9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 MARCH11A6NNE9 402 aa9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 NUPL2O15504 423 aaKnown RBP9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 MRPS14O60783 128 aaKnown RBP9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 PSMB9P28065 219 aa9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 HSPA13P48723 471 aa9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 NANOS2P60321 138 aaKnown RBP9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 PAFAH1B2P68402 229 aa9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 ZNF818PQ6ZRF7 136 aa9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 HOGA1Q86XE5 327 aa9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 GVQW1Q8N7I0 195 aa9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 TMEM116Q8NCL8 245 aa9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 C2CD4CQ8TF44 421 aa9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 TMEM56Q96MV1 263 aa9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 CHRDL1Q9BU40 450 aa9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 C11orf68Q9H3H3 251 aaKnown RBP9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 IFT46Q9NQC8 304 aa9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 TXNL4BQ9NX01 149 aaKnown RBP9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 SSR3Q9UNL2 185 aa9.57□□□□□ -0.88
TNFRSF1A-207ENST00000535958 IGHV7-4-1A0A0J9YVY3 117 aa9.56□□□□□ -0.88
TNFRSF1A-207ENST00000535958 TEX50A0A1B0GTY4 177 aa9.56□□□□□ -0.88
TNFRSF1A-207ENST00000535958 CA1P00915 261 aaPredicted RBP9.56□□□□□ -0.88
TNFRSF1A-207ENST00000535958 RLN1P04808 185 aa9.56□□□□□ -0.88
TNFRSF1A-207ENST00000535958 FCER2P06734 321 aa9.56□□□□□ -0.88
TNFRSF1A-207ENST00000535958 PTHLHP12272 177 aa9.56□□□□□ -0.88
TNFRSF1A-207ENST00000535958 CBX5P45973 191 aa9.56□□□□□ -0.88
TNFRSF1A-207ENST00000535958 TCTAP57738 103 aa9.56□□□□□ -0.88
TNFRSF1A-207ENST00000535958 WT1-ASQ06250 92 aa9.56□□□□□ -0.88
TNFRSF1A-207ENST00000535958 OR11H2Q8NH07 326 aa9.56□□□□□ -0.88
TNFRSF1A-207ENST00000535958 SCARB1Q8WTV0 552 aa9.56□□□□□ -0.88
TNFRSF1A-207ENST00000535958 RHPN1-AS1Q9BWJ2 59 aa9.56□□□□□ -0.88
TNFRSF1A-207ENST00000535958 DIABLOQ9NR28 239 aa9.56□□□□□ -0.88
TNFRSF1A-207ENST00000535958 OR51B2Q9Y5P1 312 aa9.56□□□□□ -0.88
TNFRSF1A-207ENST00000535958 ETV7Q9Y603 341 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms