RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 ZNF436Q9C0F3 470 aaPredicted RBP7.55□□□□□ -1.2
CLSTN3-203ENST00000534830 FXYD6Q9H0Q3 95 aa7.55□□□□□ -1.2
CLSTN3-203ENST00000534830 HIPK2Q9H2X6 1198 aa7.55□□□□□ -1.2
CLSTN3-203ENST00000534830 TUBA4BQ9H853 241 aa7.55□□□□□ -1.2
CLSTN3-203ENST00000534830 PLEKHA3Q9HB20 300 aa7.55□□□□□ -1.2
CLSTN3-203ENST00000534830 RETNQ9HD89 108 aa7.55□□□□□ -1.2
CLSTN3-203ENST00000534830 NDUFA4L2Q9NRX3 87 aa7.55□□□□□ -1.2
CLSTN3-203ENST00000534830 MLXQ9UH92 298 aa7.55□□□□□ -1.2
CLSTN3-203ENST00000534830 MARCH11A6NNE9 402 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 TNFAIP8O95379 198 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 EIF4EP06730 217 aaKnown RBP7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 SERPINE2P07093 398 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 DEFA4P12838 97 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 PRSS3P35030 304 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 TAS2R46P59540 309 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 HERV-K104P61576 105 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 WT1-ASQ06250 92 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 FAM106AQ4KMX7 169 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 AADACL3Q5VUY0 350 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 UNQ9165/PRO28630Q6UXU0 137 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 RPP25LQ8N5L8 163 aaKnown RBP7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 DEFB125Q8N687 156 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 DMBX1Q8NFW5 382 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 OR10W1Q8NGF6 305 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 DYNLRB2Q8TF09 96 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 FCAMRQ8WWV6 532 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 CACNG8Q8WXS5 425 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 DGCR14Q96DF8 476 aaKnown RBP7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 WDR89Q96FK6 387 aaPredicted RBP7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 QTRT1Q9BXR0 403 aaKnown RBP7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 COMMD5Q9GZQ3 224 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 FAM212BQ9NTI7 297 aaPredicted RBP7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 SLC2A8Q9NY64 477 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 CEPT1Q9Y6K0 416 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 DNAH10Q8IVF4 4471 aa7.54□□□□□ -1.2
CLSTN3-203ENST00000534830 OR11H12B2RN74 326 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 F8W735 103 aaPredicted RBP7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 GPR31O00270 319 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 TPPPO94811 219 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 APOA1P02647 267 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 RLN1P04808 185 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 TRAPPC2P0DI81 140 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 TRAPPC2BP0DI82 140 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 HRH1P35367 487 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 LPAR6P43657 344 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 MFAP2P55001 183 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 ELLP55199 621 aaPredicted RBP7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 TM4SF20Q53R12 229 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 ZNF57Q68EA5 555 aaPredicted RBP7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 HSD17B13Q7Z5P4 300 aaPredicted RBP7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 TMEM61Q8N0U2 210 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 GDPD1Q8N9F7 314 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 UXS1Q8NBZ7 420 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 OR1L8Q8NGR8 309 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 OR5H2Q8NGV7 314 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 VN1R17PQ8TDU5 208 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 ZNF414Q96IQ9 312 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 ATP6V0BQ99437 205 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 FUNDC2Q9BWH2 189 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 WFDC10AQ9H1F0 79 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 THYN1Q9P016 225 aa7.53□□□□□ -1.2
CLSTN3-203ENST00000534830 TGOLN2O43493 480 aa7.52□□□□□ -1.21
CLSTN3-203ENST00000534830 OR13C7P0DN81 318 aa7.52□□□□□ -1.21
CLSTN3-203ENST00000534830 RPA2P15927 270 aa7.52□□□□□ -1.21
CLSTN3-203ENST00000534830 HLA-DMAP28067 261 aa7.52□□□□□ -1.21
CLSTN3-203ENST00000534830 G6PCP35575 357 aa7.52□□□□□ -1.21
CLSTN3-203ENST00000534830 UCP3P55916 312 aa7.52□□□□□ -1.21
CLSTN3-203ENST00000534830 VBP1P61758 197 aa7.52□□□□□ -1.21
CLSTN3-203ENST00000534830 NCS1P62166 190 aa7.52□□□□□ -1.21
CLSTN3-203ENST00000534830 CMTM1Q8IZ96 169 aa7.52□□□□□ -1.21
CLSTN3-203ENST00000534830 OR6F1Q8NGZ6 308 aa7.52□□□□□ -1.21
CLSTN3-203ENST00000534830 MARC2Q969Z3 335 aa7.52□□□□□ -1.21
CLSTN3-203ENST00000534830 SRD5A3Q9H8P0 318 aa7.52□□□□□ -1.21
CLSTN3-203ENST00000534830 SCPEP1Q9HB40 452 aa7.52□□□□□ -1.21
CLSTN3-203ENST00000534830 VCX3AQ9NNX9 186 aa7.52□□□□□ -1.21
CLSTN3-203ENST00000534830 TMEM14BQ9NUH8 114 aa7.52□□□□□ -1.21
CLSTN3-203ENST00000534830 MRPL27Q9P0M9 148 aaKnown RBP7.52□□□□□ -1.21
CLSTN3-203ENST00000534830 F11RQ9Y624 299 aaKnown RBP7.52□□□□□ -1.21
CLSTN3-203ENST00000534830 TRAV25A0A0B4J276 109 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 ZNF320A2RRD8 509 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 DBX1A6NMT0 343 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 KRASP01116 189 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 IGKV1-39P01597 117 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 IGKV1D-39P04432 117 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 ELK1P19419 428 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 GPR183P32249 361 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 ERVK-16P61578 105 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 GUCA2BQ16661 112 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 LPCAT3Q6P1A2 487 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 PLET1Q6UQ28 207 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 LSM10Q969L4 123 aaKnown RBP7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 BSCL2Q96G97 398 aaPredicted RBP7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 SEC22AQ96IW7 307 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 COMMD3Q9UBI1 195 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 NSG2Q9Y328 171 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 OR51B2Q9Y5P1 312 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 SELENOKQ9Y6D0 94 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 MUC4Q99102 2169 aa7.51□□□□□ -1.21
CLSTN3-203ENST00000534830 SMIM31A0A1B0GVY4 71 aa7.5□□□□□ -1.21
CLSTN3-203ENST00000534830 OR2T8A6NH00 312 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms