RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 OR2J2O76002 312 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 MT-ND4P03905 459 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 IFNW1P05000 195 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 IL3P08700 152 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 OR5H8P0DN80 308 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 CCL3P10147 92 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 SCGB1A1P11684 91 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 TPT1P13693 172 aaKnown RBP2.51□□□□□ -2.01
USP48-215ENST00000534705 PPIBP23284 216 aaKnown RBP2.51□□□□□ -2.01
USP48-215ENST00000534705 HSD11B1P28845 292 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 APLNRP35414 380 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 PPICP45877 212 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 CYB561P49447 251 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 DAP3P51398 398 aaKnown RBP2.51□□□□□ -2.01
USP48-215ENST00000534705 SSR4P51571 173 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 FGF8P55075 233 aaPredicted RBP2.51□□□□□ -2.01
USP48-215ENST00000534705 RND3P61587 244 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 PAX2Q02962 417 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 ZNF85Q03923 595 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 ZNF763Q0D2J5 394 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 ATP6V1FQ16864 119 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 BSXQ3C1V8 233 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 TMEM176BQ3YBM2 270 aaPredicted RBP2.51□□□□□ -2.01
USP48-215ENST00000534705 TRMT12Q53H54 448 aaKnown RBP2.51□□□□□ -2.01
USP48-215ENST00000534705 OR2G6Q5TZ20 316 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 TNFAIP8L2Q6P589 184 aaPredicted RBP2.51□□□□□ -2.01
USP48-215ENST00000534705 TEX43Q6ZNM6 134 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 SLC25A48Q6ZT89 311 aaKnown RBP2.51□□□□□ -2.01
USP48-215ENST00000534705 C20orf196Q8IYI0 205 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 FAM24BQ8N5W8 94 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 TPRX1Q8N7U7 411 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 LRRC75AQ8NAA5 344 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 ACBD4Q8NC06 268 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 OR10H4Q8NGA5 316 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 OR4D6Q8NGJ1 314 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 OR51A7Q8NH64 312 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 TMEM239Q8WW34 195 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 ASB17Q8WXJ9 295 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 CACNG8Q8WXS5 425 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 RGP1Q92546 391 aaPredicted RBP2.51□□□□□ -2.01
USP48-215ENST00000534705 PACRGQ96M98 296 aaPredicted RBP2.51□□□□□ -2.01
USP48-215ENST00000534705 AQP10Q96PS8 301 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 OR52E6Q96RD3 313 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 RNF2Q99496 336 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 ATP5SQ99766 215 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 GINS4Q9BRT9 223 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 FAAP24Q9BTP7 215 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 RNF126Q9BV68 326 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 SUCNR1Q9BXA5 334 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 RSPO3Q9BXY4 272 aaPredicted RBP2.51□□□□□ -2.01
USP48-215ENST00000534705 EBPLQ9BY08 206 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 FXYD6Q9H0Q3 95 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 ZDHHC11Q9H8X9 412 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 WFDC1Q9HC57 220 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 TMEM242Q9NWH2 141 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 DNAJC27Q9NZQ0 273 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 MRPL27Q9P0M9 148 aaKnown RBP2.51□□□□□ -2.01
USP48-215ENST00000534705 MTFP1Q9UDX5 166 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 PSG11Q9UQ72 335 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 KLF13Q9Y2Y9 288 aaPredicted RBP2.51□□□□□ -2.01
USP48-215ENST00000534705 WIF1Q9Y5W5 379 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 OTOGQ6ZRI0 2925 aa2.51□□□□□ -2.01
USP48-215ENST00000534705 TRAV9-2A0A087WT02 112 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 A0A0A6YYH2 397 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 A0A0B4J2A0 478 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 A6NJ64 397 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 OR5B21A6NL26 309 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 C17orf51A8MQB3 221 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 CEACAM18A8MTB9 384 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 PPP5D1E7EU14 171 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 G3V3Y1 287 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 FAAHO00519 579 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 GOSR2O14653 212 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 SIVA1O15304 175 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 CDC40O60508 579 aaKnown RBP eCLIP2.5□□□□□ -2.01
USP48-215ENST00000534705 TNFSF13O75888 250 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 CST4P01036 141 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 C1QCP02747 245 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 IFI6P09912 130 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 UCHL1P09936 223 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 ATF1P18846 271 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 CSNK2A2P19784 350 aaPredicted RBP2.5□□□□□ -2.01
USP48-215ENST00000534705 ZBTB25P24278 435 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 CFHR2P36980 270 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 SNCAP37840 140 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 CA7P43166 264 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 LPAR6P43657 344 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 DNASE1L1P49184 302 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 P2RX1P51575 399 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 HNRNPA3P51991 378 aaKnown RBP2.5□□□□□ -2.01
USP48-215ENST00000534705 AKR1C2P52895 323 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 NDUFA6P56556 154 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 FBXW4P57775 412 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 TAS2R19P59542 299 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 UBE2G2P60604 165 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 HBA1P69905 142 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 AKR1C1Q04828 323 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 OR5I1Q13606 314 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 RGNQ15493 299 aa2.5□□□□□ -2.01
USP48-215ENST00000534705 C5orf64Q2M2E5 130 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms